RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 ADGRL1O94910 1474 aa18.55■□□□□ 0.56
CDK5RAP2-217ENST00000484546 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
CDK5RAP2-217ENST00000484546 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
CDK5RAP2-217ENST00000484546 RAPGEF3O95398 923 aa18.54■□□□□ 0.56
CDK5RAP2-217ENST00000484546 POGZQ7Z3K3 1410 aa18.51■□□□□ 0.55
CDK5RAP2-217ENST00000484546 ZMYM4Q5VZL5 1548 aa18.51■□□□□ 0.55
CDK5RAP2-217ENST00000484546 EFCAB2Q5VUJ9 269 aa18.51■□□□□ 0.55
CDK5RAP2-217ENST00000484546 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
CDK5RAP2-217ENST00000484546 SCAPERQ9BY12 1400 aa18.49■□□□□ 0.55
CDK5RAP2-217ENST00000484546 APLP2Q06481 763 aa18.49■□□□□ 0.55
CDK5RAP2-217ENST00000484546 ABCC1P33527 1531 aa18.49■□□□□ 0.55
CDK5RAP2-217ENST00000484546 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
CDK5RAP2-217ENST00000484546 SUPT6HQ7KZ85 1726 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP2-217ENST00000484546 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
CDK5RAP2-217ENST00000484546 ITSN2Q9NZM3 1697 aa18.46■□□□□ 0.55
CDK5RAP2-217ENST00000484546 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
CDK5RAP2-217ENST00000484546 ZFYVE16Q7Z3T8 1539 aa18.44■□□□□ 0.54
CDK5RAP2-217ENST00000484546 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
CDK5RAP2-217ENST00000484546 KDM5CP41229 1560 aa18.44■□□□□ 0.54
CDK5RAP2-217ENST00000484546 LRRC9Q6ZRR7 1453 aa18.44■□□□□ 0.54
CDK5RAP2-217ENST00000484546 NCOA2Q15596 1464 aa18.43■□□□□ 0.54
CDK5RAP2-217ENST00000484546 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
CDK5RAP2-217ENST00000484546 ARHGEF12Q9NZN5 1544 aa18.43■□□□□ 0.54
CDK5RAP2-217ENST00000484546 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
CDK5RAP2-217ENST00000484546 KDM4FA0A1W2PPD8 638 aa18.42■□□□□ 0.54
CDK5RAP2-217ENST00000484546 YEATS2Q9ULM3 1422 aa18.4■□□□□ 0.54
CDK5RAP2-217ENST00000484546 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.54
CDK5RAP2-217ENST00000484546 HECW2Q9P2P5 1572 aa18.39■□□□□ 0.53
CDK5RAP2-217ENST00000484546 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
CDK5RAP2-217ENST00000484546 CFDP1Q9UEE9 299 aaPredicted RBP18.37■□□□□ 0.53
CDK5RAP2-217ENST00000484546 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
CDK5RAP2-217ENST00000484546 SIGLEC1Q9BZZ2 1709 aa18.36■□□□□ 0.53
CDK5RAP2-217ENST00000484546 ZNF777Q9ULD5 760 aaPredicted RBP18.36■□□□□ 0.53
CDK5RAP2-217ENST00000484546 AFAP1Q8N556 730 aa18.35■□□□□ 0.53
CDK5RAP2-217ENST00000484546 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
CDK5RAP2-217ENST00000484546 KANK4Q5T7N3 995 aaPredicted RBP18.34■□□□□ 0.53
CDK5RAP2-217ENST00000484546 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
CDK5RAP2-217ENST00000484546 DIP2CQ9Y2E4 1556 aa18.34■□□□□ 0.53
CDK5RAP2-217ENST00000484546 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.53
CDK5RAP2-217ENST00000484546 BCORL1Q5H9F3 1711 aa18.33■□□□□ 0.52
CDK5RAP2-217ENST00000484546 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
CDK5RAP2-217ENST00000484546 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
CDK5RAP2-217ENST00000484546 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
CDK5RAP2-217ENST00000484546 KIDINS220Q9ULH0 1771 aa18.31■□□□□ 0.52
CDK5RAP2-217ENST00000484546 ATP10AO60312 1499 aa18.31■□□□□ 0.52
CDK5RAP2-217ENST00000484546 CAMSAP2Q08AD1 1489 aa18.3■□□□□ 0.52
CDK5RAP2-217ENST00000484546 REREQ9P2R6 1566 aa18.29■□□□□ 0.52
CDK5RAP2-217ENST00000484546 INO80Q9ULG1 1556 aaPredicted RBP18.29■□□□□ 0.52
CDK5RAP2-217ENST00000484546 ZNF644Q9H582 1327 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP2-217ENST00000484546 MBD5Q9P267 1494 aa18.28■□□□□ 0.52
CDK5RAP2-217ENST00000484546 HNRNPMP52272 730 aaKnown RBP eCLIP18.28■□□□□ 0.52
CDK5RAP2-217ENST00000484546 MADDQ8WXG6 1647 aa18.27■□□□□ 0.52
CDK5RAP2-217ENST00000484546 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP2-217ENST00000484546 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
CDK5RAP2-217ENST00000484546 ATP7AQ04656 1500 aa18.26■□□□□ 0.51
CDK5RAP2-217ENST00000484546 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
CDK5RAP2-217ENST00000484546 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
CDK5RAP2-217ENST00000484546 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP2-217ENST00000484546 ARHGEF5Q12774 1597 aa18.22■□□□□ 0.51
CDK5RAP2-217ENST00000484546 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
CDK5RAP2-217ENST00000484546 FER1L4A9Z1Z3 1794 aa18.2■□□□□ 0.5
CDK5RAP2-217ENST00000484546 AGLP35573 1532 aa18.2■□□□□ 0.5
CDK5RAP2-217ENST00000484546 PTPRMP28827 1452 aa18.2■□□□□ 0.5
CDK5RAP2-217ENST00000484546 PLXNC1O60486 1568 aa18.19■□□□□ 0.5
CDK5RAP2-217ENST00000484546 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
CDK5RAP2-217ENST00000484546 PTPN23Q9H3S7 1636 aa18.17■□□□□ 0.5
CDK5RAP2-217ENST00000484546 RTEL1-TNFRSF6BF6WH68 1400 aa18.16■□□□□ 0.5
CDK5RAP2-217ENST00000484546 MLECQ14165 292 aa18.16■□□□□ 0.5
CDK5RAP2-217ENST00000484546 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
CDK5RAP2-217ENST00000484546 A2MP01023 1474 aa18.15■□□□□ 0.5
CDK5RAP2-217ENST00000484546 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP2-217ENST00000484546 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
CDK5RAP2-217ENST00000484546 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
CDK5RAP2-217ENST00000484546 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
CDK5RAP2-217ENST00000484546 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP2-217ENST00000484546 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
CDK5RAP2-217ENST00000484546 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
CDK5RAP2-217ENST00000484546 SHANK2Q9UPX8 1470 aa18.08■□□□□ 0.49
CDK5RAP2-217ENST00000484546 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
CDK5RAP2-217ENST00000484546 ABCC5O15440 1437 aa18.06■□□□□ 0.48
CDK5RAP2-217ENST00000484546 DAPK1P53355 1430 aa18.06■□□□□ 0.48
CDK5RAP2-217ENST00000484546 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP2-217ENST00000484546 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
CDK5RAP2-217ENST00000484546 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.48
CDK5RAP2-217ENST00000484546 MROH2AA6NES4 1674 aa18.02■□□□□ 0.47
CDK5RAP2-217ENST00000484546 C3P01024 1663 aa18.02■□□□□ 0.47
CDK5RAP2-217ENST00000484546 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
CDK5RAP2-217ENST00000484546 CLTCQ00610 1675 aaKnown RBP18■□□□□ 0.47
CDK5RAP2-217ENST00000484546 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
CDK5RAP2-217ENST00000484546 EIF2AK4Q9P2K8 1649 aaKnown RBP18■□□□□ 0.47
CDK5RAP2-217ENST00000484546 DUOX2Q9NRD8 1548 aa17.98■□□□□ 0.47
CDK5RAP2-217ENST00000484546 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP2-217ENST00000484546 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
CDK5RAP2-217ENST00000484546 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
CDK5RAP2-217ENST00000484546 KIF15Q9NS87 1388 aa17.96■□□□□ 0.47
CDK5RAP2-217ENST00000484546 CEBPAP49715 358 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP2-217ENST00000484546 GGT6Q6P531 493 aa17.96■□□□□ 0.47
CDK5RAP2-217ENST00000484546 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
CDK5RAP2-217ENST00000484546 KIF3BO15066 747 aa17.95■□□□□ 0.46
CDK5RAP2-217ENST00000484546 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms