RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 SCAPERQ9BY12 1400 aa27■■□□□ 1.91
NELFCD-208ENST00000482747 CDC42BPBQ9Y5S2 1711 aa26.99■■□□□ 1.91
NELFCD-208ENST00000482747 RICTORQ6R327 1708 aa26.97■■□□□ 1.91
NELFCD-208ENST00000482747 CDC42BPAQ5VT25 1732 aa26.94■■□□□ 1.9
NELFCD-208ENST00000482747 PREX2Q70Z35 1606 aa26.94■■□□□ 1.9
NELFCD-208ENST00000482747 ZNF777Q9ULD5 760 aaPredicted RBP26.94■■□□□ 1.9
NELFCD-208ENST00000482747 GPATCH8Q9UKJ3 1502 aaKnown RBP26.91■■□□□ 1.9
NELFCD-208ENST00000482747 TIAM1Q13009 1591 aa26.91■■□□□ 1.9
NELFCD-208ENST00000482747 AFAP1Q8N556 730 aa26.9■■□□□ 1.9
NELFCD-208ENST00000482747 POGZQ7Z3K3 1410 aa26.9■■□□□ 1.9
NELFCD-208ENST00000482747 EHBP1L1Q8N3D4 1523 aa26.89■■□□□ 1.9
NELFCD-208ENST00000482747 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.89
NELFCD-208ENST00000482747 KANK4Q5T7N3 995 aaPredicted RBP26.87■■□□□ 1.89
NELFCD-208ENST00000482747 YEATS2Q9ULM3 1422 aa26.87■■□□□ 1.89
NELFCD-208ENST00000482747 ARHGEF12Q9NZN5 1544 aa26.86■■□□□ 1.89
NELFCD-208ENST00000482747 CFDP1Q9UEE9 299 aaPredicted RBP26.85■■□□□ 1.89
NELFCD-208ENST00000482747 TRAPPC8Q9Y2L5 1435 aa26.82■■□□□ 1.88
NELFCD-208ENST00000482747 ZMYM4Q5VZL5 1548 aa26.82■■□□□ 1.88
NELFCD-208ENST00000482747 ARID4BQ4LE39 1312 aaPredicted RBP26.81■■□□□ 1.88
NELFCD-208ENST00000482747 ABCC1P33527 1531 aa26.81■■□□□ 1.88
NELFCD-208ENST00000482747 LRRC9Q6ZRR7 1453 aa26.81■■□□□ 1.88
NELFCD-208ENST00000482747 MYT1LQ9UL68 1186 aa26.81■■□□□ 1.88
NELFCD-208ENST00000482747 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
NELFCD-208ENST00000482747 SAMD9LQ8IVG5 1584 aa26.81■■□□□ 1.88
NELFCD-208ENST00000482747 NCOA2Q15596 1464 aa26.8■■□□□ 1.88
NELFCD-208ENST00000482747 ARHGEF40Q8TER5 1519 aa26.8■■□□□ 1.88
NELFCD-208ENST00000482747 HNRNPMP52272 730 aaKnown RBP eCLIP26.8■■□□□ 1.88
NELFCD-208ENST00000482747 ZFYVE16Q7Z3T8 1539 aa26.79■■□□□ 1.88
NELFCD-208ENST00000482747 ZNF518AQ6AHZ1 1483 aa26.79■■□□□ 1.88
NELFCD-208ENST00000482747 SUPT6HQ7KZ85 1726 aaKnown RBP26.77■■□□□ 1.88
NELFCD-208ENST00000482747 ITSN2Q9NZM3 1697 aa26.76■■□□□ 1.87
NELFCD-208ENST00000482747 SYCP2Q9BX26 1530 aa26.76■■□□□ 1.87
NELFCD-208ENST00000482747 APLP2Q06481 763 aa26.75■■□□□ 1.87
NELFCD-208ENST00000482747 MAGI2Q86UL8 1455 aa26.74■■□□□ 1.87
NELFCD-208ENST00000482747 SIGLEC1Q9BZZ2 1709 aa26.74■■□□□ 1.87
NELFCD-208ENST00000482747 KDM5CP41229 1560 aa26.73■■□□□ 1.87
NELFCD-208ENST00000482747 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
NELFCD-208ENST00000482747 MLECQ14165 292 aa26.69■■□□□ 1.86
NELFCD-208ENST00000482747 HECW2Q9P2P5 1572 aa26.68■■□□□ 1.86
NELFCD-208ENST00000482747 ATP10AO60312 1499 aa26.67■■□□□ 1.86
NELFCD-208ENST00000482747 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
NELFCD-208ENST00000482747 MLH3Q9UHC1 1453 aa26.64■■□□□ 1.86
NELFCD-208ENST00000482747 BCORL1Q5H9F3 1711 aa26.64■■□□□ 1.85
NELFCD-208ENST00000482747 ABCA6Q8N139 1617 aa26.63■■□□□ 1.85
NELFCD-208ENST00000482747 PLEKHH2Q8IVE3 1493 aa26.63■■□□□ 1.85
NELFCD-208ENST00000482747 DIP2CQ9Y2E4 1556 aa26.63■■□□□ 1.85
NELFCD-208ENST00000482747 SPAG9O60271 1321 aaKnown RBP26.62■■□□□ 1.85
NELFCD-208ENST00000482747 KIDINS220Q9ULH0 1771 aa26.62■■□□□ 1.85
NELFCD-208ENST00000482747 C9orf84Q5VXU9 1444 aa26.62■■□□□ 1.85
NELFCD-208ENST00000482747 ADAMTSL3P82987 1691 aa26.61■■□□□ 1.85
NELFCD-208ENST00000482747 CAMSAP2Q08AD1 1489 aa26.6■■□□□ 1.85
NELFCD-208ENST00000482747 MBD5Q9P267 1494 aa26.6■■□□□ 1.85
NELFCD-208ENST00000482747 MADDQ8WXG6 1647 aa26.58■■□□□ 1.85
NELFCD-208ENST00000482747 PLPPR3Q6T4P5 718 aa26.56■■□□□ 1.84
NELFCD-208ENST00000482747 MYOM3Q5VTT5 1437 aa26.55■■□□□ 1.84
NELFCD-208ENST00000482747 ATP7AQ04656 1500 aa26.54■■□□□ 1.84
NELFCD-208ENST00000482747 PTPRMP28827 1452 aa26.53■■□□□ 1.84
NELFCD-208ENST00000482747 PPARGC1BQ86YN6 1023 aaKnown RBP26.53■■□□□ 1.84
NELFCD-208ENST00000482747 INO80Q9ULG1 1556 aaPredicted RBP26.51■■□□□ 1.83
NELFCD-208ENST00000482747 RIMS1Q86UR5 1692 aaKnown RBP26.51■■□□□ 1.83
NELFCD-208ENST00000482747 CCDC141Q6ZP82 1450 aa26.48■■□□□ 1.83
NELFCD-208ENST00000482747 MIA2Q96PC5 1412 aa26.46■■□□□ 1.83
NELFCD-208ENST00000482747 REREQ9P2R6 1566 aa26.46■■□□□ 1.83
NELFCD-208ENST00000482747 FER1L4A9Z1Z3 1794 aa26.43■■□□□ 1.82
NELFCD-208ENST00000482747 A2MP01023 1474 aa26.42■■□□□ 1.82
NELFCD-208ENST00000482747 RSPH4AQ5TD94 716 aa26.42■■□□□ 1.82
NELFCD-208ENST00000482747 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
NELFCD-208ENST00000482747 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
NELFCD-208ENST00000482747 AGLP35573 1532 aa26.41■■□□□ 1.82
NELFCD-208ENST00000482747 ARHGEF5Q12774 1597 aa26.4■■□□□ 1.82
NELFCD-208ENST00000482747 CEBPAP49715 358 aaPredicted RBP26.4■■□□□ 1.82
NELFCD-208ENST00000482747 FGD6Q6ZV73 1430 aa26.4■■□□□ 1.82
NELFCD-208ENST00000482747 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.82
NELFCD-208ENST00000482747 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.82
NELFCD-208ENST00000482747 GGT6Q6P531 493 aa26.36■■□□□ 1.81
NELFCD-208ENST00000482747 PLXNC1O60486 1568 aa26.36■■□□□ 1.81
NELFCD-208ENST00000482747 ADGBQ8N7X0 1667 aa26.35■■□□□ 1.81
NELFCD-208ENST00000482747 DHX29Q7Z478 1369 aaKnown RBP26.32■■□□□ 1.8
NELFCD-208ENST00000482747 FAM50AQ14320 339 aaKnown RBP26.31■■□□□ 1.8
NELFCD-208ENST00000482747 ESF1Q9H501 851 aaKnown RBP26.31■■□□□ 1.8
NELFCD-208ENST00000482747 ABCC5O15440 1437 aa26.31■■□□□ 1.8
NELFCD-208ENST00000482747 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
NELFCD-208ENST00000482747 KIF3BO15066 747 aa26.29■■□□□ 1.8
NELFCD-208ENST00000482747 CHIC2Q9UKJ5 165 aa26.28■■□□□ 1.8
NELFCD-208ENST00000482747 DAPK1P53355 1430 aa26.26■■□□□ 1.79
NELFCD-208ENST00000482747 MAST1Q9Y2H9 1570 aa26.26■■□□□ 1.79
NELFCD-208ENST00000482747 RRP7BPQ9NSQ0 103 aa26.24■■□□□ 1.79
NELFCD-208ENST00000482747 DNMT1P26358 1616 aaKnown RBP26.23■■□□□ 1.79
NELFCD-208ENST00000482747 CROCC2H7BZ55 1655 aa26.22■■□□□ 1.79
NELFCD-208ENST00000482747 C3P01024 1663 aa26.21■■□□□ 1.79
NELFCD-208ENST00000482747 CLTCQ00610 1675 aaKnown RBP26.2■■□□□ 1.78
NELFCD-208ENST00000482747 LMTK3Q96Q04 1460 aa26.2■■□□□ 1.78
NELFCD-208ENST00000482747 HSPA2P54652 639 aa26.19■■□□□ 1.78
NELFCD-208ENST00000482747 ZMYM3Q14202 1370 aa26.18■■□□□ 1.78
NELFCD-208ENST00000482747 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
NELFCD-208ENST00000482747 CNTLNQ9NXG0 1405 aa26.17■■□□□ 1.78
NELFCD-208ENST00000482747 KIF15Q9NS87 1388 aa26.17■■□□□ 1.78
NELFCD-208ENST00000482747 ITGAEP38570 1179 aa26.13■■□□□ 1.77
NELFCD-208ENST00000482747 WASHC2CQ9Y4E1 1318 aa26.11■■□□□ 1.77
NELFCD-208ENST00000482747 PTPRKQ15262 1439 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms