RNA–Protein interactions for RNA: ENST00000484468.1

LPP-216, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-216ENST00000484468 PLCH2O75038 1416 aa12.36□□□□□ -0.43
LPP-216ENST00000484468 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
LPP-216ENST00000484468 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
LPP-216ENST00000484468 ZMYM4Q5VZL5 1548 aa12.33□□□□□ -0.44
LPP-216ENST00000484468 CDK11AQ9UQ88 783 aaPredicted RBP12.33□□□□□ -0.44
LPP-216ENST00000484468 FYCO1Q9BQS8 1478 aa12.33□□□□□ -0.44
LPP-216ENST00000484468 POGZQ7Z3K3 1410 aa12.32□□□□□ -0.44
LPP-216ENST00000484468 SCAPERQ9BY12 1400 aa12.32□□□□□ -0.44
LPP-216ENST00000484468 YEATS2Q9ULM3 1422 aa12.32□□□□□ -0.44
LPP-216ENST00000484468 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
LPP-216ENST00000484468 ZFYVE16Q7Z3T8 1539 aa12.32□□□□□ -0.44
LPP-216ENST00000484468 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
LPP-216ENST00000484468 HECW2Q9P2P5 1572 aa12.3□□□□□ -0.44
LPP-216ENST00000484468 BCORL1Q5H9F3 1711 aa12.3□□□□□ -0.44
LPP-216ENST00000484468 SIGLEC1Q9BZZ2 1709 aa12.3□□□□□ -0.44
LPP-216ENST00000484468 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
LPP-216ENST00000484468 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
LPP-216ENST00000484468 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
LPP-216ENST00000484468 PREX2Q70Z35 1606 aa12.28□□□□□ -0.44
LPP-216ENST00000484468 CEP162Q5TB80 1403 aa12.28□□□□□ -0.44
LPP-216ENST00000484468 CDC42BPBQ9Y5S2 1711 aa12.27□□□□□ -0.45
LPP-216ENST00000484468 PTPRMP28827 1452 aa12.27□□□□□ -0.45
LPP-216ENST00000484468 ZNF518AQ6AHZ1 1483 aa12.25□□□□□ -0.45
LPP-216ENST00000484468 MAGI2Q86UL8 1455 aa12.25□□□□□ -0.45
LPP-216ENST00000484468 ABCC1P33527 1531 aa12.25□□□□□ -0.45
LPP-216ENST00000484468 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
LPP-216ENST00000484468 KDM5CP41229 1560 aa12.24□□□□□ -0.45
LPP-216ENST00000484468 CDC42BPAQ5VT25 1732 aa12.24□□□□□ -0.45
LPP-216ENST00000484468 ARHGEF12Q9NZN5 1544 aa12.23□□□□□ -0.45
LPP-216ENST00000484468 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
LPP-216ENST00000484468 C9orf84Q5VXU9 1444 aa12.22□□□□□ -0.45
LPP-216ENST00000484468 TRAPPC8Q9Y2L5 1435 aa12.22□□□□□ -0.45
LPP-216ENST00000484468 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
LPP-216ENST00000484468 MLECQ14165 292 aa12.21□□□□□ -0.45
LPP-216ENST00000484468 DIP2CQ9Y2E4 1556 aa12.21□□□□□ -0.46
LPP-216ENST00000484468 ATP10AO60312 1499 aa12.21□□□□□ -0.46
LPP-216ENST00000484468 ABCA6Q8N139 1617 aa12.2□□□□□ -0.46
LPP-216ENST00000484468 SAMD9LQ8IVG5 1584 aa12.2□□□□□ -0.46
LPP-216ENST00000484468 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
LPP-216ENST00000484468 LOC105371045A0A1W2PR82 267 aa12.19□□□□□ -0.46
LPP-216ENST00000484468 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
LPP-216ENST00000484468 GPATCH8Q9UKJ3 1502 aaKnown RBP12.19□□□□□ -0.46
LPP-216ENST00000484468 FER1L4A9Z1Z3 1794 aa12.18□□□□□ -0.46
LPP-216ENST00000484468 EHBP1L1Q8N3D4 1523 aa12.18□□□□□ -0.46
LPP-216ENST00000484468 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
LPP-216ENST00000484468 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
LPP-216ENST00000484468 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
LPP-216ENST00000484468 MLH3Q9UHC1 1453 aa12.16□□□□□ -0.46
LPP-216ENST00000484468 CCNB3Q8WWL7 1395 aa12.16□□□□□ -0.46
LPP-216ENST00000484468 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
LPP-216ENST00000484468 LMTK3Q96Q04 1460 aa12.15□□□□□ -0.46
LPP-216ENST00000484468 REREQ9P2R6 1566 aa12.14□□□□□ -0.47
LPP-216ENST00000484468 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
LPP-216ENST00000484468 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
LPP-216ENST00000484468 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
LPP-216ENST00000484468 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
LPP-216ENST00000484468 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
LPP-216ENST00000484468 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
LPP-216ENST00000484468 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
LPP-216ENST00000484468 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
LPP-216ENST00000484468 PLEKHH2Q8IVE3 1493 aa12.1□□□□□ -0.47
LPP-216ENST00000484468 AGLP35573 1532 aa12.1□□□□□ -0.47
LPP-216ENST00000484468 SPAG9O60271 1321 aaKnown RBP12.1□□□□□ -0.47
LPP-216ENST00000484468 CEBPAP49715 358 aaPredicted RBP12.09□□□□□ -0.47
LPP-216ENST00000484468 HSPA2P54652 639 aa12.09□□□□□ -0.47
LPP-216ENST00000484468 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.47
LPP-216ENST00000484468 MBD5Q9P267 1494 aa12.07□□□□□ -0.48
LPP-216ENST00000484468 PLXNC1O60486 1568 aa12.06□□□□□ -0.48
LPP-216ENST00000484468 CAMSAP2Q08AD1 1489 aa12.06□□□□□ -0.48
LPP-216ENST00000484468 LRRC9Q6ZRR7 1453 aa12.06□□□□□ -0.48
LPP-216ENST00000484468 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
LPP-216ENST00000484468 C3P01024 1663 aa12.04□□□□□ -0.48
LPP-216ENST00000484468 PREX1Q8TCU6 1659 aa12.04□□□□□ -0.48
LPP-216ENST00000484468 A2MP01023 1474 aa12.04□□□□□ -0.48
LPP-216ENST00000484468 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
LPP-216ENST00000484468 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.48
LPP-216ENST00000484468 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
LPP-216ENST00000484468 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
LPP-216ENST00000484468 UHRF1BP1Q6BDS2 1440 aa12.01□□□□□ -0.49
LPP-216ENST00000484468 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
LPP-216ENST00000484468 MAP3K1Q13233 1512 aa12□□□□□ -0.49
LPP-216ENST00000484468 RTEL1-TNFRSF6BF6WH68 1400 aa11.99□□□□□ -0.49
LPP-216ENST00000484468 MROH2AA6NES4 1674 aa11.99□□□□□ -0.49
LPP-216ENST00000484468 CLTCQ00610 1675 aaKnown RBP11.99□□□□□ -0.49
LPP-216ENST00000484468 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
LPP-216ENST00000484468 GGT6Q6P531 493 aa11.97□□□□□ -0.49
LPP-216ENST00000484468 MYOM3Q5VTT5 1437 aa11.96□□□□□ -0.49
LPP-216ENST00000484468 ZMYM3Q14202 1370 aa11.95□□□□□ -0.5
LPP-216ENST00000484468 DHX29Q7Z478 1369 aaKnown RBP11.95□□□□□ -0.5
LPP-216ENST00000484468 STRCQ7RTU9 1775 aa11.95□□□□□ -0.5
LPP-216ENST00000484468 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
LPP-216ENST00000484468 NPATQ14207 1427 aa11.94□□□□□ -0.5
LPP-216ENST00000484468 PTPRKQ15262 1439 aa11.93□□□□□ -0.5
LPP-216ENST00000484468 MIA2Q96PC5 1412 aa11.93□□□□□ -0.5
LPP-216ENST00000484468 MYO3AQ8NEV4 1616 aa11.93□□□□□ -0.5
LPP-216ENST00000484468 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
LPP-216ENST00000484468 KIF3BO15066 747 aa11.92□□□□□ -0.5
LPP-216ENST00000484468 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
LPP-216ENST00000484468 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
LPP-216ENST00000484468 PTPN23Q9H3S7 1636 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms