RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 RAPGEF3O95398 923 aa21.21■□□□□ 0.99
SSR1-208ENST00000483409 ADGRL1O94910 1474 aa21.2■□□□□ 0.98
SSR1-208ENST00000483409 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
SSR1-208ENST00000483409 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
SSR1-208ENST00000483409 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
SSR1-208ENST00000483409 SCAPERQ9BY12 1400 aa21.16■□□□□ 0.98
SSR1-208ENST00000483409 GPATCH8Q9UKJ3 1502 aaKnown RBP21.15■□□□□ 0.98
SSR1-208ENST00000483409 MAP3K1Q13233 1512 aa21.14■□□□□ 0.98
SSR1-208ENST00000483409 LRRC9Q6ZRR7 1453 aa21.14■□□□□ 0.98
SSR1-208ENST00000483409 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
SSR1-208ENST00000483409 CCNB3Q8WWL7 1395 aa21.13■□□□□ 0.97
SSR1-208ENST00000483409 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
SSR1-208ENST00000483409 ABCC1P33527 1531 aa21.12■□□□□ 0.97
SSR1-208ENST00000483409 NCOA2Q15596 1464 aa21.12■□□□□ 0.97
SSR1-208ENST00000483409 ZMYM4Q5VZL5 1548 aa21.11■□□□□ 0.97
SSR1-208ENST00000483409 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
SSR1-208ENST00000483409 KANK4Q5T7N3 995 aaPredicted RBP21.09■□□□□ 0.97
SSR1-208ENST00000483409 ARHGEF40Q8TER5 1519 aa21.09■□□□□ 0.97
SSR1-208ENST00000483409 APLP2Q06481 763 aa21.08■□□□□ 0.97
SSR1-208ENST00000483409 ZNF777Q9ULD5 760 aaPredicted RBP21.08■□□□□ 0.97
SSR1-208ENST00000483409 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
SSR1-208ENST00000483409 CFDP1Q9UEE9 299 aaPredicted RBP21.06■□□□□ 0.96
SSR1-208ENST00000483409 ZNF518AQ6AHZ1 1483 aa21.06■□□□□ 0.96
SSR1-208ENST00000483409 ZFYVE16Q7Z3T8 1539 aa21.05■□□□□ 0.96
SSR1-208ENST00000483409 SYCP2Q9BX26 1530 aa21.05■□□□□ 0.96
SSR1-208ENST00000483409 KDM5CP41229 1560 aa21.04■□□□□ 0.96
SSR1-208ENST00000483409 YEATS2Q9ULM3 1422 aa21.03■□□□□ 0.96
SSR1-208ENST00000483409 TRAPPC8Q9Y2L5 1435 aa21.03■□□□□ 0.96
SSR1-208ENST00000483409 AFAP1Q8N556 730 aa21.02■□□□□ 0.96
SSR1-208ENST00000483409 HECW2Q9P2P5 1572 aa21.02■□□□□ 0.95
SSR1-208ENST00000483409 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
SSR1-208ENST00000483409 KDM4FA0A1W2PPD8 638 aa21■□□□□ 0.95
SSR1-208ENST00000483409 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
SSR1-208ENST00000483409 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.95
SSR1-208ENST00000483409 ZNF644Q9H582 1327 aaPredicted RBP20.98■□□□□ 0.95
SSR1-208ENST00000483409 SIGLEC1Q9BZZ2 1709 aa20.97■□□□□ 0.95
SSR1-208ENST00000483409 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
SSR1-208ENST00000483409 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
SSR1-208ENST00000483409 MYT1LQ9UL68 1186 aa20.96■□□□□ 0.95
SSR1-208ENST00000483409 CAMSAP2Q08AD1 1489 aa20.95■□□□□ 0.94
SSR1-208ENST00000483409 KIDINS220Q9ULH0 1771 aa20.95■□□□□ 0.94
SSR1-208ENST00000483409 ABCA6Q8N139 1617 aa20.95■□□□□ 0.94
SSR1-208ENST00000483409 MLH3Q9UHC1 1453 aa20.94■□□□□ 0.94
SSR1-208ENST00000483409 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
SSR1-208ENST00000483409 ARID4BQ4LE39 1312 aaPredicted RBP20.93■□□□□ 0.94
SSR1-208ENST00000483409 MYOM3Q5VTT5 1437 aa20.92■□□□□ 0.94
SSR1-208ENST00000483409 ATP10AO60312 1499 aa20.92■□□□□ 0.94
SSR1-208ENST00000483409 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
SSR1-208ENST00000483409 MBD5Q9P267 1494 aa20.9■□□□□ 0.94
SSR1-208ENST00000483409 C9orf84Q5VXU9 1444 aa20.9■□□□□ 0.94
SSR1-208ENST00000483409 INO80Q9ULG1 1556 aaPredicted RBP20.89■□□□□ 0.94
SSR1-208ENST00000483409 ADAMTSL3P82987 1691 aa20.89■□□□□ 0.93
SSR1-208ENST00000483409 ATP7AQ04656 1500 aa20.88■□□□□ 0.93
SSR1-208ENST00000483409 SPAG9O60271 1321 aaKnown RBP20.88■□□□□ 0.93
SSR1-208ENST00000483409 MIA2Q96PC5 1412 aa20.87■□□□□ 0.93
SSR1-208ENST00000483409 CCDC141Q6ZP82 1450 aa20.86■□□□□ 0.93
SSR1-208ENST00000483409 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
SSR1-208ENST00000483409 PTPN23Q9H3S7 1636 aa20.85■□□□□ 0.93
SSR1-208ENST00000483409 ARHGEF5Q12774 1597 aa20.85■□□□□ 0.93
SSR1-208ENST00000483409 REREQ9P2R6 1566 aa20.85■□□□□ 0.93
SSR1-208ENST00000483409 FGD6Q6ZV73 1430 aa20.81■□□□□ 0.92
SSR1-208ENST00000483409 FER1L4A9Z1Z3 1794 aa20.81■□□□□ 0.92
SSR1-208ENST00000483409 RIMS1Q86UR5 1692 aaKnown RBP20.8■□□□□ 0.92
SSR1-208ENST00000483409 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
SSR1-208ENST00000483409 MLECQ14165 292 aa20.8■□□□□ 0.92
SSR1-208ENST00000483409 PPARGC1BQ86YN6 1023 aaKnown RBP20.79■□□□□ 0.92
SSR1-208ENST00000483409 RSPH4AQ5TD94 716 aa20.77■□□□□ 0.92
SSR1-208ENST00000483409 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
SSR1-208ENST00000483409 AGLP35573 1532 aa20.76■□□□□ 0.91
SSR1-208ENST00000483409 CROCC2H7BZ55 1655 aa20.76■□□□□ 0.91
SSR1-208ENST00000483409 PLXNC1O60486 1568 aa20.76■□□□□ 0.91
SSR1-208ENST00000483409 A2MP01023 1474 aa20.75■□□□□ 0.91
SSR1-208ENST00000483409 TCOF1Q13428 1488 aaKnown RBP20.75■□□□□ 0.91
SSR1-208ENST00000483409 MAST1Q9Y2H9 1570 aa20.74■□□□□ 0.91
SSR1-208ENST00000483409 PTPRMP28827 1452 aa20.74■□□□□ 0.91
SSR1-208ENST00000483409 TSPY4P0CV99 314 aa20.73■□□□□ 0.91
SSR1-208ENST00000483409 TSPY10P0CW01 314 aa20.73■□□□□ 0.91
SSR1-208ENST00000483409 DNMT1P26358 1616 aaKnown RBP20.72■□□□□ 0.91
SSR1-208ENST00000483409 ABCC5O15440 1437 aa20.7■□□□□ 0.9
SSR1-208ENST00000483409 DAPK1P53355 1430 aa20.69■□□□□ 0.9
SSR1-208ENST00000483409 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
SSR1-208ENST00000483409 SHANK2Q9UPX8 1470 aa20.67■□□□□ 0.9
SSR1-208ENST00000483409 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
SSR1-208ENST00000483409 DHX29Q7Z478 1369 aaKnown RBP20.65■□□□□ 0.9
SSR1-208ENST00000483409 CLTCQ00610 1675 aaKnown RBP20.61■□□□□ 0.89
SSR1-208ENST00000483409 C3P01024 1663 aa20.61■□□□□ 0.89
SSR1-208ENST00000483409 GGT6Q6P531 493 aa20.6■□□□□ 0.89
SSR1-208ENST00000483409 ESF1Q9H501 851 aaKnown RBP20.6■□□□□ 0.89
SSR1-208ENST00000483409 CHIC2Q9UKJ5 165 aa20.59■□□□□ 0.89
SSR1-208ENST00000483409 KIF15Q9NS87 1388 aa20.59■□□□□ 0.89
SSR1-208ENST00000483409 DUOX2Q9NRD8 1548 aa20.58■□□□□ 0.89
SSR1-208ENST00000483409 MROH2AA6NES4 1674 aa20.58■□□□□ 0.89
SSR1-208ENST00000483409 EIF2AK4Q9P2K8 1649 aaKnown RBP20.58■□□□□ 0.89
SSR1-208ENST00000483409 KIF3BO15066 747 aa20.58■□□□□ 0.89
SSR1-208ENST00000483409 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
SSR1-208ENST00000483409 CNTLNQ9NXG0 1405 aa20.57■□□□□ 0.88
SSR1-208ENST00000483409 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
SSR1-208ENST00000483409 RNF17Q9BXT8 1623 aaKnown RBP20.55■□□□□ 0.88
SSR1-208ENST00000483409 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
SSR1-208ENST00000483409 ADGRL2O95490 1459 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms