RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 GSE1Q14687 1217 aa9.36□□□□□ -0.91
PKP4-212ENST00000483881 Q6ZNB5 142 aa9.34□□□□□ -0.91
PKP4-212ENST00000483881 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
PKP4-212ENST00000483881 IFFO2Q5TF58 517 aa9.32□□□□□ -0.92
PKP4-212ENST00000483881 HRO43593 1189 aa9.3□□□□□ -0.92
PKP4-212ENST00000483881 NUDT7P0C024 238 aa9.3□□□□□ -0.92
PKP4-212ENST00000483881 LHX6Q9UPM6 363 aa9.3□□□□□ -0.92
PKP4-212ENST00000483881 A0A0G2JS52 829 aa9.29□□□□□ -0.92
PKP4-212ENST00000483881 EFCAB3Q8N7B9 438 aa9.28□□□□□ -0.92
PKP4-212ENST00000483881 ARHGAP33O14559 1287 aa9.26□□□□□ -0.93
PKP4-212ENST00000483881 TK2O00142 265 aa9.23□□□□□ -0.93
PKP4-212ENST00000483881 LCE2BO14633 110 aa9.23□□□□□ -0.93
PKP4-212ENST00000483881 PTPN5P54829 565 aa9.23□□□□□ -0.93
PKP4-212ENST00000483881 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
PKP4-212ENST00000483881 MS4A4AQ96JQ5 239 aa9.18□□□□□ -0.94
PKP4-212ENST00000483881 PSEN2P49810 448 aa9.17□□□□□ -0.94
PKP4-212ENST00000483881 PCDHGA4Q9Y5G9 962 aa9.14□□□□□ -0.95
PKP4-212ENST00000483881 KLHL34Q8N239 644 aa9.13□□□□□ -0.95
PKP4-212ENST00000483881 STAC3Q96MF2 364 aa9.13□□□□□ -0.95
PKP4-212ENST00000483881 TRAF7Q6Q0C0 670 aa9.11□□□□□ -0.95
PKP4-212ENST00000483881 EHMT2Q96KQ7 1210 aa9.09□□□□□ -0.95
PKP4-212ENST00000483881 KIF3CO14782 793 aa9.06□□□□□ -0.96
PKP4-212ENST00000483881 SOX12O15370 315 aa9.06□□□□□ -0.96
PKP4-212ENST00000483881 SLC34A2O95436 690 aa9.06□□□□□ -0.96
PKP4-212ENST00000483881 PHF8Q9UPP1 1060 aa9.06□□□□□ -0.96
PKP4-212ENST00000483881 PSDA5PKW4 1024 aaPredicted RBP9.04□□□□□ -0.96
PKP4-212ENST00000483881 C2orf72A6NCS6 295 aa9.04□□□□□ -0.96
PKP4-212ENST00000483881 THSD4Q6ZMP0 1018 aa9.04□□□□□ -0.96
PKP4-212ENST00000483881 LAPTM4AQ15012 233 aa9.01□□□□□ -0.97
PKP4-212ENST00000483881 ZNF775Q96BV0 537 aaPredicted RBP9.01□□□□□ -0.97
PKP4-212ENST00000483881 KDM4FA0A1W2PPD8 638 aa9□□□□□ -0.97
PKP4-212ENST00000483881 VPS9D1Q9Y2B5 631 aa9□□□□□ -0.97
PKP4-212ENST00000483881 CIZ1Q9ULV3 898 aaPredicted RBP8.99□□□□□ -0.97
PKP4-212ENST00000483881 GFRA3O60609 400 aa8.98□□□□□ -0.97
PKP4-212ENST00000483881 ZNF787Q6DD87 383 aa8.96□□□□□ -0.98
PKP4-212ENST00000483881 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
PKP4-212ENST00000483881 ITGBL1O95965 494 aaPredicted RBP8.93□□□□□ -0.98
PKP4-212ENST00000483881 WNT2BQ93097 391 aa8.93□□□□□ -0.98
PKP4-212ENST00000483881 FBXO3Q9UK99 471 aa8.93□□□□□ -0.98
PKP4-212ENST00000483881 BHMG1C9JSJ3 638 aaPredicted RBP8.92□□□□□ -0.98
PKP4-212ENST00000483881 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
PKP4-212ENST00000483881 PPP4R3BQ5MIZ7 849 aa8.91□□□□□ -0.98
PKP4-212ENST00000483881 FKBP8Q14318 412 aa8.88□□□□□ -0.99
PKP4-212ENST00000483881 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
PKP4-212ENST00000483881 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
PKP4-212ENST00000483881 KCNH8Q96L42 1107 aa8.85□□□□□ -0.99
PKP4-212ENST00000483881 SLC4A5Q9BY07 1137 aa8.85□□□□□ -0.99
PKP4-212ENST00000483881 LOC100996750A0A140TA64 210 aa8.84□□□□□ -0.99
PKP4-212ENST00000483881 NLRP6P59044 892 aa8.84□□□□□ -0.99
PKP4-212ENST00000483881 KRTAP4-6Q9BYQ5 205 aa8.84□□□□□ -0.99
PKP4-212ENST00000483881 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
PKP4-212ENST00000483881 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
PKP4-212ENST00000483881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.82□□□□□ -1
PKP4-212ENST00000483881 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
PKP4-212ENST00000483881 SPOCK2Q92563 424 aa8.82□□□□□ -1
PKP4-212ENST00000483881 ZFP91Q96JP5 570 aaPredicted RBP8.82□□□□□ -1
PKP4-212ENST00000483881 TMC2Q8TDI7 906 aa8.8□□□□□ -1
PKP4-212ENST00000483881 KCNC4Q03721 635 aa8.76□□□□□ -1.01
PKP4-212ENST00000483881 ZBED2Q9BTP6 218 aa8.75□□□□□ -1.01
PKP4-212ENST00000483881 RNF25Q96BH1 459 aaPredicted RBP8.73□□□□□ -1.01
PKP4-212ENST00000483881 RIOK3O14730 519 aaKnown RBP8.72□□□□□ -1.01
PKP4-212ENST00000483881 IFNLR1Q8IU57 520 aaPredicted RBP8.72□□□□□ -1.01
PKP4-212ENST00000483881 MFRPQ9BY79 579 aa8.72□□□□□ -1.01
PKP4-212ENST00000483881 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
PKP4-212ENST00000483881 TRIM41Q8WV44 630 aa8.71□□□□□ -1.02
PKP4-212ENST00000483881 PRKD2Q9BZL6 878 aa8.7□□□□□ -1.02
PKP4-212ENST00000483881 VGFO15240 615 aaPredicted RBP8.69□□□□□ -1.02
PKP4-212ENST00000483881 BCAMP50895 628 aa8.69□□□□□ -1.02
PKP4-212ENST00000483881 NBPF3Q9H094 633 aa8.69□□□□□ -1.02
PKP4-212ENST00000483881 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
PKP4-212ENST00000483881 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
PKP4-212ENST00000483881 PTPREP23469 700 aa8.66□□□□□ -1.02
PKP4-212ENST00000483881 ANKK1Q8NFD2 765 aa8.66□□□□□ -1.02
PKP4-212ENST00000483881 TBC1D12O60347 775 aa8.65□□□□□ -1.02
PKP4-212ENST00000483881 POTECB2RU33 542 aa8.64□□□□□ -1.03
PKP4-212ENST00000483881 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
PKP4-212ENST00000483881 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
PKP4-212ENST00000483881 NYAP1Q6ZVC0 841 aa8.63□□□□□ -1.03
PKP4-212ENST00000483881 PLPP6Q8IY26 295 aa8.63□□□□□ -1.03
PKP4-212ENST00000483881 PDZRN3Q9UPQ7 1066 aa8.63□□□□□ -1.03
PKP4-212ENST00000483881 SOWAHBA6NEL2 793 aa8.62□□□□□ -1.03
PKP4-212ENST00000483881 FOXK1P85037 733 aa8.6□□□□□ -1.03
PKP4-212ENST00000483881 BCL11BQ9C0K0 894 aaPredicted RBP8.6□□□□□ -1.03
PKP4-212ENST00000483881 V9GY48 417 aaPredicted RBP8.6□□□□□ -1.03
PKP4-212ENST00000483881 FOSBP53539 338 aa8.57□□□□□ -1.04
PKP4-212ENST00000483881 STK17AQ9UEE5 414 aa8.55□□□□□ -1.04
PKP4-212ENST00000483881 RABGEF1Q9UJ41 708 aa8.55□□□□□ -1.04
PKP4-212ENST00000483881 STK24Q9Y6E0 443 aa8.55□□□□□ -1.04
PKP4-212ENST00000483881 PPP1R37O75864 691 aa8.53□□□□□ -1.04
PKP4-212ENST00000483881 DSG2Q14126 1118 aa8.53□□□□□ -1.04
PKP4-212ENST00000483881 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
PKP4-212ENST00000483881 PROX2Q3B8N5 592 aa8.52□□□□□ -1.05
PKP4-212ENST00000483881 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
PKP4-212ENST00000483881 ZFRQ96KR1 1074 aaKnown RBP8.52□□□□□ -1.05
PKP4-212ENST00000483881 OXER1Q8TDS5 423 aa8.51□□□□□ -1.05
PKP4-212ENST00000483881 MYT1Q01538 1121 aa8.5□□□□□ -1.05
PKP4-212ENST00000483881 GPHNQ9NQX3 736 aaPredicted RBP8.5□□□□□ -1.05
PKP4-212ENST00000483881 LAPTM4BQ86VI4 370 aa8.49□□□□□ -1.05
PKP4-212ENST00000483881 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
PKP4-212ENST00000483881 ZDHHC16Q969W1 377 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms