RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 L3MBTL3Q96JM7 780 aaPredicted RBP8.01□□□□□ -1.13
CLCC1-209ENST00000482889 MS4A4AQ96JQ5 239 aa8□□□□□ -1.13
CLCC1-209ENST00000482889 DPY19L2Q6NUT2 758 aa7.98□□□□□ -1.13
CLCC1-209ENST00000482889 RYDENQ9NUL5 291 aaKnown RBP7.97□□□□□ -1.13
CLCC1-209ENST00000482889 TMEM121BQ9BXQ6 578 aaPredicted RBP7.95□□□□□ -1.14
CLCC1-209ENST00000482889 BOLA1Q9Y3E2 137 aa7.95□□□□□ -1.14
CLCC1-209ENST00000482889 GTPBP6O43824 516 aaPredicted RBP7.94□□□□□ -1.14
CLCC1-209ENST00000482889 G3V3G9 751 aa7.93□□□□□ -1.14
CLCC1-209ENST00000482889 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.92□□□□□ -1.14
CLCC1-209ENST00000482889 C3orf67Q6ZVT6 689 aa7.91□□□□□ -1.14
CLCC1-209ENST00000482889 CDAN1Q8IWY9 1227 aa7.91□□□□□ -1.14
CLCC1-209ENST00000482889 MICALL2Q8IY33 904 aa7.91□□□□□ -1.14
CLCC1-209ENST00000482889 PPP1R37O75864 691 aa7.87□□□□□ -1.15
CLCC1-209ENST00000482889 SLAIN1Q8ND83 568 aa7.86□□□□□ -1.15
CLCC1-209ENST00000482889 NBR1Q14596 966 aa7.81□□□□□ -1.16
CLCC1-209ENST00000482889 ST18O60284 1047 aa7.8□□□□□ -1.16
CLCC1-209ENST00000482889 TMEM92Q6UXU6 159 aa7.8□□□□□ -1.16
CLCC1-209ENST00000482889 KIF3CO14782 793 aa7.79□□□□□ -1.16
CLCC1-209ENST00000482889 SNPHO15079 494 aa7.78□□□□□ -1.16
CLCC1-209ENST00000482889 C2orf72A6NCS6 295 aa7.75□□□□□ -1.17
CLCC1-209ENST00000482889 MMRN1Q13201 1228 aa7.75□□□□□ -1.17
CLCC1-209ENST00000482889 CADPS2Q86UW7 1296 aa7.75□□□□□ -1.17
CLCC1-209ENST00000482889 TMC2Q8TDI7 906 aa7.75□□□□□ -1.17
CLCC1-209ENST00000482889 GPHNQ9NQX3 736 aaPredicted RBP7.74□□□□□ -1.17
CLCC1-209ENST00000482889 CRISPLD2Q9H0B8 497 aa7.73□□□□□ -1.17
CLCC1-209ENST00000482889 SPNS2Q8IVW8 549 aa7.72□□□□□ -1.17
CLCC1-209ENST00000482889 HOXB3P14651 431 aaPredicted RBP7.71□□□□□ -1.18
CLCC1-209ENST00000482889 PDE4AP27815 886 aa7.71□□□□□ -1.18
CLCC1-209ENST00000482889 FOXK1P85037 733 aa7.71□□□□□ -1.18
CLCC1-209ENST00000482889 DOK7Q18PE1 504 aa7.71□□□□□ -1.18
CLCC1-209ENST00000482889 MARVELD3Q96A59 401 aa7.71□□□□□ -1.18
CLCC1-209ENST00000482889 NCKAP5LQ9HCH0 1330 aa7.7□□□□□ -1.18
CLCC1-209ENST00000482889 SLC34A2O95436 690 aa7.68□□□□□ -1.18
CLCC1-209ENST00000482889 MFSD10Q14728 455 aa7.68□□□□□ -1.18
CLCC1-209ENST00000482889 ZSWIM6Q9HCJ5 1215 aa7.68□□□□□ -1.18
CLCC1-209ENST00000482889 TIMELESSQ9UNS1 1208 aa7.68□□□□□ -1.18
CLCC1-209ENST00000482889 RIMBP2O15034 1052 aa7.67□□□□□ -1.18
CLCC1-209ENST00000482889 DSG2Q14126 1118 aa7.67□□□□□ -1.18
CLCC1-209ENST00000482889 PLPP6Q8IY26 295 aa7.66□□□□□ -1.18
CLCC1-209ENST00000482889 PPP1R15BQ5SWA1 713 aa7.65□□□□□ -1.18
CLCC1-209ENST00000482889 ZNF710Q8N1W2 664 aa7.65□□□□□ -1.18
CLCC1-209ENST00000482889 HOXB1P14653 301 aaPredicted RBP7.64□□□□□ -1.19
CLCC1-209ENST00000482889 KCNV2Q8TDN2 545 aa7.64□□□□□ -1.19
CLCC1-209ENST00000482889 DDX27Q96GQ7 796 aaKnown RBP7.64□□□□□ -1.19
CLCC1-209ENST00000482889 LARP6Q9BRS8 491 aaKnown RBP7.64□□□□□ -1.19
CLCC1-209ENST00000482889 TULP1O00294 542 aaPredicted RBP7.63□□□□□ -1.19
CLCC1-209ENST00000482889 GPR153Q6NV75 609 aa7.62□□□□□ -1.19
CLCC1-209ENST00000482889 PTCD2Q8WV60 388 aaKnown RBP7.62□□□□□ -1.19
CLCC1-209ENST00000482889 GTF3C3Q9Y5Q9 886 aa7.61□□□□□ -1.19
CLCC1-209ENST00000482889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.6□□□□□ -1.19
CLCC1-209ENST00000482889 PCDHGA4Q9Y5G9 962 aa7.59□□□□□ -1.19
CLCC1-209ENST00000482889 CAMK2BQ13554 666 aa7.58□□□□□ -1.2
CLCC1-209ENST00000482889 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
CLCC1-209ENST00000482889 TBC1D12O60347 775 aa7.57□□□□□ -1.2
CLCC1-209ENST00000482889 EMP3P54852 163 aa7.57□□□□□ -1.2
CLCC1-209ENST00000482889 ARSIQ5FYB1 569 aa7.57□□□□□ -1.2
CLCC1-209ENST00000482889 POTEB3A0JP26 581 aa7.56□□□□□ -1.2
CLCC1-209ENST00000482889 LMOD2Q6P5Q4 547 aa7.56□□□□□ -1.2
CLCC1-209ENST00000482889 POTEBQ6S5H4 581 aa7.56□□□□□ -1.2
CLCC1-209ENST00000482889 KDM4FA0A1W2PPD8 638 aa7.55□□□□□ -1.2
CLCC1-209ENST00000482889 WDR70Q9NW82 654 aa7.54□□□□□ -1.2
CLCC1-209ENST00000482889 P3H3Q8IVL6 736 aa7.53□□□□□ -1.2
CLCC1-209ENST00000482889 KHSRPQ92945 711 aaKnown RBP eCLIP7.53□□□□□ -1.26e-8■□□□□ 10.2
CLCC1-209ENST00000482889 EMILIN3Q9NT22 766 aa7.53□□□□□ -1.2
CLCC1-209ENST00000482889 FAM205CA6NFA0 338 aa7.52□□□□□ -1.21
CLCC1-209ENST00000482889 NUDT7P0C024 238 aa7.52□□□□□ -1.21
CLCC1-209ENST00000482889 E2F4Q16254 413 aa7.52□□□□□ -1.21
CLCC1-209ENST00000482889 UPF1Q92900 1129 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLCC1-209ENST00000482889 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
CLCC1-209ENST00000482889 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
CLCC1-209ENST00000482889 ZNF316A6NFI3 1004 aaPredicted RBP7.51□□□□□ -1.21
CLCC1-209ENST00000482889 HS3ST6Q96QI5 342 aa7.51□□□□□ -1.21
CLCC1-209ENST00000482889 ARIH1Q9Y4X5 557 aaPredicted RBP7.51□□□□□ -1.21
CLCC1-209ENST00000482889 ERBB3P21860 1342 aa7.51□□□□□ -1.21
CLCC1-209ENST00000482889 PSDA5PKW4 1024 aaPredicted RBP7.5□□□□□ -1.21
CLCC1-209ENST00000482889 TMEM132AQ24JP5 1023 aa7.5□□□□□ -1.21
CLCC1-209ENST00000482889 SEMA3EO15041 775 aa7.49□□□□□ -1.21
CLCC1-209ENST00000482889 MAP3K9P80192 1104 aa7.49□□□□□ -1.21
CLCC1-209ENST00000482889 ANO8Q9HCE9 1232 aaPredicted RBP7.49□□□□□ -1.21
CLCC1-209ENST00000482889 BRPF1P55201 1214 aaPredicted RBP7.48□□□□□ -1.21
CLCC1-209ENST00000482889 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
CLCC1-209ENST00000482889 EVI5O60447 810 aa7.47□□□□□ -1.21
CLCC1-209ENST00000482889 VARS2Q5ST30 1063 aaKnown RBP7.47□□□□□ -1.21
CLCC1-209ENST00000482889 ZC3H15Q8WU90 426 aaKnown RBP7.47□□□□□ -1.21
CLCC1-209ENST00000482889 ARHGEF1Q92888 912 aaKnown RBP7.46□□□□□ -1.22
CLCC1-209ENST00000482889 DPYSL4O14531 572 aa7.45□□□□□ -1.22
CLCC1-209ENST00000482889 ZNF687Q8N1G0 1237 aa7.45□□□□□ -1.22
CLCC1-209ENST00000482889 TESPA1A2RU30 521 aaPredicted RBP7.44□□□□□ -1.22
CLCC1-209ENST00000482889 SPDYE16A6NNV3 312 aaPredicted RBP7.44□□□□□ -1.22
CLCC1-209ENST00000482889 PDIA6Q15084 440 aa7.44□□□□□ -1.22
CLCC1-209ENST00000482889 SLC24A3Q9HC58 644 aa7.43□□□□□ -1.22
CLCC1-209ENST00000482889 PTGER2P43116 358 aa7.42□□□□□ -1.22
CLCC1-209ENST00000482889 JPH4Q96JJ6 628 aa7.42□□□□□ -1.22
CLCC1-209ENST00000482889 PBX2P40425 430 aa7.41□□□□□ -1.22
CLCC1-209ENST00000482889 FOSBP53539 338 aa7.41□□□□□ -1.22
CLCC1-209ENST00000482889 PPP4R3BQ5MIZ7 849 aa7.41□□□□□ -1.22
CLCC1-209ENST00000482889 PHF14O94880 888 aa7.38□□□□□ -1.23
CLCC1-209ENST00000482889 ZNF454Q8N9F8 522 aa7.38□□□□□ -1.23
CLCC1-209ENST00000482889 FBXW7Q969H0 707 aa7.37□□□□□ -1.23
CLCC1-209ENST00000482889 EPAS1Q99814 870 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms