RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 PREX2Q70Z35 1606 aa19■□□□□ 0.63
IFT88-206ENST00000482172 CFDP1Q9UEE9 299 aaPredicted RBP19■□□□□ 0.63
IFT88-206ENST00000482172 ARAP3Q8WWN8 1544 aa19■□□□□ 0.63
IFT88-206ENST00000482172 PLCH2O75038 1416 aa19■□□□□ 0.63
IFT88-206ENST00000482172 MYO5CQ9NQX4 1742 aa18.99■□□□□ 0.63
IFT88-206ENST00000482172 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
IFT88-206ENST00000482172 GLI2P10070 1586 aa18.97■□□□□ 0.63
IFT88-206ENST00000482172 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
IFT88-206ENST00000482172 ARHGAP5Q13017 1502 aa18.93■□□□□ 0.62
IFT88-206ENST00000482172 CAMSAP2Q08AD1 1489 aa18.92■□□□□ 0.62
IFT88-206ENST00000482172 EFCAB2Q5VUJ9 269 aa18.91■□□□□ 0.62
IFT88-206ENST00000482172 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
IFT88-206ENST00000482172 DIP2BQ9P265 1576 aa18.9■□□□□ 0.62
IFT88-206ENST00000482172 CD109Q6YHK3 1445 aa18.9■□□□□ 0.62
IFT88-206ENST00000482172 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
IFT88-206ENST00000482172 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.61
IFT88-206ENST00000482172 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
IFT88-206ENST00000482172 KIAA1107Q9UPP5 1409 aa18.88■□□□□ 0.61
IFT88-206ENST00000482172 MAP3K4Q9Y6R4 1608 aa18.88■□□□□ 0.61
IFT88-206ENST00000482172 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
IFT88-206ENST00000482172 RSPH4AQ5TD94 716 aa18.87■□□□□ 0.61
IFT88-206ENST00000482172 PPP6R1Q9UPN7 881 aa18.86■□□□□ 0.61
IFT88-206ENST00000482172 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
IFT88-206ENST00000482172 FANCAO15360 1455 aa18.85■□□□□ 0.61
IFT88-206ENST00000482172 CFAP74Q9C0B2 1584 aa18.85■□□□□ 0.61
IFT88-206ENST00000482172 DAPK1P53355 1430 aa18.84■□□□□ 0.61
IFT88-206ENST00000482172 FAM69CQ0P6D2 419 aa18.84■□□□□ 0.61
IFT88-206ENST00000482172 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
IFT88-206ENST00000482172 ABCC5O15440 1437 aa18.83■□□□□ 0.61
IFT88-206ENST00000482172 ITGAEP38570 1179 aa18.83■□□□□ 0.6
IFT88-206ENST00000482172 ABCC1P33527 1531 aa18.82■□□□□ 0.6
IFT88-206ENST00000482172 PTPRKQ15262 1439 aa18.82■□□□□ 0.6
IFT88-206ENST00000482172 ADRA2BP18089 450 aa18.81■□□□□ 0.6
IFT88-206ENST00000482172 NEO1Q92859 1461 aa18.81■□□□□ 0.6
IFT88-206ENST00000482172 SYCP2Q9BX26 1530 aa18.79■□□□□ 0.6
IFT88-206ENST00000482172 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
IFT88-206ENST00000482172 CCDC141Q6ZP82 1450 aa18.79■□□□□ 0.6
IFT88-206ENST00000482172 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
IFT88-206ENST00000482172 AKNAQ7Z591 1439 aa18.79■□□□□ 0.6
IFT88-206ENST00000482172 ROCK1Q13464 1354 aa18.79■□□□□ 0.6
IFT88-206ENST00000482172 CROCC2H7BZ55 1655 aa18.79■□□□□ 0.6
IFT88-206ENST00000482172 HNRNPMP52272 730 aaKnown RBP eCLIP18.78■□□□□ 0.6
IFT88-206ENST00000482172 PIAS4Q8N2W9 510 aaPredicted RBP18.77■□□□□ 0.6
IFT88-206ENST00000482172 ARHGEF12Q9NZN5 1544 aa18.77■□□□□ 0.6
IFT88-206ENST00000482172 ADGRL1O94910 1474 aa18.77■□□□□ 0.59
IFT88-206ENST00000482172 TEX14Q8IWB6 1497 aa18.76■□□□□ 0.59
IFT88-206ENST00000482172 TSPY4P0CV99 314 aa18.75■□□□□ 0.59
IFT88-206ENST00000482172 TSPY10P0CW01 314 aa18.75■□□□□ 0.59
IFT88-206ENST00000482172 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
IFT88-206ENST00000482172 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
IFT88-206ENST00000482172 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
IFT88-206ENST00000482172 SCAPERQ9BY12 1400 aa18.74■□□□□ 0.59
IFT88-206ENST00000482172 C9orf84Q5VXU9 1444 aa18.73■□□□□ 0.59
IFT88-206ENST00000482172 SETD5Q9C0A6 1442 aa18.73■□□□□ 0.59
IFT88-206ENST00000482172 PPRC1Q5VV67 1664 aaKnown RBP18.73■□□□□ 0.59
IFT88-206ENST00000482172 HRCP23327 699 aa18.72■□□□□ 0.59
IFT88-206ENST00000482172 ADGBQ8N7X0 1667 aa18.72■□□□□ 0.59
IFT88-206ENST00000482172 CHIC2Q9UKJ5 165 aa18.71■□□□□ 0.59
IFT88-206ENST00000482172 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.59
IFT88-206ENST00000482172 ANKRD30AQ9BXX3 1397 aa18.7■□□□□ 0.58
IFT88-206ENST00000482172 NCOA1Q15788 1441 aa18.7■□□□□ 0.58
IFT88-206ENST00000482172 RTEL1-TNFRSF6BF6WH68 1400 aa18.69■□□□□ 0.58
IFT88-206ENST00000482172 NAIPQ13075 1403 aa18.69■□□□□ 0.58
IFT88-206ENST00000482172 MSH5O43196 834 aa18.69■□□□□ 0.58
IFT88-206ENST00000482172 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
IFT88-206ENST00000482172 GCC2Q8IWJ2 1684 aa18.68■□□□□ 0.58
IFT88-206ENST00000482172 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
IFT88-206ENST00000482172 TSPOAP1O95153 1857 aa18.67■□□□□ 0.58
IFT88-206ENST00000482172 DENND4BO75064 1496 aaPredicted RBP18.66■□□□□ 0.58
IFT88-206ENST00000482172 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
IFT88-206ENST00000482172 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
IFT88-206ENST00000482172 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
IFT88-206ENST00000482172 PLXNC1O60486 1568 aa18.65■□□□□ 0.58
IFT88-206ENST00000482172 AFAP1Q8N556 730 aa18.65■□□□□ 0.58
IFT88-206ENST00000482172 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
IFT88-206ENST00000482172 KDM5CP41229 1560 aa18.64■□□□□ 0.58
IFT88-206ENST00000482172 ZFYVE16Q7Z3T8 1539 aa18.62■□□□□ 0.57
IFT88-206ENST00000482172 INO80Q9ULG1 1556 aaPredicted RBP18.62■□□□□ 0.57
IFT88-206ENST00000482172 MLH3Q9UHC1 1453 aa18.61■□□□□ 0.57
IFT88-206ENST00000482172 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
IFT88-206ENST00000482172 ATP7AQ04656 1500 aa18.6■□□□□ 0.57
IFT88-206ENST00000482172 KIF15Q9NS87 1388 aa18.6■□□□□ 0.57
IFT88-206ENST00000482172 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
IFT88-206ENST00000482172 DUOX2Q9NRD8 1548 aa18.58■□□□□ 0.56
IFT88-206ENST00000482172 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
IFT88-206ENST00000482172 HECW2Q9P2P5 1572 aa18.57■□□□□ 0.56
IFT88-206ENST00000482172 ZMYM4Q5VZL5 1548 aa18.57■□□□□ 0.56
IFT88-206ENST00000482172 KIDINS220Q9ULH0 1771 aa18.56■□□□□ 0.56
IFT88-206ENST00000482172 RAPGEF3O95398 923 aa18.56■□□□□ 0.56
IFT88-206ENST00000482172 FRMPD1Q5SYB0 1578 aa18.55■□□□□ 0.56
IFT88-206ENST00000482172 MAGI2Q86UL8 1455 aa18.55■□□□□ 0.56
IFT88-206ENST00000482172 ERBINQ96RT1 1412 aa18.54■□□□□ 0.56
IFT88-206ENST00000482172 KDM6BO15054 1643 aa18.53■□□□□ 0.56
IFT88-206ENST00000482172 MYT1LQ9UL68 1186 aa18.51■□□□□ 0.55
IFT88-206ENST00000482172 COL17A1Q9UMD9 1497 aaPredicted RBP18.51■□□□□ 0.55
IFT88-206ENST00000482172 DHX57Q6P158 1386 aaKnown RBP18.5■□□□□ 0.55
IFT88-206ENST00000482172 DHX29Q7Z478 1369 aaKnown RBP18.5■□□□□ 0.55
IFT88-206ENST00000482172 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
IFT88-206ENST00000482172 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
IFT88-206ENST00000482172 EIF2AK4Q9P2K8 1649 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms