RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
COMMD6-210ENST00000483290 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
COMMD6-210ENST00000483290 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
COMMD6-210ENST00000483290 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
COMMD6-210ENST00000483290 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
COMMD6-210ENST00000483290 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
COMMD6-210ENST00000483290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.72□□□□□ -0.53
COMMD6-210ENST00000483290 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
COMMD6-210ENST00000483290 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
COMMD6-210ENST00000483290 NLRP6P59044 892 aa11.68□□□□□ -0.54
COMMD6-210ENST00000483290 PBX2P40425 430 aa11.66□□□□□ -0.54
COMMD6-210ENST00000483290 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
COMMD6-210ENST00000483290 KHSRPQ92945 711 aaKnown RBP eCLIP11.65□□□□□ -0.54
COMMD6-210ENST00000483290 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
COMMD6-210ENST00000483290 NUDT7P0C024 238 aa11.59□□□□□ -0.55
COMMD6-210ENST00000483290 PLA2G2EQ9NZK7 142 aa11.58□□□□□ -0.56
COMMD6-210ENST00000483290 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
COMMD6-210ENST00000483290 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
COMMD6-210ENST00000483290 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
COMMD6-210ENST00000483290 C2orf72A6NCS6 295 aa11.54□□□□□ -0.56
COMMD6-210ENST00000483290 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
COMMD6-210ENST00000483290 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
COMMD6-210ENST00000483290 KIF3CO14782 793 aa11.52□□□□□ -0.57
COMMD6-210ENST00000483290 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
COMMD6-210ENST00000483290 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
COMMD6-210ENST00000483290 PSDA5PKW4 1024 aaPredicted RBP11.5□□□□□ -0.57
COMMD6-210ENST00000483290 SLC34A2O95436 690 aa11.5□□□□□ -0.57
COMMD6-210ENST00000483290 TMC2Q8TDI7 906 aa11.5□□□□□ -0.57
COMMD6-210ENST00000483290 ADGRD1Q6QNK2 874 aa11.47□□□□□ -0.57
COMMD6-210ENST00000483290 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
COMMD6-210ENST00000483290 STK25O00506 426 aa11.46□□□□□ -0.57
COMMD6-210ENST00000483290 ARHGAP33O14559 1287 aa11.46□□□□□ -0.57
COMMD6-210ENST00000483290 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
COMMD6-210ENST00000483290 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
COMMD6-210ENST00000483290 TK2O00142 265 aa11.4□□□□□ -0.58
COMMD6-210ENST00000483290 KCNH8Q96L42 1107 aa11.36□□□□□ -0.59
COMMD6-210ENST00000483290 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
COMMD6-210ENST00000483290 KCTD12Q96CX2 325 aaKnown RBP11.33□□□□□ -0.6
COMMD6-210ENST00000483290 HRO43593 1189 aa11.32□□□□□ -0.6
COMMD6-210ENST00000483290 ECM2O94769 699 aaPredicted RBP11.32□□□□□ -0.6
COMMD6-210ENST00000483290 PSEN2P49810 448 aa11.31□□□□□ -0.6
COMMD6-210ENST00000483290 DMRTA1Q5VZB9 504 aa11.3□□□□□ -0.6
COMMD6-210ENST00000483290 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
COMMD6-210ENST00000483290 TBC1D12O60347 775 aa11.29□□□□□ -0.6
COMMD6-210ENST00000483290 KDM4FA0A1W2PPD8 638 aa11.25□□□□□ -0.61
COMMD6-210ENST00000483290 RGS20O76081 388 aa11.23□□□□□ -0.61
COMMD6-210ENST00000483290 FOXK1P85037 733 aa11.23□□□□□ -0.61
COMMD6-210ENST00000483290 PLPP6Q8IY26 295 aa11.23□□□□□ -0.61
COMMD6-210ENST00000483290 KCNK17Q96T54 332 aa11.23□□□□□ -0.61
COMMD6-210ENST00000483290 PPP1R37O75864 691 aa11.21□□□□□ -0.61
COMMD6-210ENST00000483290 PTPN5P54829 565 aa11.21□□□□□ -0.61
COMMD6-210ENST00000483290 IRX2Q9BZI1 471 aaPredicted RBP11.18□□□□□ -0.62
COMMD6-210ENST00000483290 GPHNQ9NQX3 736 aaPredicted RBP11.18□□□□□ -0.62
COMMD6-210ENST00000483290 GOLGA8CPA6NN73 597 aa11.16□□□□□ -0.62
COMMD6-210ENST00000483290 RGL2O15211 777 aa11.16□□□□□ -0.62
COMMD6-210ENST00000483290 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
COMMD6-210ENST00000483290 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
COMMD6-210ENST00000483290 DSG2Q14126 1118 aa11.13□□□□□ -0.63
COMMD6-210ENST00000483290 ZNF454Q8N9F8 522 aa11.12□□□□□ -0.63
COMMD6-210ENST00000483290 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
COMMD6-210ENST00000483290 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
COMMD6-210ENST00000483290 A0A0G2JS52 829 aa11.09□□□□□ -0.63
COMMD6-210ENST00000483290 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
COMMD6-210ENST00000483290 PTPREP23469 700 aa11.08□□□□□ -0.64
COMMD6-210ENST00000483290 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
COMMD6-210ENST00000483290 WNT2BQ93097 391 aa11.08□□□□□ -0.64
COMMD6-210ENST00000483290 PKD2Q13563 968 aa11.06□□□□□ -0.64
COMMD6-210ENST00000483290 UPF1Q92900 1129 aaKnown RBP eCLIP11.06□□□□□ -0.64
COMMD6-210ENST00000483290 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
COMMD6-210ENST00000483290 NBPF3Q9H094 633 aa11.05□□□□□ -0.64
COMMD6-210ENST00000483290 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
COMMD6-210ENST00000483290 FOSBP53539 338 aa11□□□□□ -0.65
COMMD6-210ENST00000483290 ZBED2Q9BTP6 218 aa11□□□□□ -0.65
COMMD6-210ENST00000483290 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
COMMD6-210ENST00000483290 JPH4Q96JJ6 628 aa10.97□□□□□ -0.65
COMMD6-210ENST00000483290 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
COMMD6-210ENST00000483290 PPP1R15BQ5SWA1 713 aa10.96□□□□□ -0.65
COMMD6-210ENST00000483290 RYDENQ9NUL5 291 aaKnown RBP10.96□□□□□ -0.65
COMMD6-210ENST00000483290 ZDHHC16Q969W1 377 aa10.95□□□□□ -0.66
COMMD6-210ENST00000483290 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
COMMD6-210ENST00000483290 Q6ZNB5 142 aa10.92□□□□□ -0.66
COMMD6-210ENST00000483290 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
COMMD6-210ENST00000483290 EVI5O60447 810 aa10.9□□□□□ -0.66
COMMD6-210ENST00000483290 ANO8Q9HCE9 1232 aaPredicted RBP10.9□□□□□ -0.66
COMMD6-210ENST00000483290 PDE4AP27815 886 aa10.89□□□□□ -0.67
COMMD6-210ENST00000483290 ADAM33Q9BZ11 813 aa10.89□□□□□ -0.67
COMMD6-210ENST00000483290 ITGBL1O95965 494 aaPredicted RBP10.88□□□□□ -0.67
COMMD6-210ENST00000483290 CHGAP10645 457 aaKnown RBP10.88□□□□□ -0.67
COMMD6-210ENST00000483290 PPP1R3GB7ZBB8 358 aa10.87□□□□□ -0.67
COMMD6-210ENST00000483290 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
COMMD6-210ENST00000483290 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
COMMD6-210ENST00000483290 MAP3K9P80192 1104 aa10.84□□□□□ -0.67
COMMD6-210ENST00000483290 LAPTM4BQ86VI4 370 aa10.83□□□□□ -0.68
COMMD6-210ENST00000483290 SOWAHBA6NEL2 793 aa10.81□□□□□ -0.68
COMMD6-210ENST00000483290 BCAMP50895 628 aa10.81□□□□□ -0.68
COMMD6-210ENST00000483290 KCNC4Q03721 635 aa10.81□□□□□ -0.68
COMMD6-210ENST00000483290 LAPTM4AQ15012 233 aa10.81□□□□□ -0.68
COMMD6-210ENST00000483290 PROX2Q3B8N5 592 aa10.79□□□□□ -0.68
COMMD6-210ENST00000483290 FBXW7Q969H0 707 aa10.79□□□□□ -0.68
COMMD6-210ENST00000483290 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms