RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 ST18O60284 1047 aa10.21□□□□□ -0.77
GTF3A-207ENST00000482655 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.77
GTF3A-207ENST00000482655 C2orf72A6NCS6 295 aa10.2□□□□□ -0.78
GTF3A-207ENST00000482655 RIMBP2O15034 1052 aa10.2□□□□□ -0.78
GTF3A-207ENST00000482655 POTEMA6NI47 508 aa10.18□□□□□ -0.78
GTF3A-207ENST00000482655 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
GTF3A-207ENST00000482655 KIF3CO14782 793 aa10.17□□□□□ -0.78
GTF3A-207ENST00000482655 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
GTF3A-207ENST00000482655 SPRYD3Q8NCJ5 442 aa10.17□□□□□ -0.78
GTF3A-207ENST00000482655 HOXB3P14651 431 aaPredicted RBP10.16□□□□□ -0.78
GTF3A-207ENST00000482655 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
GTF3A-207ENST00000482655 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
GTF3A-207ENST00000482655 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
GTF3A-207ENST00000482655 ZSWIM6Q9HCJ5 1215 aa10.12□□□□□ -0.79
GTF3A-207ENST00000482655 EMP3P54852 163 aa10.11□□□□□ -0.79
GTF3A-207ENST00000482655 MARVELD3Q96A59 401 aa10.11□□□□□ -0.79
GTF3A-207ENST00000482655 PDE4AP27815 886 aa10.09□□□□□ -0.79
GTF3A-207ENST00000482655 FOXK1P85037 733 aa10.09□□□□□ -0.79
GTF3A-207ENST00000482655 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
GTF3A-207ENST00000482655 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
GTF3A-207ENST00000482655 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
GTF3A-207ENST00000482655 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
GTF3A-207ENST00000482655 DSG2Q14126 1118 aa10.07□□□□□ -0.8
GTF3A-207ENST00000482655 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
GTF3A-207ENST00000482655 PPP1R15BQ5SWA1 713 aa10.05□□□□□ -0.8
GTF3A-207ENST00000482655 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
GTF3A-207ENST00000482655 SLC34A2O95436 690 aa10.04□□□□□ -0.8
GTF3A-207ENST00000482655 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
GTF3A-207ENST00000482655 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
GTF3A-207ENST00000482655 GPR153Q6NV75 609 aa10.03□□□□□ -0.8
GTF3A-207ENST00000482655 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
GTF3A-207ENST00000482655 FAM205CA6NFA0 338 aa10.02□□□□□ -0.81
GTF3A-207ENST00000482655 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
GTF3A-207ENST00000482655 PCDHGA4Q9Y5G9 962 aa10.01□□□□□ -0.81
GTF3A-207ENST00000482655 ERBB3P21860 1342 aa10.01□□□□□ -0.81
GTF3A-207ENST00000482655 TBC1D12O60347 775 aa9.99□□□□□ -0.81
GTF3A-207ENST00000482655 HS3ST6Q96QI5 342 aa9.99□□□□□ -0.81
GTF3A-207ENST00000482655 MFSD10Q14728 455 aa9.98□□□□□ -0.81
GTF3A-207ENST00000482655 CDAN1Q8IWY9 1227 aa9.98□□□□□ -0.81
GTF3A-207ENST00000482655 KHSRPQ92945 711 aaKnown RBP eCLIP9.98□□□□□ -0.81
GTF3A-207ENST00000482655 NUDT7P0C024 238 aa9.97□□□□□ -0.81
GTF3A-207ENST00000482655 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
GTF3A-207ENST00000482655 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
GTF3A-207ENST00000482655 VARS2Q5ST30 1063 aaKnown RBP9.95□□□□□ -0.82
GTF3A-207ENST00000482655 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
GTF3A-207ENST00000482655 OXER1Q8TDS5 423 aa9.93□□□□□ -0.82
GTF3A-207ENST00000482655 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
GTF3A-207ENST00000482655 POTEB3A0JP26 581 aa9.9□□□□□ -0.82
GTF3A-207ENST00000482655 PLCB2Q00722 1185 aa9.9□□□□□ -0.82
GTF3A-207ENST00000482655 POTEBQ6S5H4 581 aa9.9□□□□□ -0.82
GTF3A-207ENST00000482655 LHX6Q9UPM6 363 aa9.89□□□□□ -0.83
GTF3A-207ENST00000482655 PSDA5PKW4 1024 aaPredicted RBP9.88□□□□□ -0.83
GTF3A-207ENST00000482655 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
GTF3A-207ENST00000482655 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
GTF3A-207ENST00000482655 EMILIN3Q9NT22 766 aa9.86□□□□□ -0.83
GTF3A-207ENST00000482655 ZNF687Q8N1G0 1237 aa9.85□□□□□ -0.83
GTF3A-207ENST00000482655 KDM4FA0A1W2PPD8 638 aa9.84□□□□□ -0.83
GTF3A-207ENST00000482655 CAMK2BQ13554 666 aa9.84□□□□□ -0.83
GTF3A-207ENST00000482655 EVI5O60447 810 aa9.83□□□□□ -0.84
GTF3A-207ENST00000482655 E2F4Q16254 413 aa9.82□□□□□ -0.84
GTF3A-207ENST00000482655 PPP4R3BQ5MIZ7 849 aa9.82□□□□□ -0.84
GTF3A-207ENST00000482655 DPYSL4O14531 572 aa9.8□□□□□ -0.84
GTF3A-207ENST00000482655 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
GTF3A-207ENST00000482655 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
GTF3A-207ENST00000482655 PBX2P40425 430 aa9.79□□□□□ -0.84
GTF3A-207ENST00000482655 ZNF454Q8N9F8 522 aa9.78□□□□□ -0.84
GTF3A-207ENST00000482655 HAP1P54257 671 aaPredicted RBP9.77□□□□□ -0.85
GTF3A-207ENST00000482655 KCNH8Q96L42 1107 aa9.76□□□□□ -0.85
GTF3A-207ENST00000482655 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
GTF3A-207ENST00000482655 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
GTF3A-207ENST00000482655 ARHGAP33O14559 1287 aa9.73□□□□□ -0.85
GTF3A-207ENST00000482655 FOSBP53539 338 aa9.73□□□□□ -0.85
GTF3A-207ENST00000482655 AXIN2Q9Y2T1 843 aa9.73□□□□□ -0.85
GTF3A-207ENST00000482655 LSM11P83369 360 aaKnown RBP eCLIP9.72□□□□□ -0.85
GTF3A-207ENST00000482655 ANKRD13DQ6ZTN6 518 aa9.72□□□□□ -0.85
GTF3A-207ENST00000482655 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
GTF3A-207ENST00000482655 PDIA6Q15084 440 aa9.71□□□□□ -0.86
GTF3A-207ENST00000482655 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
GTF3A-207ENST00000482655 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
GTF3A-207ENST00000482655 KCNK17Q96T54 332 aa9.7□□□□□ -0.86
GTF3A-207ENST00000482655 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
GTF3A-207ENST00000482655 PHF14O94880 888 aa9.69□□□□□ -0.86
GTF3A-207ENST00000482655 P3H3Q8IVL6 736 aa9.69□□□□□ -0.86
GTF3A-207ENST00000482655 PTPREP23469 700 aa9.68□□□□□ -0.86
GTF3A-207ENST00000482655 POTEEQ6S8J3 1075 aa9.68□□□□□ -0.86
GTF3A-207ENST00000482655 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
GTF3A-207ENST00000482655 BCL2L12Q9HB09 334 aa9.68□□□□□ -0.86
GTF3A-207ENST00000482655 PSEN2P49810 448 aa9.67□□□□□ -0.86
GTF3A-207ENST00000482655 TYW1BQ6NUM6 668 aa9.67□□□□□ -0.86
GTF3A-207ENST00000482655 DDX12PQ92771 950 aa9.67□□□□□ -0.86
GTF3A-207ENST00000482655 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
GTF3A-207ENST00000482655 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
GTF3A-207ENST00000482655 EPAS1Q99814 870 aa9.66□□□□□ -0.86
GTF3A-207ENST00000482655 PTGER2P43116 358 aa9.65□□□□□ -0.86
GTF3A-207ENST00000482655 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
GTF3A-207ENST00000482655 ADAM33Q9BZ11 813 aa9.65□□□□□ -0.86
GTF3A-207ENST00000482655 MMRN1Q13201 1228 aa9.63□□□□□ -0.87
GTF3A-207ENST00000482655 NBR1Q14596 966 aa9.63□□□□□ -0.87
GTF3A-207ENST00000482655 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
GTF3A-207ENST00000482655 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms