RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 TMCO4Q5TGY1 634 aa11.86□□□□□ -0.51
RBM39-233ENST00000482563 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
RBM39-233ENST00000482563 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
RBM39-233ENST00000482563 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
RBM39-233ENST00000482563 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
RBM39-233ENST00000482563 RBM25P49756 843 aaKnown RBP11.83□□□□□ -0.52
RBM39-233ENST00000482563 MFSD10Q14728 455 aa11.83□□□□□ -0.52
RBM39-233ENST00000482563 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
RBM39-233ENST00000482563 GPR37O15354 613 aa11.82□□□□□ -0.52
RBM39-233ENST00000482563 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
RBM39-233ENST00000482563 IRF5Q13568 498 aa11.8□□□□□ -0.52
RBM39-233ENST00000482563 RETREG2Q8NC44 543 aa11.8□□□□□ -0.52
RBM39-233ENST00000482563 CAMK2BQ13554 666 aa11.79□□□□□ -0.52
RBM39-233ENST00000482563 MCM6Q14566 821 aa11.79□□□□□ -0.52
RBM39-233ENST00000482563 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
RBM39-233ENST00000482563 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.52
RBM39-233ENST00000482563 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.52
RBM39-233ENST00000482563 GOPCQ9HD26 462 aa11.77□□□□□ -0.52
RBM39-233ENST00000482563 DSG3P32926 999 aa11.77□□□□□ -0.53
RBM39-233ENST00000482563 PROSER2Q86WR7 435 aaPredicted RBP11.75□□□□□ -0.53
RBM39-233ENST00000482563 SERPINA10Q9UK55 444 aa11.75□□□□□ -0.53
RBM39-233ENST00000482563 ZNF467Q7Z7K2 595 aaPredicted RBP11.74□□□□□ -0.53
RBM39-233ENST00000482563 POM121Q96HA1 1249 aa11.73□□□□□ -0.53
RBM39-233ENST00000482563 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
RBM39-233ENST00000482563 AMHR2Q16671 573 aa11.72□□□□□ -0.53
RBM39-233ENST00000482563 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
RBM39-233ENST00000482563 PDE4AP27815 886 aa11.71□□□□□ -0.54
RBM39-233ENST00000482563 CCDC102AQ96A19 550 aa11.71□□□□□ -0.54
RBM39-233ENST00000482563 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.54
RBM39-233ENST00000482563 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.54
RBM39-233ENST00000482563 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
RBM39-233ENST00000482563 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
RBM39-233ENST00000482563 MINK1Q8N4C8 1332 aaPredicted RBP11.68□□□□□ -0.54
RBM39-233ENST00000482563 PSEN1P49768 467 aa11.66□□□□□ -0.54
RBM39-233ENST00000482563 NLRP6P59044 892 aa11.66□□□□□ -0.54
RBM39-233ENST00000482563 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
RBM39-233ENST00000482563 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
RBM39-233ENST00000482563 E9PSI1 815 aa11.64□□□□□ -0.55
RBM39-233ENST00000482563 IRF6O14896 467 aa11.63□□□□□ -0.55
RBM39-233ENST00000482563 MAP2K5Q13163 448 aa11.63□□□□□ -0.55
RBM39-233ENST00000482563 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
RBM39-233ENST00000482563 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
RBM39-233ENST00000482563 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
RBM39-233ENST00000482563 MS4A1P11836 297 aa11.59□□□□□ -0.55
RBM39-233ENST00000482563 MYT1Q01538 1121 aa11.59□□□□□ -0.55
RBM39-233ENST00000482563 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
RBM39-233ENST00000482563 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
RBM39-233ENST00000482563 SOX12O15370 315 aa11.57□□□□□ -0.56
RBM39-233ENST00000482563 CDK11BP21127 795 aaKnown RBP11.57□□□□□ -0.56
RBM39-233ENST00000482563 CDK11AQ9UQ88 783 aaPredicted RBP11.57□□□□□ -0.56
RBM39-233ENST00000482563 EIF5BO60841 1220 aaKnown RBP11.56□□□□□ -0.56
RBM39-233ENST00000482563 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
RBM39-233ENST00000482563 OXER1Q8TDS5 423 aa11.56□□□□□ -0.56
RBM39-233ENST00000482563 MS4A4AQ96JQ5 239 aa11.55□□□□□ -0.56
RBM39-233ENST00000482563 DPYSL4O14531 572 aa11.54□□□□□ -0.56
RBM39-233ENST00000482563 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
RBM39-233ENST00000482563 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
RBM39-233ENST00000482563 FECHP22830 423 aa11.53□□□□□ -0.56
RBM39-233ENST00000482563 PDIA6Q15084 440 aa11.53□□□□□ -0.56
RBM39-233ENST00000482563 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
RBM39-233ENST00000482563 COG6Q9Y2V7 657 aa11.53□□□□□ -0.56
RBM39-233ENST00000482563 TTLL12Q14166 644 aaPredicted RBP11.52□□□□□ -0.56
RBM39-233ENST00000482563 REPIN1Q9BWE0 567 aaKnown RBP11.52□□□□□ -0.56
RBM39-233ENST00000482563 CABP2Q9NPB3 220 aa11.52□□□□□ -0.56
RBM39-233ENST00000482563 EMILIN3Q9NT22 766 aa11.52□□□□□ -0.56
RBM39-233ENST00000482563 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
RBM39-233ENST00000482563 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
RBM39-233ENST00000482563 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
RBM39-233ENST00000482563 PPP1R15AO75807 674 aaPredicted RBP11.48□□□□□ -0.57
RBM39-233ENST00000482563 SPDYE16A6NNV3 312 aaPredicted RBP11.47□□□□□ -0.57
RBM39-233ENST00000482563 USP35Q9P2H5 1018 aa11.47□□□□□ -0.57
RBM39-233ENST00000482563 CLEC11AQ9Y240 323 aa11.47□□□□□ -0.57
RBM39-233ENST00000482563 GNPATO15228 680 aa11.46□□□□□ -0.57
RBM39-233ENST00000482563 NUTM2FA1L443 756 aa11.46□□□□□ -0.58
RBM39-233ENST00000482563 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.58
RBM39-233ENST00000482563 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.58
RBM39-233ENST00000482563 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
RBM39-233ENST00000482563 PROCA1Q8NCQ7 364 aaPredicted RBP11.45□□□□□ -0.58
RBM39-233ENST00000482563 KCNA1Q09470 495 aa11.42□□□□□ -0.58
RBM39-233ENST00000482563 SKIV2LQ15477 1246 aaKnown RBP11.42□□□□□ -0.58
RBM39-233ENST00000482563 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
RBM39-233ENST00000482563 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
RBM39-233ENST00000482563 BRD1O95696 1058 aa11.4□□□□□ -0.58
RBM39-233ENST00000482563 UNCXA6NJT0 531 aa11.39□□□□□ -0.59
RBM39-233ENST00000482563 PATL2C9JE40 543 aaKnown RBP11.39□□□□□ -0.59
RBM39-233ENST00000482563 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
RBM39-233ENST00000482563 HIC1Q14526 733 aa11.38□□□□□ -0.59
RBM39-233ENST00000482563 TMUB1Q9BVT8 246 aa11.38□□□□□ -0.59
RBM39-233ENST00000482563 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
RBM39-233ENST00000482563 CHMP4AQ9BY43 222 aa11.38□□□□□ -0.59
RBM39-233ENST00000482563 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
RBM39-233ENST00000482563 GRXCR2A6NFK2 248 aa11.36□□□□□ -0.59
RBM39-233ENST00000482563 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
RBM39-233ENST00000482563 IGSF5Q9NSI5 407 aa11.36□□□□□ -0.59
RBM39-233ENST00000482563 PDE4CQ08493 712 aa11.35□□□□□ -0.59
RBM39-233ENST00000482563 CCDC27Q2M243 656 aa11.35□□□□□ -0.59
RBM39-233ENST00000482563 CARNS1A5YM72 827 aa11.35□□□□□ -0.59
RBM39-233ENST00000482563 OSBPP22059 807 aa11.35□□□□□ -0.59
RBM39-233ENST00000482563 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
RBM39-233ENST00000482563 RSPH4AQ5TD94 716 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms