RNA–Protein interactions for RNA: ENST00000482232.1

GTF2I-208, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-208ENST00000482232 KIF3CO14782 793 aa14.72□□□□□ -0.05
GTF2I-208ENST00000482232 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
GTF2I-208ENST00000482232 CRISPLD2Q9H0B8 497 aa14.7□□□□□ -0.06
GTF2I-208ENST00000482232 NCKAP5LQ9HCH0 1330 aa14.67□□□□□ -0.06
GTF2I-208ENST00000482232 SLAIN1Q8ND83 568 aa14.66□□□□□ -0.06
GTF2I-208ENST00000482232 GPHNQ9NQX3 736 aaPredicted RBP14.66□□□□□ -0.06
GTF2I-208ENST00000482232 C2orf72A6NCS6 295 aa14.64□□□□□ -0.07
GTF2I-208ENST00000482232 PDE4AP27815 886 aa14.62□□□□□ -0.07
GTF2I-208ENST00000482232 TMC2Q8TDI7 906 aa14.61□□□□□ -0.07
GTF2I-208ENST00000482232 MFSD10Q14728 455 aa14.6□□□□□ -0.07
GTF2I-208ENST00000482232 HAP1P54257 671 aaPredicted RBP14.59□□□□□ -0.07
GTF2I-208ENST00000482232 FOXK1P85037 733 aa14.59□□□□□ -0.07
GTF2I-208ENST00000482232 DSG2Q14126 1118 aa14.55□□□□□ -0.08
GTF2I-208ENST00000482232 LARP6Q9BRS8 491 aaKnown RBP14.54□□□□□ -0.08
GTF2I-208ENST00000482232 DDX27Q96GQ7 796 aaKnown RBP14.51□□□□□ -0.09
GTF2I-208ENST00000482232 PPP1R15BQ5SWA1 713 aa14.5□□□□□ -0.09
GTF2I-208ENST00000482232 HOXB3P14651 431 aaPredicted RBP14.48□□□□□ -0.09
GTF2I-208ENST00000482232 PLPP6Q8IY26 295 aa14.48□□□□□ -0.09
GTF2I-208ENST00000482232 VSIG10Q8N0Z9 540 aa14.46□□□□□ -0.09
GTF2I-208ENST00000482232 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
GTF2I-208ENST00000482232 SLC34A2O95436 690 aa14.45□□□□□ -0.1
GTF2I-208ENST00000482232 SNPHO15079 494 aa14.44□□□□□ -0.1
GTF2I-208ENST00000482232 CAMK2BQ13554 666 aa14.44□□□□□ -0.1
GTF2I-208ENST00000482232 DOK7Q18PE1 504 aa14.4□□□□□ -0.1
GTF2I-208ENST00000482232 WDR70Q9NW82 654 aa14.39□□□□□ -0.11
GTF2I-208ENST00000482232 PTCD2Q8WV60 388 aaKnown RBP14.37□□□□□ -0.11
GTF2I-208ENST00000482232 ZSWIM6Q9HCJ5 1215 aa14.36□□□□□ -0.11
GTF2I-208ENST00000482232 SLC24A1O60721 1099 aa14.35□□□□□ -0.11
GTF2I-208ENST00000482232 OXER1Q8TDS5 423 aa14.35□□□□□ -0.11
GTF2I-208ENST00000482232 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
GTF2I-208ENST00000482232 E2F4Q16254 413 aa14.34□□□□□ -0.11
GTF2I-208ENST00000482232 LCE2DQ5TA82 110 aaPredicted RBP14.33□□□□□ -0.12
GTF2I-208ENST00000482232 GPR153Q6NV75 609 aa14.32□□□□□ -0.12
GTF2I-208ENST00000482232 ARIH1Q9Y4X5 557 aaPredicted RBP14.32□□□□□ -0.12
GTF2I-208ENST00000482232 RIMBP2O15034 1052 aa14.3□□□□□ -0.12
GTF2I-208ENST00000482232 ST18O60284 1047 aa14.3□□□□□ -0.12
GTF2I-208ENST00000482232 PCDHGA4Q9Y5G9 962 aa14.29□□□□□ -0.12
GTF2I-208ENST00000482232 ZNF710Q8N1W2 664 aa14.28□□□□□ -0.12
GTF2I-208ENST00000482232 KDM4FA0A1W2PPD8 638 aa14.27□□□□□ -0.13
GTF2I-208ENST00000482232 HOXB1P14653 301 aaPredicted RBP14.27□□□□□ -0.13
GTF2I-208ENST00000482232 KCNV2Q8TDN2 545 aa14.26□□□□□ -0.13
GTF2I-208ENST00000482232 FAM163AQ96GL9 167 aaPredicted RBP14.26□□□□□ -0.13
GTF2I-208ENST00000482232 ARSIQ5FYB1 569 aa14.24□□□□□ -0.13
GTF2I-208ENST00000482232 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
GTF2I-208ENST00000482232 TBC1D12O60347 775 aa14.22□□□□□ -0.13
GTF2I-208ENST00000482232 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
GTF2I-208ENST00000482232 ARHGEF1Q92888 912 aaKnown RBP14.2□□□□□ -0.14
GTF2I-208ENST00000482232 KHSRPQ92945 711 aaKnown RBP eCLIP14.2□□□□□ -0.14
GTF2I-208ENST00000482232 DPYSL4O14531 572 aa14.18□□□□□ -0.14
GTF2I-208ENST00000482232 MAP3K9P80192 1104 aa14.18□□□□□ -0.14
GTF2I-208ENST00000482232 ANO8Q9HCE9 1232 aaPredicted RBP14.17□□□□□ -0.14
GTF2I-208ENST00000482232 NUDT7P0C024 238 aa14.15□□□□□ -0.14
GTF2I-208ENST00000482232 PDIA6Q15084 440 aa14.15□□□□□ -0.14
GTF2I-208ENST00000482232 EVI5O60447 810 aa14.13□□□□□ -0.15
GTF2I-208ENST00000482232 SPDYE16A6NNV3 312 aaPredicted RBP14.12□□□□□ -0.15
GTF2I-208ENST00000482232 MARVELD3Q96A59 401 aa14.11□□□□□ -0.15
GTF2I-208ENST00000482232 EMP3P54852 163 aa14.08□□□□□ -0.16
GTF2I-208ENST00000482232 LHX6Q9UPM6 363 aa14.08□□□□□ -0.16
GTF2I-208ENST00000482232 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
GTF2I-208ENST00000482232 PTGER2P43116 358 aa14.07□□□□□ -0.16
GTF2I-208ENST00000482232 POTEB3A0JP26 581 aa14.02□□□□□ -0.17
GTF2I-208ENST00000482232 POTEBQ6S5H4 581 aa14.02□□□□□ -0.17
GTF2I-208ENST00000482232 ERBB3P21860 1342 aa14□□□□□ -0.17
GTF2I-208ENST00000482232 PSDA5PKW4 1024 aaPredicted RBP14□□□□□ -0.17
GTF2I-208ENST00000482232 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
GTF2I-208ENST00000482232 FOSBP53539 338 aa13.99□□□□□ -0.17
GTF2I-208ENST00000482232 POTEGQ6S5H5 508 aa13.99□□□□□ -0.17
GTF2I-208ENST00000482232 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
GTF2I-208ENST00000482232 HS3ST6Q96QI5 342 aa13.99□□□□□ -0.17
GTF2I-208ENST00000482232 POTEMA6NI47 508 aa13.98□□□□□ -0.17
GTF2I-208ENST00000482232 VARS2Q5ST30 1063 aaKnown RBP13.98□□□□□ -0.17
GTF2I-208ENST00000482232 PHF14O94880 888 aa13.97□□□□□ -0.17
GTF2I-208ENST00000482232 SEMA3EO15041 775 aa13.96□□□□□ -0.17
GTF2I-208ENST00000482232 PCDHGA10Q9Y5H3 936 aa13.95□□□□□ -0.18
GTF2I-208ENST00000482232 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
GTF2I-208ENST00000482232 MLLT3P42568 568 aaPredicted RBP13.92□□□□□ -0.18
GTF2I-208ENST00000482232 ZNF687Q8N1G0 1237 aa13.92□□□□□ -0.18
GTF2I-208ENST00000482232 ZNF454Q8N9F8 522 aa13.92□□□□□ -0.18
GTF2I-208ENST00000482232 DDX12PQ92771 950 aa13.92□□□□□ -0.18
GTF2I-208ENST00000482232 EPAS1Q99814 870 aa13.92□□□□□ -0.18
GTF2I-208ENST00000482232 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
GTF2I-208ENST00000482232 OSBPP22059 807 aa13.89□□□□□ -0.19
GTF2I-208ENST00000482232 TYW1BQ6NUM6 668 aa13.89□□□□□ -0.19
GTF2I-208ENST00000482232 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
GTF2I-208ENST00000482232 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
GTF2I-208ENST00000482232 GRXCR2A6NFK2 248 aa13.86□□□□□ -0.19
GTF2I-208ENST00000482232 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
GTF2I-208ENST00000482232 POTEEQ6S8J3 1075 aa13.86□□□□□ -0.19
GTF2I-208ENST00000482232 BCL2L12Q9HB09 334 aa13.86□□□□□ -0.19
GTF2I-208ENST00000482232 ADAM33Q9BZ11 813 aa13.85□□□□□ -0.19
GTF2I-208ENST00000482232 NBR1Q14596 966 aa13.84□□□□□ -0.19
GTF2I-208ENST00000482232 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
GTF2I-208ENST00000482232 PBX2P40425 430 aa13.82□□□□□ -0.2
GTF2I-208ENST00000482232 CDAN1Q8IWY9 1227 aa13.8□□□□□ -0.2
GTF2I-208ENST00000482232 SMYD5Q6GMV2 418 aa13.79□□□□□ -0.2
GTF2I-208ENST00000482232 ARHGAP33O14559 1287 aa13.78□□□□□ -0.2
GTF2I-208ENST00000482232 KRTAP3-3Q9BYR6 98 aa13.78□□□□□ -0.2
GTF2I-208ENST00000482232 KRTAP3-2Q9BYR7 98 aa13.78□□□□□ -0.2
GTF2I-208ENST00000482232 PCDH10Q9P2E7 1040 aa13.78□□□□□ -0.2
GTF2I-208ENST00000482232 C6orf132Q5T0Z8 1188 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms