RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 ITSN2Q9NZM3 1697 aa30.83■■■□□ 2.53
TRAPPC12-220ENST00000482645 CFDP1Q9UEE9 299 aaPredicted RBP30.81■■■□□ 2.52
TRAPPC12-220ENST00000482645 ZNF777Q9ULD5 760 aaPredicted RBP30.81■■■□□ 2.52
TRAPPC12-220ENST00000482645 ARAP3Q8WWN8 1544 aa30.81■■■□□ 2.52
TRAPPC12-220ENST00000482645 EFCAB2Q5VUJ9 269 aa30.8■■■□□ 2.52
TRAPPC12-220ENST00000482645 PHLDB1Q86UU1 1377 aa30.79■■■□□ 2.52
TRAPPC12-220ENST00000482645 CFAP74Q9C0B2 1584 aa30.79■■■□□ 2.52
TRAPPC12-220ENST00000482645 NEO1Q92859 1461 aa30.77■■■□□ 2.52
TRAPPC12-220ENST00000482645 MYOM3Q5VTT5 1437 aa30.75■■■□□ 2.51
TRAPPC12-220ENST00000482645 AKNAQ7Z591 1439 aa30.75■■■□□ 2.51
TRAPPC12-220ENST00000482645 ADGRL1O94910 1474 aa30.71■■■□□ 2.51
TRAPPC12-220ENST00000482645 SAMD9LQ8IVG5 1584 aa30.69■■■□□ 2.5
TRAPPC12-220ENST00000482645 KDM6BO15054 1643 aa30.69■■■□□ 2.5
TRAPPC12-220ENST00000482645 ZNF644Q9H582 1327 aaPredicted RBP30.68■■■□□ 2.5
TRAPPC12-220ENST00000482645 SCAPERQ9BY12 1400 aa30.66■■■□□ 2.5
TRAPPC12-220ENST00000482645 COL17A1Q9UMD9 1497 aaPredicted RBP30.64■■■□□ 2.5
TRAPPC12-220ENST00000482645 FGD6Q6ZV73 1430 aa30.64■■■□□ 2.5
TRAPPC12-220ENST00000482645 CAMSAP2Q08AD1 1489 aa30.64■■■□□ 2.49
TRAPPC12-220ENST00000482645 MIA2Q96PC5 1412 aa30.63■■■□□ 2.49
TRAPPC12-220ENST00000482645 ABCC1P33527 1531 aa30.63■■■□□ 2.49
TRAPPC12-220ENST00000482645 SYCP2Q9BX26 1530 aa30.62■■■□□ 2.49
TRAPPC12-220ENST00000482645 RAPGEF3O95398 923 aa30.61■■■□□ 2.49
TRAPPC12-220ENST00000482645 DENND4BO75064 1496 aaPredicted RBP30.6■■■□□ 2.49
TRAPPC12-220ENST00000482645 PTPN23Q9H3S7 1636 aa30.6■■■□□ 2.49
TRAPPC12-220ENST00000482645 HNRNPMP52272 730 aaKnown RBP eCLIP30.59■■■□□ 2.49
TRAPPC12-220ENST00000482645 PLEKHH2Q8IVE3 1493 aa30.58■■■□□ 2.49
TRAPPC12-220ENST00000482645 ARHGEF12Q9NZN5 1544 aa30.58■■■□□ 2.49
TRAPPC12-220ENST00000482645 FAM50AQ14320 339 aaKnown RBP30.55■■■□□ 2.48
TRAPPC12-220ENST00000482645 POGZQ7Z3K3 1410 aa30.54■■■□□ 2.48
TRAPPC12-220ENST00000482645 KIAA1107Q9UPP5 1409 aa30.54■■■□□ 2.48
TRAPPC12-220ENST00000482645 RICTORQ6R327 1708 aa30.53■■■□□ 2.48
TRAPPC12-220ENST00000482645 TRAPPC8Q9Y2L5 1435 aa30.53■■■□□ 2.48
TRAPPC12-220ENST00000482645 FRMPD1Q5SYB0 1578 aa30.52■■■□□ 2.48
TRAPPC12-220ENST00000482645 AFAP1Q8N556 730 aa30.52■■■□□ 2.48
TRAPPC12-220ENST00000482645 ZNF518AQ6AHZ1 1483 aa30.51■■■□□ 2.47
TRAPPC12-220ENST00000482645 TCOF1Q13428 1488 aaKnown RBP30.5■■■□□ 2.47
TRAPPC12-220ENST00000482645 MBD5Q9P267 1494 aa30.48■■■□□ 2.47
TRAPPC12-220ENST00000482645 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
TRAPPC12-220ENST00000482645 CCDC141Q6ZP82 1450 aa30.43■■■□□ 2.46
TRAPPC12-220ENST00000482645 KDM5CP41229 1560 aa30.42■■■□□ 2.46
TRAPPC12-220ENST00000482645 ARHGEF5Q12774 1597 aa30.42■■■□□ 2.46
TRAPPC12-220ENST00000482645 RRBP1Q9P2E9 1410 aaKnown RBP30.42■■■□□ 2.46
TRAPPC12-220ENST00000482645 SPAG9O60271 1321 aaKnown RBP30.39■■■□□ 2.45
TRAPPC12-220ENST00000482645 ZMYM4Q5VZL5 1548 aa30.39■■■□□ 2.45
TRAPPC12-220ENST00000482645 RSPH4AQ5TD94 716 aa30.38■■■□□ 2.45
TRAPPC12-220ENST00000482645 HECW2Q9P2P5 1572 aa30.38■■■□□ 2.45
TRAPPC12-220ENST00000482645 ITGAEP38570 1179 aa30.37■■■□□ 2.45
TRAPPC12-220ENST00000482645 DNMT1P26358 1616 aaKnown RBP30.36■■■□□ 2.45
TRAPPC12-220ENST00000482645 TSPY4P0CV99 314 aa30.36■■■□□ 2.45
TRAPPC12-220ENST00000482645 TSPY10P0CW01 314 aa30.36■■■□□ 2.45
TRAPPC12-220ENST00000482645 DAPK1P53355 1430 aa30.36■■■□□ 2.45
TRAPPC12-220ENST00000482645 ABCC5O15440 1437 aa30.34■■■□□ 2.45
TRAPPC12-220ENST00000482645 ZFYVE16Q7Z3T8 1539 aa30.32■■■□□ 2.44
TRAPPC12-220ENST00000482645 YEATS2Q9ULM3 1422 aa30.32■■■□□ 2.44
TRAPPC12-220ENST00000482645 CROCC2H7BZ55 1655 aa30.32■■■□□ 2.44
TRAPPC12-220ENST00000482645 MLH3Q9UHC1 1453 aa30.31■■■□□ 2.44
TRAPPC12-220ENST00000482645 ATP7AQ04656 1500 aa30.31■■■□□ 2.44
TRAPPC12-220ENST00000482645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.3■■■□□ 2.44
TRAPPC12-220ENST00000482645 MAGI2Q86UL8 1455 aa30.3■■■□□ 2.44
TRAPPC12-220ENST00000482645 KIDINS220Q9ULH0 1771 aa30.3■■■□□ 2.44
TRAPPC12-220ENST00000482645 C9orf84Q5VXU9 1444 aa30.3■■■□□ 2.44
TRAPPC12-220ENST00000482645 INO80Q9ULG1 1556 aaPredicted RBP30.29■■■□□ 2.44
TRAPPC12-220ENST00000482645 CHIC2Q9UKJ5 165 aa30.29■■■□□ 2.44
TRAPPC12-220ENST00000482645 ARHGEF40Q8TER5 1519 aa30.28■■■□□ 2.44
TRAPPC12-220ENST00000482645 ABCA6Q8N139 1617 aa30.25■■■□□ 2.43
TRAPPC12-220ENST00000482645 SHANK2Q9UPX8 1470 aa30.25■■■□□ 2.43
TRAPPC12-220ENST00000482645 RTEL1-TNFRSF6BF6WH68 1400 aa30.24■■■□□ 2.43
TRAPPC12-220ENST00000482645 MAST1Q9Y2H9 1570 aa30.23■■■□□ 2.43
TRAPPC12-220ENST00000482645 DIP2CQ9Y2E4 1556 aa30.23■■■□□ 2.43
TRAPPC12-220ENST00000482645 PTPRKQ15262 1439 aa30.21■■■□□ 2.43
TRAPPC12-220ENST00000482645 ATP10AO60312 1499 aa30.18■■■□□ 2.42
TRAPPC12-220ENST00000482645 TRIM26Q12899 539 aaPredicted RBP30.17■■■□□ 2.42
TRAPPC12-220ENST00000482645 ADGBQ8N7X0 1667 aa30.16■■■□□ 2.42
TRAPPC12-220ENST00000482645 RRP7BPQ9NSQ0 103 aa30.16■■■□□ 2.42
TRAPPC12-220ENST00000482645 ANKRD30AQ9BXX3 1397 aa30.14■■■□□ 2.42
TRAPPC12-220ENST00000482645 PLXNC1O60486 1568 aa30.13■■■□□ 2.41
TRAPPC12-220ENST00000482645 ARID4BQ4LE39 1312 aaPredicted RBP30.12■■■□□ 2.41
TRAPPC12-220ENST00000482645 KIF15Q9NS87 1388 aa30.12■■■□□ 2.41
TRAPPC12-220ENST00000482645 A2MP01023 1474 aa30.11■■■□□ 2.41
TRAPPC12-220ENST00000482645 NCOA1Q15788 1441 aa30.1■■■□□ 2.41
TRAPPC12-220ENST00000482645 ADGRL2O95490 1459 aa30.1■■■□□ 2.41
TRAPPC12-220ENST00000482645 SIGLEC1Q9BZZ2 1709 aa30.08■■■□□ 2.41
TRAPPC12-220ENST00000482645 REREQ9P2R6 1566 aa30.05■■■□□ 2.4
TRAPPC12-220ENST00000482645 ROCK1Q13464 1354 aa30.05■■■□□ 2.4
TRAPPC12-220ENST00000482645 DHX29Q7Z478 1369 aaKnown RBP30.05■■■□□ 2.4
TRAPPC12-220ENST00000482645 DUOX2Q9NRD8 1548 aa30.04■■■□□ 2.4
TRAPPC12-220ENST00000482645 MLECQ14165 292 aa30.01■■■□□ 2.39
TRAPPC12-220ENST00000482645 PCGF6Q9BYE7 350 aa29.99■■■□□ 2.39
TRAPPC12-220ENST00000482645 KIF3BO15066 747 aa29.97■■■□□ 2.39
TRAPPC12-220ENST00000482645 AGLP35573 1532 aa29.96■■■□□ 2.39
TRAPPC12-220ENST00000482645 ERBINQ96RT1 1412 aa29.95■■■□□ 2.39
TRAPPC12-220ENST00000482645 ANKRD50Q9ULJ7 1429 aa29.94■■■□□ 2.38
TRAPPC12-220ENST00000482645 GGT6Q6P531 493 aa29.92■■■□□ 2.38
TRAPPC12-220ENST00000482645 HFM1A2PYH4 1435 aa29.91■■■□□ 2.38
TRAPPC12-220ENST00000482645 NAIPQ13075 1403 aa29.91■■■□□ 2.38
TRAPPC12-220ENST00000482645 EIF2AK4Q9P2K8 1649 aaKnown RBP29.91■■■□□ 2.38
TRAPPC12-220ENST00000482645 GCC2Q8IWJ2 1684 aa29.9■■■□□ 2.38
TRAPPC12-220ENST00000482645 BCORL1Q5H9F3 1711 aa29.9■■■□□ 2.38
TRAPPC12-220ENST00000482645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.84■■■□□ 2.37
TRAPPC12-220ENST00000482645 RNF17Q9BXT8 1623 aaKnown RBP29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms