RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 POGZQ7Z3K3 1410 aa31.83■■■□□ 2.69
MSH5-215ENST00000482280 ARHGEF40Q8TER5 1519 aa31.82■■■□□ 2.68
MSH5-215ENST00000482280 MAGI2Q86UL8 1455 aa31.81■■■□□ 2.68
MSH5-215ENST00000482280 ZMYM4Q5VZL5 1548 aa31.8■■■□□ 2.68
MSH5-215ENST00000482280 ZFYVE16Q7Z3T8 1539 aa31.8■■■□□ 2.68
MSH5-215ENST00000482280 MYT1LQ9UL68 1186 aa31.79■■■□□ 2.68
MSH5-215ENST00000482280 MTUS2Q5JR59 1369 aa31.75■■■□□ 2.67
MSH5-215ENST00000482280 ZNF518AQ6AHZ1 1483 aa31.74■■■□□ 2.67
MSH5-215ENST00000482280 PREX2Q70Z35 1606 aa31.71■■■□□ 2.67
MSH5-215ENST00000482280 YEATS2Q9ULM3 1422 aa31.7■■■□□ 2.67
MSH5-215ENST00000482280 LOC105371045A0A1W2PR82 267 aa31.7■■■□□ 2.67
MSH5-215ENST00000482280 CDC42BPBQ9Y5S2 1711 aa31.67■■■□□ 2.66
MSH5-215ENST00000482280 ZNF777Q9ULD5 760 aaPredicted RBP31.67■■■□□ 2.66
MSH5-215ENST00000482280 BCORL1Q5H9F3 1711 aa31.66■■■□□ 2.66
MSH5-215ENST00000482280 AFAP1Q8N556 730 aa31.66■■■□□ 2.66
MSH5-215ENST00000482280 ADAMTSL3P82987 1691 aa31.65■■■□□ 2.66
MSH5-215ENST00000482280 CCNB3Q8WWL7 1395 aa31.65■■■□□ 2.66
MSH5-215ENST00000482280 ATP10AO60312 1499 aa31.63■■■□□ 2.65
MSH5-215ENST00000482280 PTPRMP28827 1452 aa31.61■■■□□ 2.65
MSH5-215ENST00000482280 C9orf84Q5VXU9 1444 aa31.61■■■□□ 2.65
MSH5-215ENST00000482280 CFDP1Q9UEE9 299 aaPredicted RBP31.61■■■□□ 2.65
MSH5-215ENST00000482280 CDC42BPAQ5VT25 1732 aa31.6■■■□□ 2.65
MSH5-215ENST00000482280 ABCC1P33527 1531 aa31.59■■■□□ 2.65
MSH5-215ENST00000482280 MLECQ14165 292 aa31.59■■■□□ 2.65
MSH5-215ENST00000482280 KDM5CP41229 1560 aa31.58■■■□□ 2.65
MSH5-215ENST00000482280 MADDQ8WXG6 1647 aa31.57■■■□□ 2.64
MSH5-215ENST00000482280 EHBP1L1Q8N3D4 1523 aa31.57■■■□□ 2.64
MSH5-215ENST00000482280 GPATCH8Q9UKJ3 1502 aaKnown RBP31.57■■■□□ 2.64
MSH5-215ENST00000482280 HECW2Q9P2P5 1572 aa31.56■■■□□ 2.64
MSH5-215ENST00000482280 TRAPPC8Q9Y2L5 1435 aa31.52■■■□□ 2.64
MSH5-215ENST00000482280 ITSN2Q9NZM3 1697 aa31.52■■■□□ 2.64
MSH5-215ENST00000482280 PLEKHH2Q8IVE3 1493 aa31.52■■■□□ 2.64
MSH5-215ENST00000482280 MLH3Q9UHC1 1453 aa31.52■■■□□ 2.64
MSH5-215ENST00000482280 VPS8Q8N3P4 1428 aa31.5■■■□□ 2.63
MSH5-215ENST00000482280 ARHGEF12Q9NZN5 1544 aa31.49■■■□□ 2.63
MSH5-215ENST00000482280 PLPPR3Q6T4P5 718 aa31.49■■■□□ 2.63
MSH5-215ENST00000482280 RIMS1Q86UR5 1692 aaKnown RBP31.48■■■□□ 2.63
MSH5-215ENST00000482280 SAMD9LQ8IVG5 1584 aa31.47■■■□□ 2.63
MSH5-215ENST00000482280 SYCP2Q9BX26 1530 aa31.46■■■□□ 2.63
MSH5-215ENST00000482280 HNRNPMP52272 730 aaKnown RBP eCLIP31.46■■■□□ 2.63
MSH5-215ENST00000482280 SPAG9O60271 1321 aaKnown RBP31.45■■■□□ 2.62
MSH5-215ENST00000482280 KIAA1107Q9UPP5 1409 aa31.44■■■□□ 2.62
MSH5-215ENST00000482280 DIP2CQ9Y2E4 1556 aa31.43■■■□□ 2.62
MSH5-215ENST00000482280 SIGLEC1Q9BZZ2 1709 aa31.43■■■□□ 2.62
MSH5-215ENST00000482280 ESF1Q9H501 851 aaKnown RBP31.41■■■□□ 2.62
MSH5-215ENST00000482280 TIAM1Q13009 1591 aa31.41■■■□□ 2.62
MSH5-215ENST00000482280 ABCA6Q8N139 1617 aa31.39■■■□□ 2.62
MSH5-215ENST00000482280 SUPT6HQ7KZ85 1726 aaKnown RBP31.39■■■□□ 2.62
MSH5-215ENST00000482280 FER1L4A9Z1Z3 1794 aa31.39■■■□□ 2.62
MSH5-215ENST00000482280 REREQ9P2R6 1566 aa31.39■■■□□ 2.61
MSH5-215ENST00000482280 APLP2Q06481 763 aa31.37■■■□□ 2.61
MSH5-215ENST00000482280 NCOA2Q15596 1464 aa31.35■■■□□ 2.61
MSH5-215ENST00000482280 KIDINS220Q9ULH0 1771 aa31.33■■■□□ 2.61
MSH5-215ENST00000482280 ZNF644Q9H582 1327 aaPredicted RBP31.3■■■□□ 2.6
MSH5-215ENST00000482280 AGLP35573 1532 aa31.3■■■□□ 2.6
MSH5-215ENST00000482280 LRRC9Q6ZRR7 1453 aa31.3■■■□□ 2.6
MSH5-215ENST00000482280 ATP7AQ04656 1500 aa31.29■■■□□ 2.6
MSH5-215ENST00000482280 MAP3K1Q13233 1512 aa31.27■■■□□ 2.6
MSH5-215ENST00000482280 RSPH4AQ5TD94 716 aa31.23■■■□□ 2.59
MSH5-215ENST00000482280 INO80Q9ULG1 1556 aaPredicted RBP31.22■■■□□ 2.59
MSH5-215ENST00000482280 LMTK3Q96Q04 1460 aa31.22■■■□□ 2.59
MSH5-215ENST00000482280 CAMSAP2Q08AD1 1489 aa31.21■■■□□ 2.59
MSH5-215ENST00000482280 CEBPAP49715 358 aaPredicted RBP31.2■■■□□ 2.59
MSH5-215ENST00000482280 A2MP01023 1474 aa31.2■■■□□ 2.58
MSH5-215ENST00000482280 MBD5Q9P267 1494 aa31.2■■■□□ 2.58
MSH5-215ENST00000482280 KANK4Q5T7N3 995 aaPredicted RBP31.18■■■□□ 2.58
MSH5-215ENST00000482280 CCDC141Q6ZP82 1450 aa31.18■■■□□ 2.58
MSH5-215ENST00000482280 CNTLNQ9NXG0 1405 aa31.17■■■□□ 2.58
MSH5-215ENST00000482280 RTEL1-TNFRSF6BF6WH68 1400 aa31.16■■■□□ 2.58
MSH5-215ENST00000482280 TSPY4P0CV99 314 aa31.15■■■□□ 2.58
MSH5-215ENST00000482280 TSPY10P0CW01 314 aa31.15■■■□□ 2.58
MSH5-215ENST00000482280 HSPA2P54652 639 aa31.12■■■□□ 2.57
MSH5-215ENST00000482280 GGT6Q6P531 493 aa31.11■■■□□ 2.57
MSH5-215ENST00000482280 ADGBQ8N7X0 1667 aa31.11■■■□□ 2.57
MSH5-215ENST00000482280 MYOM3Q5VTT5 1437 aa31.08■■■□□ 2.57
MSH5-215ENST00000482280 PLXNC1O60486 1568 aa31.08■■■□□ 2.57
MSH5-215ENST00000482280 UHRF1BP1Q6BDS2 1440 aa31.07■■■□□ 2.57
MSH5-215ENST00000482280 MIA2Q96PC5 1412 aa31.07■■■□□ 2.56
MSH5-215ENST00000482280 PREX1Q8TCU6 1659 aa31.06■■■□□ 2.56
MSH5-215ENST00000482280 ARHGEF5Q12774 1597 aa31.05■■■□□ 2.56
MSH5-215ENST00000482280 PPP6R1Q9UPN7 881 aa31.04■■■□□ 2.56
MSH5-215ENST00000482280 DHX29Q7Z478 1369 aaKnown RBP31.04■■■□□ 2.56
MSH5-215ENST00000482280 C3P01024 1663 aa31.03■■■□□ 2.56
MSH5-215ENST00000482280 ZMYM3Q14202 1370 aa31■■■□□ 2.55
MSH5-215ENST00000482280 KIF3BO15066 747 aa30.98■■■□□ 2.55
MSH5-215ENST00000482280 MROH2AA6NES4 1674 aa30.97■■■□□ 2.55
MSH5-215ENST00000482280 SETD1BQ9UPS6 1966 aaKnown RBP30.95■■■□□ 2.54
MSH5-215ENST00000482280 NPATQ14207 1427 aa30.94■■■□□ 2.54
MSH5-215ENST00000482280 CLTCQ00610 1675 aaKnown RBP30.93■■■□□ 2.54
MSH5-215ENST00000482280 DMRT2Q9Y5R5 561 aa30.9■■■□□ 2.54
MSH5-215ENST00000482280 MAST1Q9Y2H9 1570 aa30.88■■■□□ 2.53
MSH5-215ENST00000482280 ILDR1Q86SU0 546 aaPredicted RBP30.87■■■□□ 2.53
MSH5-215ENST00000482280 WASHC2CQ9Y4E1 1318 aa30.87■■■□□ 2.53
MSH5-215ENST00000482280 PTPN23Q9H3S7 1636 aa30.85■■■□□ 2.53
MSH5-215ENST00000482280 FGD6Q6ZV73 1430 aa30.83■■■□□ 2.53
MSH5-215ENST00000482280 FAM135AQ9P2D6 1515 aa30.82■■■□□ 2.52
MSH5-215ENST00000482280 KDM5DQ9BY66 1539 aa30.81■■■□□ 2.52
MSH5-215ENST00000482280 PTPRKQ15262 1439 aa30.8■■■□□ 2.52
MSH5-215ENST00000482280 SHANK2Q9UPX8 1470 aa30.77■■■□□ 2.52
MSH5-215ENST00000482280 ABCC5O15440 1437 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms