RNA–Protein interactions for RNA: ENST00000484074.5

FNDC3A-203, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best)

Gene FNDC3A, Length 6,082 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-203ENST00000484074 SCRIBQ14160 1630 aa5.14□□□□□ -1.59
FNDC3A-203ENST00000484074 SAFB2Q14151 953 aaKnown RBP eCLIP5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 HDGFL2Q7Z4V5 671 aaPredicted RBP5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 CEP89Q96ST8 783 aa5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 MRS2Q9HD23 443 aa5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 A0A0U1RQG5 324 aaPredicted RBP5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 PLCB2Q00722 1185 aa5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 NOL10Q9BSC4 688 aaKnown RBP5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 ACIN1Q9UKV3 1341 aaKnown RBP5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 CCAR1Q8IX12 1150 aaKnown RBP5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 STK26Q9P289 416 aa5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 RAD21O60216 631 aa5.13□□□□□ -1.59
FNDC3A-203ENST00000484074 RSF1Q96T23 1441 aaPredicted RBP5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 RASSF8Q8NHQ8 419 aa5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 DNTTIP2Q5QJE6 756 aaKnown RBP5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 MCCP23508 829 aa5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 GLIPR1L2Q4G1C9 344 aa5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 AMOTL1Q8IY63 956 aa5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 CHMP4AQ9BY43 222 aa5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 WASHC2AQ641Q2 1341 aa5.12□□□□□ -1.59
FNDC3A-203ENST00000484074 MS4A1P11836 297 aa5.11□□□□□ -1.59
FNDC3A-203ENST00000484074 ANO8Q9HCE9 1232 aaPredicted RBP5.11□□□□□ -1.59
FNDC3A-203ENST00000484074 WWC1Q8IX03 1113 aa5.11□□□□□ -1.59
FNDC3A-203ENST00000484074 NGDNQ8NEJ9 315 aaKnown RBP5.11□□□□□ -1.59
FNDC3A-203ENST00000484074 DDRGK1Q96HY6 314 aa5.1□□□□□ -1.59
FNDC3A-203ENST00000484074 FBXO3Q9UK99 471 aa5.1□□□□□ -1.59
FNDC3A-203ENST00000484074 CARD11Q9BXL7 1154 aa5.1□□□□□ -1.59
FNDC3A-203ENST00000484074 DDX10Q13206 875 aaKnown RBP5.1□□□□□ -1.59
FNDC3A-203ENST00000484074 SYTL4Q96C24 671 aaPredicted RBP5.1□□□□□ -1.59
FNDC3A-203ENST00000484074 TOMM22Q9NS69 142 aa5.1□□□□□ -1.59
FNDC3A-203ENST00000484074 PKNOX2Q96KN3 472 aa5.09□□□□□ -1.59
FNDC3A-203ENST00000484074 KIAA1211Q6ZU35 1233 aa5.09□□□□□ -1.59
FNDC3A-203ENST00000484074 FRAT1Q92837 279 aaPredicted RBP5.09□□□□□ -1.59
FNDC3A-203ENST00000484074 CCDC34Q96HJ3 373 aa5.09□□□□□ -1.6
FNDC3A-203ENST00000484074 GPATCH3Q96I76 525 aa5.09□□□□□ -1.6
FNDC3A-203ENST00000484074 SPAG9O60271 1321 aaKnown RBP5.08□□□□□ -1.6
FNDC3A-203ENST00000484074 CFAP44Q96MT7 982 aa5.08□□□□□ -1.6
FNDC3A-203ENST00000484074 HDAC5Q9UQL6 1122 aa5.08□□□□□ -1.6
FNDC3A-203ENST00000484074 WWC2Q6AWC2 1192 aa5.08□□□□□ -1.6
FNDC3A-203ENST00000484074 MORC1Q86VD1 984 aa5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 HSP90AB1P08238 724 aaKnown RBP5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 HSP90B1P14625 803 aaKnown RBP5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 AMPHP49418 695 aa5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 DRC7Q8IY82 874 aa5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 RBM33Q96EV2 1170 aaKnown RBP5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 CCDC43Q96MW1 224 aaKnown RBP5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 CLIP1P30622 1438 aa5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 SAMD1Q6SPF0 538 aaPredicted RBP5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 PAXIP1Q6ZW49 1069 aaPredicted RBP5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 LTV1Q96GA3 475 aaPredicted RBP5.07□□□□□ -1.6
FNDC3A-203ENST00000484074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.06□□□□□ -1.66e-7■■■■■ 167.7
FNDC3A-203ENST00000484074 CALD1Q05682 793 aaKnown RBP5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 VPS37DQ86XT2 251 aa5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 STK31Q9BXU1 1019 aa5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 PPP4R2Q9NY27 417 aa5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 PAF1Q8N7H5 531 aa5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 R3HCC1Q9Y3T6 440 aaKnown RBP5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 C1orf141Q5JVX7 400 aa5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 CREBRFQ8IUR6 639 aa5.06□□□□□ -1.6
FNDC3A-203ENST00000484074 HTATSF1O43719 755 aaKnown RBP5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 ATF3P18847 181 aa5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 TMF1P82094 1093 aa5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 CC2D1BQ5T0F9 858 aaKnown RBP5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 DHX37Q8IY37 1157 aaKnown RBP5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 TPM4P67936 248 aa5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 CCNB3Q8WWL7 1395 aa5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 ERICH6BQ5W0A0 696 aa5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 EIF4G1Q04637 1599 aaKnown RBP5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 APBB1O00213 710 aa5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 TTC5Q8N0Z6 440 aa5.05□□□□□ -1.6
FNDC3A-203ENST00000484074 WDHD1O75717 1129 aaPredicted RBP5.04□□□□□ -1.6
FNDC3A-203ENST00000484074 CYB5RLQ6IPT4 315 aa5.04□□□□□ -1.6
FNDC3A-203ENST00000484074 PPM1FP49593 454 aaPredicted RBP5.04□□□□□ -1.6
FNDC3A-203ENST00000484074 TMEM132AQ24JP5 1023 aa5.04□□□□□ -1.6
FNDC3A-203ENST00000484074 AKAP17AQ02040 695 aaKnown RBP5.03□□□□□ -1.6
FNDC3A-203ENST00000484074 NUTM2FA1L443 756 aa5.03□□□□□ -1.6
FNDC3A-203ENST00000484074 SPDYE4A6NLX3 237 aa5.03□□□□□ -1.6
FNDC3A-203ENST00000484074 PIP4K2BP78356 416 aa5.03□□□□□ -1.6
FNDC3A-203ENST00000484074 WASHC2CQ9Y4E1 1318 aa5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 NUTM2BA6NNL0 878 aaPredicted RBP5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 NUTM2EB1AL46 878 aaPredicted RBP5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 TPM2P07951 284 aa5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 NUTM2AQ8IVF1 878 aaPredicted RBP5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 VSIG10Q8N0Z9 540 aa5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 CARMIL2Q6F5E8 1435 aa5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 MAP3K9P80192 1104 aa5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 IPO8O15397 1037 aaKnown RBP5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 PSME1Q06323 249 aa5.02□□□□□ -1.61
FNDC3A-203ENST00000484074 HMGB1P09429 215 aaKnown RBP5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 SYNE3Q6ZMZ3 975 aa5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 TMEM87AQ8NBN3 555 aa5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 EFCAB2Q5VUJ9 269 aa5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 SMC4Q9NTJ3 1288 aa5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 TERF2IPQ9NYB0 399 aa5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 DCAF11Q8TEB1 546 aa5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 ZNF526Q8TF50 670 aaPredicted RBP5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 PES1O00541 588 aaKnown RBP5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 UBE2Q2Q8WVN8 375 aa5.01□□□□□ -1.61
FNDC3A-203ENST00000484074 NUTM2DQ5VT03 806 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms