RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CHMP4BQ9H444 224 aaKnown RBP12.84□□□□□ -0.35
COL12A1-207ENST00000483888 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.35
COL12A1-207ENST00000483888 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
COL12A1-207ENST00000483888 RDXP35241 583 aaKnown RBP12.83□□□□□ -0.36
COL12A1-207ENST00000483888 FOXD4L1Q9NU39 408 aa12.83□□□□□ -0.36
COL12A1-207ENST00000483888 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
COL12A1-207ENST00000483888 GNL2Q13823 731 aaKnown RBP12.82□□□□□ -0.36
COL12A1-207ENST00000483888 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
COL12A1-207ENST00000483888 PDE4AP27815 886 aa12.81□□□□□ -0.36
COL12A1-207ENST00000483888 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
COL12A1-207ENST00000483888 ARID3CA6NKF2 412 aa12.8□□□□□ -0.36
COL12A1-207ENST00000483888 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
COL12A1-207ENST00000483888 NFKBIBQ15653 356 aa12.79□□□□□ -0.36
COL12A1-207ENST00000483888 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
COL12A1-207ENST00000483888 EEA1Q15075 1411 aa12.79□□□□□ -0.36
COL12A1-207ENST00000483888 KNSTRNQ9Y448 316 aa12.78□□□□□ -0.36
COL12A1-207ENST00000483888 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
COL12A1-207ENST00000483888 HSP90AB3PQ58FF7 597 aa12.76□□□□□ -0.37
COL12A1-207ENST00000483888 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
COL12A1-207ENST00000483888 DIAPH3Q9NSV4 1193 aa12.76□□□□□ -0.37
COL12A1-207ENST00000483888 CFAP53Q96M91 514 aa12.75□□□□□ -0.37
COL12A1-207ENST00000483888 H0YHG0 523 aa12.75□□□□□ -0.37
COL12A1-207ENST00000483888 TPM3P06753 285 aa12.75□□□□□ -0.37
COL12A1-207ENST00000483888 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
COL12A1-207ENST00000483888 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
COL12A1-207ENST00000483888 ARGLU1Q9NWB6 273 aaPredicted RBP12.74□□□□□ -0.37
COL12A1-207ENST00000483888 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
COL12A1-207ENST00000483888 MRE11P49959 708 aa12.74□□□□□ -0.37
COL12A1-207ENST00000483888 FOXD4L5Q5VV16 416 aaPredicted RBP12.74□□□□□ -0.37
COL12A1-207ENST00000483888 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
COL12A1-207ENST00000483888 BBXQ8WY36 941 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-207ENST00000483888 NASPP49321 788 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-207ENST00000483888 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
COL12A1-207ENST00000483888 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-207ENST00000483888 DEF6Q9H4E7 631 aa12.72□□□□□ -0.37
COL12A1-207ENST00000483888 GOLGA6L19H0YKK7 550 aa12.72□□□□□ -0.37
COL12A1-207ENST00000483888 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-207ENST00000483888 CC2D1BQ5T0F9 858 aaKnown RBP12.72□□□□□ -0.37
COL12A1-207ENST00000483888 CCDC70Q6NSX1 233 aa12.72□□□□□ -0.37
COL12A1-207ENST00000483888 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.37
COL12A1-207ENST00000483888 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.37
COL12A1-207ENST00000483888 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
COL12A1-207ENST00000483888 PMFBP1Q8TBY8 1022 aa12.71□□□□□ -0.37
COL12A1-207ENST00000483888 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.38
COL12A1-207ENST00000483888 UQCRHP07919 91 aa12.71□□□□□ -0.38
COL12A1-207ENST00000483888 LEKR1Q6ZMV7 388 aa12.7□□□□□ -0.38
COL12A1-207ENST00000483888 KIAA1211Q6ZU35 1233 aa12.7□□□□□ -0.38
COL12A1-207ENST00000483888 CCDC191Q8NCU4 936 aa12.69□□□□□ -0.38
COL12A1-207ENST00000483888 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
COL12A1-207ENST00000483888 STK11IPQ8N1F8 1099 aa12.69□□□□□ -0.38
COL12A1-207ENST00000483888 HSP90B2PQ58FF3 399 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 ST18O60284 1047 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 SIN3AQ96ST3 1273 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 AK7Q96M32 723 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 PLCD4Q9BRC7 762 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 ACBD3Q9H3P7 528 aa12.68□□□□□ -0.38
COL12A1-207ENST00000483888 ZHX1Q9UKY1 873 aaPredicted RBP12.67□□□□□ -0.38
COL12A1-207ENST00000483888 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
COL12A1-207ENST00000483888 ERICH4A6NGS2 130 aa12.67□□□□□ -0.38
COL12A1-207ENST00000483888 PLEKHG5O94827 1062 aa12.67□□□□□ -0.38
COL12A1-207ENST00000483888 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
COL12A1-207ENST00000483888 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
COL12A1-207ENST00000483888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL12A1-207ENST00000483888 U2SURPO15042 1029 aaKnown RBP12.66□□□□□ -0.38
COL12A1-207ENST00000483888 CLIP1P30622 1438 aa12.66□□□□□ -0.38
COL12A1-207ENST00000483888 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
COL12A1-207ENST00000483888 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
COL12A1-207ENST00000483888 E9PSI1 815 aa12.65□□□□□ -0.38
COL12A1-207ENST00000483888 NOL8Q76FK4 1167 aaKnown RBP12.65□□□□□ -0.38
COL12A1-207ENST00000483888 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
COL12A1-207ENST00000483888 GPATCH11Q8N954 259 aa12.65□□□□□ -0.38
COL12A1-207ENST00000483888 CHMP4AQ9BY43 222 aa12.65□□□□□ -0.38
COL12A1-207ENST00000483888 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
COL12A1-207ENST00000483888 TSPYL1Q9H0U9 437 aa12.65□□□□□ -0.38
COL12A1-207ENST00000483888 RUFY1Q96T51 708 aa12.65□□□□□ -0.38
COL12A1-207ENST00000483888 CREBRFQ8IUR6 639 aa12.64□□□□□ -0.39
COL12A1-207ENST00000483888 MNS1Q8NEH6 495 aa12.64□□□□□ -0.39
COL12A1-207ENST00000483888 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
COL12A1-207ENST00000483888 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
COL12A1-207ENST00000483888 FOXD4L6Q3SYB3 417 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-207ENST00000483888 FOXD4L3Q6VB84 417 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-207ENST00000483888 BECN2A8MW95 431 aa12.64□□□□□ -0.39
COL12A1-207ENST00000483888 CHMP5Q9NZZ3 219 aa12.64□□□□□ -0.39
COL12A1-207ENST00000483888 IRX3P78415 501 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-207ENST00000483888 CGNQ9P2M7 1197 aaKnown RBP12.63□□□□□ -0.39
COL12A1-207ENST00000483888 CLSTN1O94985 981 aa12.63□□□□□ -0.39
COL12A1-207ENST00000483888 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
COL12A1-207ENST00000483888 APBB1O00213 710 aa12.63□□□□□ -0.39
COL12A1-207ENST00000483888 RRP7BPQ9NSQ0 103 aa12.63□□□□□ -0.39
COL12A1-207ENST00000483888 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-207ENST00000483888 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
COL12A1-207ENST00000483888 ITPRIPQ8IWB1 547 aa12.62□□□□□ -0.39
COL12A1-207ENST00000483888 USP8P40818 1118 aa12.61□□□□□ -0.39
COL12A1-207ENST00000483888 MEX3CQ5U5Q3 659 aaKnown RBP12.61□□□□□ -0.39
COL12A1-207ENST00000483888 RBM25P49756 843 aaKnown RBP12.6□□□□□ -0.39
COL12A1-207ENST00000483888 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
COL12A1-207ENST00000483888 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
COL12A1-207ENST00000483888 GIMAP7Q8NHV1 300 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 412.3 ms