RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 CFAP44Q96MT7 982 aa15.98■□□□□ 0.15
MDH1-211ENST00000484538 RYDENQ9NUL5 291 aaKnown RBP15.94■□□□□ 0.14
MDH1-211ENST00000484538 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
MDH1-211ENST00000484538 KIF3CO14782 793 aa15.88■□□□□ 0.13
MDH1-211ENST00000484538 FAM163AQ96GL9 167 aaPredicted RBP15.87■□□□□ 0.13
MDH1-211ENST00000484538 HOXB3P14651 431 aaPredicted RBP15.84■□□□□ 0.13
MDH1-211ENST00000484538 SNPHO15079 494 aa15.83■□□□□ 0.12
MDH1-211ENST00000484538 C2orf72A6NCS6 295 aa15.82■□□□□ 0.12
MDH1-211ENST00000484538 ST18O60284 1047 aa15.82■□□□□ 0.12
MDH1-211ENST00000484538 VSIG10Q8N0Z9 540 aa15.72■□□□□ 0.11
MDH1-211ENST00000484538 TMC2Q8TDI7 906 aa15.72■□□□□ 0.11
MDH1-211ENST00000484538 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
MDH1-211ENST00000484538 GPHNQ9NQX3 736 aaPredicted RBP15.71■□□□□ 0.11
MDH1-211ENST00000484538 CRISPLD2Q9H0B8 497 aa15.7■□□□□ 0.1
MDH1-211ENST00000484538 POTEMA6NI47 508 aa15.69■□□□□ 0.1
MDH1-211ENST00000484538 DOK7Q18PE1 504 aa15.69■□□□□ 0.1
MDH1-211ENST00000484538 NCKAP5LQ9HCH0 1330 aa15.68■□□□□ 0.1
MDH1-211ENST00000484538 POTEGQ6S5H5 508 aa15.68■□□□□ 0.1
MDH1-211ENST00000484538 CADPS2Q86UW7 1296 aa15.68■□□□□ 0.1
MDH1-211ENST00000484538 FOXK1P85037 733 aa15.66■□□□□ 0.1
MDH1-211ENST00000484538 DSG2Q14126 1118 aa15.63■□□□□ 0.09
MDH1-211ENST00000484538 HOXB1P14653 301 aaPredicted RBP15.61■□□□□ 0.09
MDH1-211ENST00000484538 GPR153Q6NV75 609 aa15.6■□□□□ 0.09
MDH1-211ENST00000484538 MARVELD3Q96A59 401 aa15.6■□□□□ 0.09
MDH1-211ENST00000484538 ZSWIM6Q9HCJ5 1215 aa15.6■□□□□ 0.09
MDH1-211ENST00000484538 SLC34A2O95436 690 aa15.59■□□□□ 0.09
MDH1-211ENST00000484538 PLPP6Q8IY26 295 aa15.59■□□□□ 0.09
MDH1-211ENST00000484538 ZNF710Q8N1W2 664 aa15.59■□□□□ 0.09
MDH1-211ENST00000484538 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.08
MDH1-211ENST00000484538 PDE4AP27815 886 aa15.57■□□□□ 0.08
MDH1-211ENST00000484538 RIMBP2O15034 1052 aa15.56■□□□□ 0.08
MDH1-211ENST00000484538 MFSD10Q14728 455 aa15.55■□□□□ 0.08
MDH1-211ENST00000484538 PPP1R15BQ5SWA1 713 aa15.52■□□□□ 0.08
MDH1-211ENST00000484538 ARSIQ5FYB1 569 aa15.51■□□□□ 0.07
MDH1-211ENST00000484538 LARP6Q9BRS8 491 aaKnown RBP15.51■□□□□ 0.07
MDH1-211ENST00000484538 POTEB3A0JP26 581 aa15.5■□□□□ 0.07
MDH1-211ENST00000484538 EMP3P54852 163 aa15.5■□□□□ 0.07
MDH1-211ENST00000484538 POTEBQ6S5H4 581 aa15.5■□□□□ 0.07
MDH1-211ENST00000484538 KHSRPQ92945 711 aaKnown RBP eCLIP15.5■□□□□ 0.07
MDH1-211ENST00000484538 PTCD2Q8WV60 388 aaKnown RBP15.49■□□□□ 0.07
MDH1-211ENST00000484538 PCDHGA4Q9Y5G9 962 aa15.49■□□□□ 0.07
MDH1-211ENST00000484538 DDX27Q96GQ7 796 aaKnown RBP15.48■□□□□ 0.07
MDH1-211ENST00000484538 KDM4FA0A1W2PPD8 638 aa15.44■□□□□ 0.06
MDH1-211ENST00000484538 FAM205CA6NFA0 338 aa15.43■□□□□ 0.06
MDH1-211ENST00000484538 OXER1Q8TDS5 423 aa15.43■□□□□ 0.06
MDH1-211ENST00000484538 HS3ST6Q96QI5 342 aa15.42■□□□□ 0.06
MDH1-211ENST00000484538 NUDT7P0C024 238 aa15.39■□□□□ 0.05
MDH1-211ENST00000484538 CDAN1Q8IWY9 1227 aa15.39■□□□□ 0.05
MDH1-211ENST00000484538 PCDH10Q9P2E7 1040 aa15.39■□□□□ 0.05
MDH1-211ENST00000484538 EMILIN3Q9NT22 766 aa15.36■□□□□ 0.05
MDH1-211ENST00000484538 ERBB3P21860 1342 aa15.36■□□□□ 0.05
MDH1-211ENST00000484538 CAMK2BQ13554 666 aa15.35■□□□□ 0.05
MDH1-211ENST00000484538 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
MDH1-211ENST00000484538 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.04
MDH1-211ENST00000484538 VARS2Q5ST30 1063 aaKnown RBP15.32■□□□□ 0.04
MDH1-211ENST00000484538 LHX6Q9UPM6 363 aa15.31■□□□□ 0.04
MDH1-211ENST00000484538 TBC1D12O60347 775 aa15.29■□□□□ 0.04
MDH1-211ENST00000484538 WDR70Q9NW82 654 aa15.27■□□□□ 0.04
MDH1-211ENST00000484538 KRTAP3-3Q9BYR6 98 aa15.26■□□□□ 0.03
MDH1-211ENST00000484538 KRTAP3-2Q9BYR7 98 aa15.26■□□□□ 0.03
MDH1-211ENST00000484538 ZNF687Q8N1G0 1237 aa15.24■□□□□ 0.03
MDH1-211ENST00000484538 BCANQ96GW7 911 aa15.24■□□□□ 0.03
MDH1-211ENST00000484538 ANO8Q9HCE9 1232 aaPredicted RBP15.22■□□□□ 0.03
MDH1-211ENST00000484538 EVI5O60447 810 aa15.19■□□□□ 0.02
MDH1-211ENST00000484538 MAP3K9P80192 1104 aa15.18■□□□□ 0.02
MDH1-211ENST00000484538 E2F4Q16254 413 aa15.17■□□□□ 0.02
MDH1-211ENST00000484538 POTEEQ6S8J3 1075 aa15.17■□□□□ 0.02
MDH1-211ENST00000484538 DPYSL4O14531 572 aa15.16■□□□□ 0.02
MDH1-211ENST00000484538 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
MDH1-211ENST00000484538 PSDA5PKW4 1024 aaPredicted RBP15.14■□□□□ 0.01
MDH1-211ENST00000484538 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
MDH1-211ENST00000484538 FOSBP53539 338 aa15.1■□□□□ 0.01
MDH1-211ENST00000484538 NBR1Q14596 966 aa15.08■□□□□ 0
MDH1-211ENST00000484538 PDIA6Q15084 440 aa15.06■□□□□ 0
MDH1-211ENST00000484538 PPP4R3BQ5MIZ7 849 aa15.06■□□□□ 0
MDH1-211ENST00000484538 KCNV2Q8TDN2 545 aa15.06■□□□□ 0
MDH1-211ENST00000484538 PBX2P40425 430 aa15.05■□□□□ -0
MDH1-211ENST00000484538 ZNF454Q8N9F8 522 aa15.05■□□□□ -0
MDH1-211ENST00000484538 JPH4Q96JJ6 628 aa15.05■□□□□ -0
MDH1-211ENST00000484538 AXIN2Q9Y2T1 843 aa15.04■□□□□ -0
MDH1-211ENST00000484538 SPNS2Q8IVW8 549 aa15.03■□□□□ -0
MDH1-211ENST00000484538 PCDHGA10Q9Y5H3 936 aa15.02■□□□□ -0
MDH1-211ENST00000484538 PTGER2P43116 358 aa15.01□□□□□ -0.01
MDH1-211ENST00000484538 SPDYE16A6NNV3 312 aaPredicted RBP14.99□□□□□ -0.01
MDH1-211ENST00000484538 ARHGAP33O14559 1287 aa14.99□□□□□ -0.01
MDH1-211ENST00000484538 LSM11P83369 360 aaKnown RBP eCLIP14.98□□□□□ -0.01
MDH1-211ENST00000484538 ARHGEF1Q92888 912 aaKnown RBP14.98□□□□□ -0.01
MDH1-211ENST00000484538 BCL2L12Q9HB09 334 aa14.98□□□□□ -0.01
MDH1-211ENST00000484538 PLSCR2Q9NRY7 297 aa14.98□□□□□ -0.01
MDH1-211ENST00000484538 PSEN2P49810 448 aa14.97□□□□□ -0.01
MDH1-211ENST00000484538 ZDHHC16Q969W1 377 aa14.97□□□□□ -0.01
MDH1-211ENST00000484538 ADAM33Q9BZ11 813 aa14.97□□□□□ -0.01
MDH1-211ENST00000484538 PHF14O94880 888 aa14.96□□□□□ -0.01
MDH1-211ENST00000484538 DMRTA1Q5VZB9 504 aa14.94□□□□□ -0.02
MDH1-211ENST00000484538 DDX12PQ92771 950 aa14.92□□□□□ -0.02
MDH1-211ENST00000484538 TYW1BQ6NUM6 668 aa14.91□□□□□ -0.02
MDH1-211ENST00000484538 ANKRD13DQ6ZTN6 518 aa14.91□□□□□ -0.02
MDH1-211ENST00000484538 KCNK17Q96T54 332 aa14.9□□□□□ -0.02
MDH1-211ENST00000484538 MMRN1Q13201 1228 aa14.89□□□□□ -0.03
MDH1-211ENST00000484538 FBXW7Q969H0 707 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms