RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 PREX2Q70Z35 1606 aa25.26■■□□□ 1.63
COL16A1-212ENST00000482478 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
COL16A1-212ENST00000482478 SCAPERQ9BY12 1400 aa25.22■■□□□ 1.63
COL16A1-212ENST00000482478 EFCAB2Q5VUJ9 269 aa25.19■■□□□ 1.62
COL16A1-212ENST00000482478 CDC42BPBQ9Y5S2 1711 aa25.18■■□□□ 1.62
COL16A1-212ENST00000482478 CDC42BPAQ5VT25 1732 aa25.16■■□□□ 1.62
COL16A1-212ENST00000482478 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
COL16A1-212ENST00000482478 MAGI2Q86UL8 1455 aa25.15■■□□□ 1.62
COL16A1-212ENST00000482478 ARID4BQ4LE39 1312 aaPredicted RBP25.15■■□□□ 1.62
COL16A1-212ENST00000482478 YEATS2Q9ULM3 1422 aa25.15■■□□□ 1.62
COL16A1-212ENST00000482478 ABCC1P33527 1531 aa25.15■■□□□ 1.62
COL16A1-212ENST00000482478 EHBP1L1Q8N3D4 1523 aa25.15■■□□□ 1.62
COL16A1-212ENST00000482478 MTUS2Q5JR59 1369 aa25.14■■□□□ 1.61
COL16A1-212ENST00000482478 BCORL1Q5H9F3 1711 aa25.14■■□□□ 1.61
COL16A1-212ENST00000482478 ITSN2Q9NZM3 1697 aa25.12■■□□□ 1.61
COL16A1-212ENST00000482478 ADAMTSL3P82987 1691 aa25.11■■□□□ 1.61
COL16A1-212ENST00000482478 KDM5CP41229 1560 aa25.11■■□□□ 1.61
COL16A1-212ENST00000482478 HECW2Q9P2P5 1572 aa25.11■■□□□ 1.61
COL16A1-212ENST00000482478 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
COL16A1-212ENST00000482478 C9orf84Q5VXU9 1444 aa25.06■■□□□ 1.6
COL16A1-212ENST00000482478 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
COL16A1-212ENST00000482478 SIGLEC1Q9BZZ2 1709 aa25.06■■□□□ 1.6
COL16A1-212ENST00000482478 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
COL16A1-212ENST00000482478 VPS8Q8N3P4 1428 aa25.04■■□□□ 1.6
COL16A1-212ENST00000482478 SYCP2Q9BX26 1530 aa25.04■■□□□ 1.6
COL16A1-212ENST00000482478 CCNB3Q8WWL7 1395 aa25.04■■□□□ 1.6
COL16A1-212ENST00000482478 RIMS1Q86UR5 1692 aaKnown RBP25.04■■□□□ 1.6
COL16A1-212ENST00000482478 GPATCH8Q9UKJ3 1502 aaKnown RBP25.03■■□□□ 1.6
COL16A1-212ENST00000482478 MYT1LQ9UL68 1186 aa25.03■■□□□ 1.6
COL16A1-212ENST00000482478 PTPRMP28827 1452 aa25.02■■□□□ 1.6
COL16A1-212ENST00000482478 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
COL16A1-212ENST00000482478 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
COL16A1-212ENST00000482478 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
COL16A1-212ENST00000482478 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
COL16A1-212ENST00000482478 ZNF777Q9ULD5 760 aaPredicted RBP25■■□□□ 1.59
COL16A1-212ENST00000482478 ATP10AO60312 1499 aa25■■□□□ 1.59
COL16A1-212ENST00000482478 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
COL16A1-212ENST00000482478 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
COL16A1-212ENST00000482478 SUPT6HQ7KZ85 1726 aaKnown RBP24.98■■□□□ 1.59
COL16A1-212ENST00000482478 FER1L4A9Z1Z3 1794 aa24.97■■□□□ 1.59
COL16A1-212ENST00000482478 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
COL16A1-212ENST00000482478 MLH3Q9UHC1 1453 aa24.95■■□□□ 1.58
COL16A1-212ENST00000482478 CFDP1Q9UEE9 299 aaPredicted RBP24.94■■□□□ 1.58
COL16A1-212ENST00000482478 MLECQ14165 292 aa24.93■■□□□ 1.58
COL16A1-212ENST00000482478 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
COL16A1-212ENST00000482478 NCOA2Q15596 1464 aa24.91■■□□□ 1.58
COL16A1-212ENST00000482478 KIDINS220Q9ULH0 1771 aa24.9■■□□□ 1.58
COL16A1-212ENST00000482478 KIAA1107Q9UPP5 1409 aa24.87■■□□□ 1.57
COL16A1-212ENST00000482478 ATP7AQ04656 1500 aa24.87■■□□□ 1.57
COL16A1-212ENST00000482478 INO80Q9ULG1 1556 aaPredicted RBP24.87■■□□□ 1.57
COL16A1-212ENST00000482478 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
COL16A1-212ENST00000482478 LRRC9Q6ZRR7 1453 aa24.85■■□□□ 1.57
COL16A1-212ENST00000482478 SPAG9O60271 1321 aaKnown RBP24.83■■□□□ 1.56
COL16A1-212ENST00000482478 CAMSAP2Q08AD1 1489 aa24.83■■□□□ 1.56
COL16A1-212ENST00000482478 HNRNPMP52272 730 aaKnown RBP eCLIP24.82■■□□□ 1.56
COL16A1-212ENST00000482478 AGLP35573 1532 aa24.81■■□□□ 1.56
COL16A1-212ENST00000482478 MAP3K1Q13233 1512 aa24.8■■□□□ 1.56
COL16A1-212ENST00000482478 ZNF644Q9H582 1327 aaPredicted RBP24.76■■□□□ 1.55
COL16A1-212ENST00000482478 CCDC141Q6ZP82 1450 aa24.76■■□□□ 1.55
COL16A1-212ENST00000482478 LMTK3Q96Q04 1460 aa24.76■■□□□ 1.55
COL16A1-212ENST00000482478 PLXNC1O60486 1568 aa24.75■■□□□ 1.55
COL16A1-212ENST00000482478 ADGBQ8N7X0 1667 aa24.73■■□□□ 1.55
COL16A1-212ENST00000482478 MBD5Q9P267 1494 aa24.73■■□□□ 1.55
COL16A1-212ENST00000482478 A2MP01023 1474 aa24.72■■□□□ 1.55
COL16A1-212ENST00000482478 APLP2Q06481 763 aa24.71■■□□□ 1.55
COL16A1-212ENST00000482478 ESF1Q9H501 851 aaKnown RBP24.7■■□□□ 1.54
COL16A1-212ENST00000482478 PREX1Q8TCU6 1659 aa24.68■■□□□ 1.54
COL16A1-212ENST00000482478 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
COL16A1-212ENST00000482478 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
COL16A1-212ENST00000482478 MYOM3Q5VTT5 1437 aa24.67■■□□□ 1.54
COL16A1-212ENST00000482478 C3P01024 1663 aa24.66■■□□□ 1.54
COL16A1-212ENST00000482478 CNTLNQ9NXG0 1405 aa24.65■■□□□ 1.54
COL16A1-212ENST00000482478 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
COL16A1-212ENST00000482478 CEBPAP49715 358 aaPredicted RBP24.61■■□□□ 1.53
COL16A1-212ENST00000482478 MROH2AA6NES4 1674 aa24.61■■□□□ 1.53
COL16A1-212ENST00000482478 MIA2Q96PC5 1412 aa24.6■■□□□ 1.53
COL16A1-212ENST00000482478 CLTCQ00610 1675 aaKnown RBP24.59■■□□□ 1.53
COL16A1-212ENST00000482478 UHRF1BP1Q6BDS2 1440 aa24.59■■□□□ 1.53
COL16A1-212ENST00000482478 HSPA2P54652 639 aa24.57■■□□□ 1.52
COL16A1-212ENST00000482478 MAST1Q9Y2H9 1570 aa24.55■■□□□ 1.52
COL16A1-212ENST00000482478 PTPN23Q9H3S7 1636 aa24.55■■□□□ 1.52
COL16A1-212ENST00000482478 RSPH4AQ5TD94 716 aa24.55■■□□□ 1.52
COL16A1-212ENST00000482478 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
COL16A1-212ENST00000482478 GGT6Q6P531 493 aa24.52■■□□□ 1.52
COL16A1-212ENST00000482478 DHX29Q7Z478 1369 aaKnown RBP24.52■■□□□ 1.52
COL16A1-212ENST00000482478 TSPY4P0CV99 314 aa24.51■■□□□ 1.51
COL16A1-212ENST00000482478 TSPY10P0CW01 314 aa24.51■■□□□ 1.51
COL16A1-212ENST00000482478 FGD6Q6ZV73 1430 aa24.49■■□□□ 1.51
COL16A1-212ENST00000482478 KDM5DQ9BY66 1539 aa24.48■■□□□ 1.51
COL16A1-212ENST00000482478 SHANK2Q9UPX8 1470 aa24.47■■□□□ 1.51
COL16A1-212ENST00000482478 FAM135AQ9P2D6 1515 aa24.46■■□□□ 1.51
COL16A1-212ENST00000482478 NPATQ14207 1427 aa24.46■■□□□ 1.51
COL16A1-212ENST00000482478 MYO3AQ8NEV4 1616 aa24.46■■□□□ 1.51
COL16A1-212ENST00000482478 ZMYM3Q14202 1370 aa24.45■■□□□ 1.5
COL16A1-212ENST00000482478 DNMT1P26358 1616 aaKnown RBP24.44■■□□□ 1.5
COL16A1-212ENST00000482478 EIF2AK4Q9P2K8 1649 aaKnown RBP24.44■■□□□ 1.5
COL16A1-212ENST00000482478 KIF3BO15066 747 aa24.44■■□□□ 1.5
COL16A1-212ENST00000482478 TCOF1Q13428 1488 aaKnown RBP24.44■■□□□ 1.5
COL16A1-212ENST00000482478 RNF17Q9BXT8 1623 aaKnown RBP24.43■■□□□ 1.5
COL16A1-212ENST00000482478 DAPK1P53355 1430 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms