RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 EMP3P54852 163 aa14.04□□□□□ -0.16
PMS1-219ENST00000483293 MFRPQ9BY79 579 aa14.03□□□□□ -0.16
PMS1-219ENST00000483293 PHF8Q9UPP1 1060 aa14.02□□□□□ -0.17
PMS1-219ENST00000483293 HS3ST6Q96QI5 342 aa14.01□□□□□ -0.17
PMS1-219ENST00000483293 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
PMS1-219ENST00000483293 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
PMS1-219ENST00000483293 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
PMS1-219ENST00000483293 SOX12O15370 315 aa13.96□□□□□ -0.17
PMS1-219ENST00000483293 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
PMS1-219ENST00000483293 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
PMS1-219ENST00000483293 NLRP6P59044 892 aa13.95□□□□□ -0.18
PMS1-219ENST00000483293 PPP1R37O75864 691 aa13.93□□□□□ -0.18
PMS1-219ENST00000483293 FBXO22Q8NEZ5 403 aa13.92□□□□□ -0.18
PMS1-219ENST00000483293 PDCD7Q8N8D1 485 aaKnown RBP13.88□□□□□ -0.19
PMS1-219ENST00000483293 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
PMS1-219ENST00000483293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.192e-8■■■□□ 16.8
PMS1-219ENST00000483293 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
PMS1-219ENST00000483293 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
PMS1-219ENST00000483293 DPY19L2Q6NUT2 758 aa13.8□□□□□ -0.2
PMS1-219ENST00000483293 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
PMS1-219ENST00000483293 RNF166Q96A37 237 aaPredicted RBP13.74□□□□□ -0.21
PMS1-219ENST00000483293 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
PMS1-219ENST00000483293 HOXB3P14651 431 aaPredicted RBP13.68□□□□□ -0.22
PMS1-219ENST00000483293 WDR70Q9NW82 654 aa13.66□□□□□ -0.22
PMS1-219ENST00000483293 HOXB1P14653 301 aaPredicted RBP13.62□□□□□ -0.23
PMS1-219ENST00000483293 G3V3G9 751 aa13.6□□□□□ -0.23
PMS1-219ENST00000483293 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
PMS1-219ENST00000483293 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
PMS1-219ENST00000483293 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
PMS1-219ENST00000483293 BOLA1Q9Y3E2 137 aa13.59□□□□□ -0.23
PMS1-219ENST00000483293 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
PMS1-219ENST00000483293 ERBB3P21860 1342 aa13.57□□□□□ -0.24
PMS1-219ENST00000483293 PDE4AP27815 886 aa13.56□□□□□ -0.24
PMS1-219ENST00000483293 BCANQ96GW7 911 aa13.56□□□□□ -0.24
PMS1-219ENST00000483293 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
PMS1-219ENST00000483293 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
PMS1-219ENST00000483293 VARS2Q5ST30 1063 aaKnown RBP13.48□□□□□ -0.25
PMS1-219ENST00000483293 DDX27Q96GQ7 796 aaKnown RBP13.48□□□□□ -0.25
PMS1-219ENST00000483293 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
PMS1-219ENST00000483293 NBR1Q14596 966 aa13.46□□□□□ -0.25
PMS1-219ENST00000483293 TMC2Q8TDI7 906 aa13.46□□□□□ -0.25
PMS1-219ENST00000483293 E2F4Q16254 413 aa13.45□□□□□ -0.26
PMS1-219ENST00000483293 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
PMS1-219ENST00000483293 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
PMS1-219ENST00000483293 C2orf72A6NCS6 295 aa13.42□□□□□ -0.26
PMS1-219ENST00000483293 MFSD10Q14728 455 aa13.42□□□□□ -0.26
PMS1-219ENST00000483293 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
PMS1-219ENST00000483293 DSG2Q14126 1118 aa13.41□□□□□ -0.26
PMS1-219ENST00000483293 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
PMS1-219ENST00000483293 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
PMS1-219ENST00000483293 ZNF687Q8N1G0 1237 aa13.41□□□□□ -0.26
PMS1-219ENST00000483293 PTGER2P43116 358 aa13.37□□□□□ -0.27
PMS1-219ENST00000483293 PLPP6Q8IY26 295 aa13.35□□□□□ -0.27
PMS1-219ENST00000483293 FOXK1P85037 733 aa13.33□□□□□ -0.28
PMS1-219ENST00000483293 KIF3CO14782 793 aa13.32□□□□□ -0.28
PMS1-219ENST00000483293 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
PMS1-219ENST00000483293 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
PMS1-219ENST00000483293 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
PMS1-219ENST00000483293 CAMK2BQ13554 666 aa13.28□□□□□ -0.28
PMS1-219ENST00000483293 GPR153Q6NV75 609 aa13.27□□□□□ -0.29
PMS1-219ENST00000483293 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.29
PMS1-219ENST00000483293 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
PMS1-219ENST00000483293 DPYSL4O14531 572 aa13.25□□□□□ -0.29
PMS1-219ENST00000483293 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
PMS1-219ENST00000483293 ANKRD13DQ6ZTN6 518 aa13.25□□□□□ -0.29
PMS1-219ENST00000483293 SEMA3EO15041 775 aa13.24□□□□□ -0.29
PMS1-219ENST00000483293 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
PMS1-219ENST00000483293 PLA2G2EQ9NZK7 142 aa13.2□□□□□ -0.3
PMS1-219ENST00000483293 MAP3K9P80192 1104 aa13.19□□□□□ -0.3
PMS1-219ENST00000483293 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
PMS1-219ENST00000483293 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
PMS1-219ENST00000483293 MLLT3P42568 568 aaPredicted RBP13.11□□□□□ -0.31
PMS1-219ENST00000483293 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
PMS1-219ENST00000483293 OXER1Q8TDS5 423 aa13.11□□□□□ -0.31
PMS1-219ENST00000483293 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
PMS1-219ENST00000483293 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
PMS1-219ENST00000483293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.08□□□□□ -0.32
PMS1-219ENST00000483293 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
PMS1-219ENST00000483293 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
PMS1-219ENST00000483293 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
PMS1-219ENST00000483293 TBC1D12O60347 775 aa13.06□□□□□ -0.32
PMS1-219ENST00000483293 PDIA6Q15084 440 aa13.06□□□□□ -0.32
PMS1-219ENST00000483293 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.32
PMS1-219ENST00000483293 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
PMS1-219ENST00000483293 EVI5O60447 810 aa13.04□□□□□ -0.32
PMS1-219ENST00000483293 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
PMS1-219ENST00000483293 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
PMS1-219ENST00000483293 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.33
PMS1-219ENST00000483293 DDX12PQ92771 950 aa13.02□□□□□ -0.33
PMS1-219ENST00000483293 PCDHGA4Q9Y5G9 962 aa13.02□□□□□ -0.33
PMS1-219ENST00000483293 SLC34A2O95436 690 aa13.01□□□□□ -0.33
PMS1-219ENST00000483293 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
PMS1-219ENST00000483293 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
PMS1-219ENST00000483293 PBX2P40425 430 aa12.95□□□□□ -0.34
PMS1-219ENST00000483293 NUDT7P0C024 238 aa12.94□□□□□ -0.34
PMS1-219ENST00000483293 AXIN2Q9Y2T1 843 aa12.93□□□□□ -0.34
PMS1-219ENST00000483293 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
PMS1-219ENST00000483293 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
PMS1-219ENST00000483293 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
PMS1-219ENST00000483293 OSBPP22059 807 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms