RNA–Protein interactions for RNA: ENST00000482229.1

NEPRO-216, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 814 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-216ENST00000482229 ZFP91Q96JP5 570 aaPredicted RBP13.05□□□□□ -0.32
NEPRO-216ENST00000482229 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
NEPRO-216ENST00000482229 PHF8Q9UPP1 1060 aa13.04□□□□□ -0.32
NEPRO-216ENST00000482229 VGFO15240 615 aaPredicted RBP13.03□□□□□ -0.32
NEPRO-216ENST00000482229 MYT1LQ9UL68 1186 aa12.99□□□□□ -0.33
NEPRO-216ENST00000482229 ARSIQ5FYB1 569 aa12.95□□□□□ -0.34
NEPRO-216ENST00000482229 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
NEPRO-216ENST00000482229 NLRP6P59044 892 aa12.92□□□□□ -0.34
NEPRO-216ENST00000482229 PTGER2P43116 358 aa12.91□□□□□ -0.34
NEPRO-216ENST00000482229 ZNF316A6NFI3 1004 aaPredicted RBP12.89□□□□□ -0.35
NEPRO-216ENST00000482229 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEPRO-216ENST00000482229 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
NEPRO-216ENST00000482229 KIF3CO14782 793 aa12.84□□□□□ -0.35
NEPRO-216ENST00000482229 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
NEPRO-216ENST00000482229 MFRPQ9BY79 579 aa12.83□□□□□ -0.36
NEPRO-216ENST00000482229 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
NEPRO-216ENST00000482229 LSM11P83369 360 aaKnown RBP eCLIP12.81□□□□□ -0.36
NEPRO-216ENST00000482229 STK24Q9Y6E0 443 aa12.8□□□□□ -0.36
NEPRO-216ENST00000482229 C2orf72A6NCS6 295 aa12.79□□□□□ -0.36
NEPRO-216ENST00000482229 SLC34A2O95436 690 aa12.75□□□□□ -0.37
NEPRO-216ENST00000482229 PBX2P40425 430 aa12.75□□□□□ -0.37
NEPRO-216ENST00000482229 NUDT7P0C024 238 aa12.74□□□□□ -0.37
NEPRO-216ENST00000482229 POTEEQ6S8J3 1075 aa12.73□□□□□ -0.37
NEPRO-216ENST00000482229 STK25O00506 426 aa12.72□□□□□ -0.37
NEPRO-216ENST00000482229 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
NEPRO-216ENST00000482229 PCDHGA4Q9Y5G9 962 aa12.71□□□□□ -0.37
NEPRO-216ENST00000482229 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
NEPRO-216ENST00000482229 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
NEPRO-216ENST00000482229 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
NEPRO-216ENST00000482229 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
NEPRO-216ENST00000482229 ARHGAP33O14559 1287 aa12.58□□□□□ -0.4
NEPRO-216ENST00000482229 RGL2O15211 777 aa12.58□□□□□ -0.4
NEPRO-216ENST00000482229 PPP1R37O75864 691 aa12.58□□□□□ -0.4
NEPRO-216ENST00000482229 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
NEPRO-216ENST00000482229 ADGRD1Q6QNK2 874 aa12.57□□□□□ -0.4
NEPRO-216ENST00000482229 HCSTQ9UBK5 93 aa12.57□□□□□ -0.4
NEPRO-216ENST00000482229 PKD2Q13563 968 aa12.56□□□□□ -0.4
NEPRO-216ENST00000482229 PTCD2Q8WV60 388 aaKnown RBP12.55□□□□□ -0.4
NEPRO-216ENST00000482229 PLA2G2EQ9NZK7 142 aa12.55□□□□□ -0.4
NEPRO-216ENST00000482229 TK2O00142 265 aa12.51□□□□□ -0.41
NEPRO-216ENST00000482229 HRO43593 1189 aa12.5□□□□□ -0.41
NEPRO-216ENST00000482229 FOXK1P85037 733 aa12.48□□□□□ -0.41
NEPRO-216ENST00000482229 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
NEPRO-216ENST00000482229 PSEN2P49810 448 aa12.46□□□□□ -0.41
NEPRO-216ENST00000482229 PLPP6Q8IY26 295 aa12.44□□□□□ -0.42
NEPRO-216ENST00000482229 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
NEPRO-216ENST00000482229 PPP4R3BQ5MIZ7 849 aa12.41□□□□□ -0.42
NEPRO-216ENST00000482229 DSG2Q14126 1118 aa12.39□□□□□ -0.43
NEPRO-216ENST00000482229 TBC1D12O60347 775 aa12.38□□□□□ -0.43
NEPRO-216ENST00000482229 KCTD12Q96CX2 325 aaKnown RBP12.36□□□□□ -0.43
NEPRO-216ENST00000482229 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
NEPRO-216ENST00000482229 KCNK17Q96T54 332 aa12.32□□□□□ -0.44
NEPRO-216ENST00000482229 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
NEPRO-216ENST00000482229 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
NEPRO-216ENST00000482229 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
NEPRO-216ENST00000482229 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
NEPRO-216ENST00000482229 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.45
NEPRO-216ENST00000482229 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
NEPRO-216ENST00000482229 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
NEPRO-216ENST00000482229 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
NEPRO-216ENST00000482229 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
NEPRO-216ENST00000482229 CRISPLD2Q9H0B8 497 aa12.22□□□□□ -0.45
NEPRO-216ENST00000482229 PTPN5P54829 565 aa12.21□□□□□ -0.45
NEPRO-216ENST00000482229 UPF1Q92900 1129 aaKnown RBP eCLIP12.21□□□□□ -0.45
NEPRO-216ENST00000482229 DNAJC5Q9H3Z4 198 aa12.21□□□□□ -0.45
NEPRO-216ENST00000482229 FOSBP53539 338 aa12.2□□□□□ -0.46
NEPRO-216ENST00000482229 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
NEPRO-216ENST00000482229 RGS20O76081 388 aa12.18□□□□□ -0.46
NEPRO-216ENST00000482229 CHGAP10645 457 aaKnown RBP12.17□□□□□ -0.46
NEPRO-216ENST00000482229 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
NEPRO-216ENST00000482229 THSD4Q6ZMP0 1018 aa12.17□□□□□ -0.46
NEPRO-216ENST00000482229 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
NEPRO-216ENST00000482229 PTPREP23469 700 aa12.16□□□□□ -0.46
NEPRO-216ENST00000482229 ZBED2Q9BTP6 218 aa12.16□□□□□ -0.46
NEPRO-216ENST00000482229 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
NEPRO-216ENST00000482229 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
NEPRO-216ENST00000482229 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
NEPRO-216ENST00000482229 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
NEPRO-216ENST00000482229 WNT2BQ93097 391 aa12.1□□□□□ -0.47
NEPRO-216ENST00000482229 A0A0G2JS52 829 aa12.09□□□□□ -0.47
NEPRO-216ENST00000482229 PDE4AP27815 886 aa12.09□□□□□ -0.47
NEPRO-216ENST00000482229 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
NEPRO-216ENST00000482229 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
NEPRO-216ENST00000482229 EVI5O60447 810 aa12.08□□□□□ -0.48
NEPRO-216ENST00000482229 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
NEPRO-216ENST00000482229 NBPF3Q9H094 633 aa12.05□□□□□ -0.48
NEPRO-216ENST00000482229 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
NEPRO-216ENST00000482229 LARP6Q9BRS8 491 aaKnown RBP11.99□□□□□ -0.49
NEPRO-216ENST00000482229 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
NEPRO-216ENST00000482229 MFSD10Q14728 455 aa11.98□□□□□ -0.49
NEPRO-216ENST00000482229 DDX27Q96GQ7 796 aaKnown RBP11.98□□□□□ -0.49
NEPRO-216ENST00000482229 RABGEF1Q9UJ41 708 aa11.98□□□□□ -0.49
NEPRO-216ENST00000482229 MAP3K9P80192 1104 aa11.97□□□□□ -0.49
NEPRO-216ENST00000482229 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
NEPRO-216ENST00000482229 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
NEPRO-216ENST00000482229 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
NEPRO-216ENST00000482229 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
NEPRO-216ENST00000482229 PROX2Q3B8N5 592 aa11.94□□□□□ -0.5
NEPRO-216ENST00000482229 COL9A1P20849 921 aa11.93□□□□□ -0.5
NEPRO-216ENST00000482229 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms