RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
SSBP1-211ENST00000484178 RIMBP2O15034 1052 aa11.5□□□□□ -0.57
SSBP1-211ENST00000484178 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
SSBP1-211ENST00000484178 STK25O00506 426 aa11.49□□□□□ -0.57
SSBP1-211ENST00000484178 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
SSBP1-211ENST00000484178 RGL2O15211 777 aa11.46□□□□□ -0.57
SSBP1-211ENST00000484178 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
SSBP1-211ENST00000484178 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
SSBP1-211ENST00000484178 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
SSBP1-211ENST00000484178 GPR153Q6NV75 609 aa11.42□□□□□ -0.58
SSBP1-211ENST00000484178 ERBB3P21860 1342 aa11.39□□□□□ -0.59
SSBP1-211ENST00000484178 KIF3CO14782 793 aa11.39□□□□□ -0.59
SSBP1-211ENST00000484178 VARS2Q5ST30 1063 aaKnown RBP11.32□□□□□ -0.6
SSBP1-211ENST00000484178 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
SSBP1-211ENST00000484178 C2orf72A6NCS6 295 aa11.31□□□□□ -0.6
SSBP1-211ENST00000484178 SLC34A2O95436 690 aa11.29□□□□□ -0.6
SSBP1-211ENST00000484178 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
SSBP1-211ENST00000484178 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
SSBP1-211ENST00000484178 PPP1R37O75864 691 aa11.25□□□□□ -0.61
SSBP1-211ENST00000484178 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
SSBP1-211ENST00000484178 ZNF316A6NFI3 1004 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-211ENST00000484178 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
SSBP1-211ENST00000484178 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■■■□□ 16.4
SSBP1-211ENST00000484178 PCDHGA4Q9Y5G9 962 aa11.18□□□□□ -0.62
SSBP1-211ENST00000484178 PTGER2P43116 358 aa11.16□□□□□ -0.62
SSBP1-211ENST00000484178 FOXK1P85037 733 aa11.16□□□□□ -0.62
SSBP1-211ENST00000484178 NUDT7P0C024 238 aa11.14□□□□□ -0.63
SSBP1-211ENST00000484178 CHGAP10645 457 aaKnown RBP11.14□□□□□ -0.63
SSBP1-211ENST00000484178 GPHNQ9NQX3 736 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-211ENST00000484178 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
SSBP1-211ENST00000484178 PBX2P40425 430 aa11.13□□□□□ -0.63
SSBP1-211ENST00000484178 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
SSBP1-211ENST00000484178 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
SSBP1-211ENST00000484178 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
SSBP1-211ENST00000484178 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
SSBP1-211ENST00000484178 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
SSBP1-211ENST00000484178 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-211ENST00000484178 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
SSBP1-211ENST00000484178 LSM11P83369 360 aaKnown RBP eCLIP11.09□□□□□ -0.63
SSBP1-211ENST00000484178 PLPP6Q8IY26 295 aa11.07□□□□□ -0.64
SSBP1-211ENST00000484178 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
SSBP1-211ENST00000484178 DSG2Q14126 1118 aa11.05□□□□□ -0.64
SSBP1-211ENST00000484178 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
SSBP1-211ENST00000484178 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
SSBP1-211ENST00000484178 TBC1D12O60347 775 aa11.01□□□□□ -0.65
SSBP1-211ENST00000484178 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
SSBP1-211ENST00000484178 OXER1Q8TDS5 423 aa10.97□□□□□ -0.65
SSBP1-211ENST00000484178 AXIN2Q9Y2T1 843 aa10.97□□□□□ -0.65
SSBP1-211ENST00000484178 TK2O00142 265 aa10.95□□□□□ -0.66
SSBP1-211ENST00000484178 GTPBP6O43824 516 aaPredicted RBP10.95□□□□□ -0.66
SSBP1-211ENST00000484178 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
SSBP1-211ENST00000484178 PDE4AP27815 886 aa10.93□□□□□ -0.66
SSBP1-211ENST00000484178 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
SSBP1-211ENST00000484178 PPP1R15BQ5SWA1 713 aa10.92□□□□□ -0.66
SSBP1-211ENST00000484178 ADGRD1Q6QNK2 874 aa10.92□□□□□ -0.66
SSBP1-211ENST00000484178 HRO43593 1189 aa10.88□□□□□ -0.67
SSBP1-211ENST00000484178 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
SSBP1-211ENST00000484178 PSEN2P49810 448 aa10.86□□□□□ -0.67
SSBP1-211ENST00000484178 MFSD10Q14728 455 aa10.86□□□□□ -0.67
SSBP1-211ENST00000484178 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
SSBP1-211ENST00000484178 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
SSBP1-211ENST00000484178 KCNH8Q96L42 1107 aa10.83□□□□□ -0.68
SSBP1-211ENST00000484178 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
SSBP1-211ENST00000484178 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
SSBP1-211ENST00000484178 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
SSBP1-211ENST00000484178 SLC4A5Q9BY07 1137 aa10.82□□□□□ -0.68
SSBP1-211ENST00000484178 FOSBP53539 338 aa10.81□□□□□ -0.68
SSBP1-211ENST00000484178 LARP6Q9BRS8 491 aaKnown RBP10.81□□□□□ -0.68
SSBP1-211ENST00000484178 ZNF454Q8N9F8 522 aa10.79□□□□□ -0.68
SSBP1-211ENST00000484178 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
SSBP1-211ENST00000484178 KCNK17Q96T54 332 aa10.78□□□□□ -0.68
SSBP1-211ENST00000484178 EVI5O60447 810 aa10.77□□□□□ -0.69
SSBP1-211ENST00000484178 VPS9D1Q9Y2B5 631 aa10.77□□□□□ -0.69
SSBP1-211ENST00000484178 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
SSBP1-211ENST00000484178 PTPREP23469 700 aa10.74□□□□□ -0.69
SSBP1-211ENST00000484178 MAP3K9P80192 1104 aa10.73□□□□□ -0.69
SSBP1-211ENST00000484178 EMILIN3Q9NT22 766 aa10.73□□□□□ -0.69
SSBP1-211ENST00000484178 BHMG1C9JSJ3 638 aaPredicted RBP10.72□□□□□ -0.69
SSBP1-211ENST00000484178 ZDHHC16Q969W1 377 aa10.72□□□□□ -0.69
SSBP1-211ENST00000484178 CADPS2Q86UW7 1296 aa10.71□□□□□ -0.69
SSBP1-211ENST00000484178 STAC3Q96MF2 364 aa10.71□□□□□ -0.69
SSBP1-211ENST00000484178 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
SSBP1-211ENST00000484178 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
SSBP1-211ENST00000484178 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
SSBP1-211ENST00000484178 KCTD12Q96CX2 325 aaKnown RBP10.68□□□□□ -0.7
SSBP1-211ENST00000484178 ADAM33Q9BZ11 813 aa10.68□□□□□ -0.7
SSBP1-211ENST00000484178 BBXQ8WY36 941 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-211ENST00000484178 PCDHGA10Q9Y5H3 936 aa10.66□□□□□ -0.7
SSBP1-211ENST00000484178 PHF14O94880 888 aa10.64□□□□□ -0.71
SSBP1-211ENST00000484178 FBXW7Q969H0 707 aa10.64□□□□□ -0.71
SSBP1-211ENST00000484178 PPP1R3GB7ZBB8 358 aa10.63□□□□□ -0.71
SSBP1-211ENST00000484178 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
SSBP1-211ENST00000484178 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
SSBP1-211ENST00000484178 THSD4Q6ZMP0 1018 aa10.6□□□□□ -0.71
SSBP1-211ENST00000484178 MRPL50Q8N5N7 158 aaKnown RBP10.6□□□□□ -0.71
SSBP1-211ENST00000484178 IFFO2Q5TF58 517 aa10.59□□□□□ -0.71
SSBP1-211ENST00000484178 RABGEF1Q9UJ41 708 aa10.59□□□□□ -0.71
SSBP1-211ENST00000484178 EPAS1Q99814 870 aa10.58□□□□□ -0.72
SSBP1-211ENST00000484178 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-211ENST00000484178 WNT2BQ93097 391 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms