RNA–Protein interactions for RNA: ENST00000483732.5

TMEM254-212, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 878 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-212ENST00000483732 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
TMEM254-212ENST00000483732 ARHGAP35Q9NRY4 1499 aa14.06□□□□□ -0.16
TMEM254-212ENST00000483732 PHLDB1Q86UU1 1377 aa14.06□□□□□ -0.16
TMEM254-212ENST00000483732 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
TMEM254-212ENST00000483732 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
TMEM254-212ENST00000483732 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
TMEM254-212ENST00000483732 HECW1Q76N89 1606 aa14.01□□□□□ -0.17
TMEM254-212ENST00000483732 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
TMEM254-212ENST00000483732 NEO1Q92859 1461 aa13.99□□□□□ -0.17
TMEM254-212ENST00000483732 CDK13Q14004 1512 aaKnown RBP13.99□□□□□ -0.17
TMEM254-212ENST00000483732 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
TMEM254-212ENST00000483732 CLIP1P30622 1438 aa13.98□□□□□ -0.17
TMEM254-212ENST00000483732 RAPGEF3O95398 923 aa13.96□□□□□ -0.17
TMEM254-212ENST00000483732 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
TMEM254-212ENST00000483732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.95□□□□□ -0.18
TMEM254-212ENST00000483732 FANCAO15360 1455 aa13.93□□□□□ -0.18
TMEM254-212ENST00000483732 AKNAQ7Z591 1439 aa13.93□□□□□ -0.18
TMEM254-212ENST00000483732 ABCB7O75027 752 aa13.93□□□□□ -0.18
TMEM254-212ENST00000483732 EFCAB2Q5VUJ9 269 aa13.93□□□□□ -0.18
TMEM254-212ENST00000483732 TROQ12816 1431 aaPredicted RBP13.92□□□□□ -0.18
TMEM254-212ENST00000483732 CCDC18Q5T9S5 1454 aa13.92□□□□□ -0.18
TMEM254-212ENST00000483732 DENND4BO75064 1496 aaPredicted RBP13.91□□□□□ -0.18
TMEM254-212ENST00000483732 ADGRL1O94910 1474 aa13.91□□□□□ -0.18
TMEM254-212ENST00000483732 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
TMEM254-212ENST00000483732 PLCH2O75038 1416 aa13.9□□□□□ -0.18
TMEM254-212ENST00000483732 TTC37Q6PGP7 1564 aa13.89□□□□□ -0.19
TMEM254-212ENST00000483732 FYCO1Q9BQS8 1478 aa13.89□□□□□ -0.19
TMEM254-212ENST00000483732 KIF14Q15058 1648 aa13.88□□□□□ -0.19
TMEM254-212ENST00000483732 PCF11O94913 1555 aaKnown RBP13.88□□□□□ -0.19
TMEM254-212ENST00000483732 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
TMEM254-212ENST00000483732 CEP162Q5TB80 1403 aa13.85□□□□□ -0.19
TMEM254-212ENST00000483732 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
TMEM254-212ENST00000483732 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
TMEM254-212ENST00000483732 MYO5CQ9NQX4 1742 aa13.84□□□□□ -0.19
TMEM254-212ENST00000483732 LRRIQ1Q96JM4 1722 aa13.83□□□□□ -0.2
TMEM254-212ENST00000483732 ARHGAP5Q13017 1502 aa13.83□□□□□ -0.2
TMEM254-212ENST00000483732 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
TMEM254-212ENST00000483732 MAGI2Q86UL8 1455 aa13.81□□□□□ -0.2
TMEM254-212ENST00000483732 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
TMEM254-212ENST00000483732 RICTORQ6R327 1708 aa13.8□□□□□ -0.2
TMEM254-212ENST00000483732 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
TMEM254-212ENST00000483732 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
TMEM254-212ENST00000483732 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
TMEM254-212ENST00000483732 ZMYM4Q5VZL5 1548 aa13.77□□□□□ -0.21
TMEM254-212ENST00000483732 ZFYVE16Q7Z3T8 1539 aa13.77□□□□□ -0.21
TMEM254-212ENST00000483732 AFAP1Q8N556 730 aa13.77□□□□□ -0.21
TMEM254-212ENST00000483732 ARHGEF40Q8TER5 1519 aa13.76□□□□□ -0.21
TMEM254-212ENST00000483732 ZNF518AQ6AHZ1 1483 aa13.76□□□□□ -0.21
TMEM254-212ENST00000483732 CCNB3Q8WWL7 1395 aa13.76□□□□□ -0.21
TMEM254-212ENST00000483732 CFDP1Q9UEE9 299 aaPredicted RBP13.76□□□□□ -0.21
TMEM254-212ENST00000483732 YEATS2Q9ULM3 1422 aa13.74□□□□□ -0.21
TMEM254-212ENST00000483732 ATXN8OSP0DMR3 200 aa13.74□□□□□ -0.21
TMEM254-212ENST00000483732 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
TMEM254-212ENST00000483732 ATP10AO60312 1499 aa13.74□□□□□ -0.21
TMEM254-212ENST00000483732 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
TMEM254-212ENST00000483732 PREX2Q70Z35 1606 aa13.73□□□□□ -0.21
TMEM254-212ENST00000483732 MLECQ14165 292 aa13.72□□□□□ -0.21
TMEM254-212ENST00000483732 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
TMEM254-212ENST00000483732 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
TMEM254-212ENST00000483732 ADAMTSL3P82987 1691 aa13.7□□□□□ -0.22
TMEM254-212ENST00000483732 POTEHQ6S545 545 aa13.7□□□□□ -0.22
TMEM254-212ENST00000483732 C9orf84Q5VXU9 1444 aa13.7□□□□□ -0.22
TMEM254-212ENST00000483732 VPS8Q8N3P4 1428 aa13.7□□□□□ -0.22
TMEM254-212ENST00000483732 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
TMEM254-212ENST00000483732 PTPRMP28827 1452 aa13.69□□□□□ -0.22
TMEM254-212ENST00000483732 PLEKHH2Q8IVE3 1493 aa13.69□□□□□ -0.22
TMEM254-212ENST00000483732 HNRNPMP52272 730 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMEM254-212ENST00000483732 TRAPPC8Q9Y2L5 1435 aa13.69□□□□□ -0.22
TMEM254-212ENST00000483732 ABCC1P33527 1531 aa13.69□□□□□ -0.22
TMEM254-212ENST00000483732 EHBP1L1Q8N3D4 1523 aa13.69□□□□□ -0.22
TMEM254-212ENST00000483732 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
TMEM254-212ENST00000483732 KDM5CP41229 1560 aa13.68□□□□□ -0.22
TMEM254-212ENST00000483732 SPAG9O60271 1321 aaKnown RBP13.67□□□□□ -0.22
TMEM254-212ENST00000483732 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
TMEM254-212ENST00000483732 ARHGEF12Q9NZN5 1544 aa13.67□□□□□ -0.22
TMEM254-212ENST00000483732 HECW2Q9P2P5 1572 aa13.66□□□□□ -0.22
TMEM254-212ENST00000483732 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
TMEM254-212ENST00000483732 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
TMEM254-212ENST00000483732 POLA2Q14181 598 aa13.65□□□□□ -0.22
TMEM254-212ENST00000483732 ITSN2Q9NZM3 1697 aa13.65□□□□□ -0.22
TMEM254-212ENST00000483732 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
TMEM254-212ENST00000483732 TIAM1Q13009 1591 aa13.63□□□□□ -0.23
TMEM254-212ENST00000483732 SAMD9LQ8IVG5 1584 aa13.63□□□□□ -0.23
TMEM254-212ENST00000483732 SYCP2Q9BX26 1530 aa13.63□□□□□ -0.23
TMEM254-212ENST00000483732 NCOA2Q15596 1464 aa13.62□□□□□ -0.23
TMEM254-212ENST00000483732 RSPH4AQ5TD94 716 aa13.62□□□□□ -0.23
TMEM254-212ENST00000483732 RIMS1Q86UR5 1692 aaKnown RBP13.62□□□□□ -0.23
TMEM254-212ENST00000483732 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
TMEM254-212ENST00000483732 ZNF644Q9H582 1327 aaPredicted RBP13.62□□□□□ -0.23
TMEM254-212ENST00000483732 SUPT6HQ7KZ85 1726 aaKnown RBP13.61□□□□□ -0.23
TMEM254-212ENST00000483732 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
TMEM254-212ENST00000483732 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
TMEM254-212ENST00000483732 REREQ9P2R6 1566 aa13.6□□□□□ -0.23
TMEM254-212ENST00000483732 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
TMEM254-212ENST00000483732 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
TMEM254-212ENST00000483732 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
TMEM254-212ENST00000483732 AGLP35573 1532 aa13.58□□□□□ -0.24
TMEM254-212ENST00000483732 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
TMEM254-212ENST00000483732 KIDINS220Q9ULH0 1771 aa13.58□□□□□ -0.24
TMEM254-212ENST00000483732 TSPY4P0CV99 314 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms