RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 PREX2Q70Z35 1606 aa23.62■■□□□ 1.37
OPTN-210ENST00000482140 CDC42BPBQ9Y5S2 1711 aa23.62■■□□□ 1.37
OPTN-210ENST00000482140 MTUS2Q5JR59 1369 aa23.61■■□□□ 1.37
OPTN-210ENST00000482140 CDC42BPAQ5VT25 1732 aa23.58■■□□□ 1.37
OPTN-210ENST00000482140 ZMYM4Q5VZL5 1548 aa23.58■■□□□ 1.36
OPTN-210ENST00000482140 POGZQ7Z3K3 1410 aa23.58■■□□□ 1.36
OPTN-210ENST00000482140 ARHGEF40Q8TER5 1519 aa23.57■■□□□ 1.36
OPTN-210ENST00000482140 VPS8Q8N3P4 1428 aa23.55■■□□□ 1.36
OPTN-210ENST00000482140 EHBP1L1Q8N3D4 1523 aa23.54■■□□□ 1.36
OPTN-210ENST00000482140 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
OPTN-210ENST00000482140 MAGI2Q86UL8 1455 aa23.53■■□□□ 1.36
OPTN-210ENST00000482140 ZNF518AQ6AHZ1 1483 aa23.52■■□□□ 1.36
OPTN-210ENST00000482140 ARID4BQ4LE39 1312 aaPredicted RBP23.52■■□□□ 1.36
OPTN-210ENST00000482140 CCNB3Q8WWL7 1395 aa23.51■■□□□ 1.35
OPTN-210ENST00000482140 YEATS2Q9ULM3 1422 aa23.49■■□□□ 1.35
OPTN-210ENST00000482140 ABCC1P33527 1531 aa23.49■■□□□ 1.35
OPTN-210ENST00000482140 GPATCH8Q9UKJ3 1502 aaKnown RBP23.49■■□□□ 1.35
OPTN-210ENST00000482140 ZNF777Q9ULD5 760 aaPredicted RBP23.48■■□□□ 1.35
OPTN-210ENST00000482140 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
OPTN-210ENST00000482140 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
OPTN-210ENST00000482140 TIAM1Q13009 1591 aa23.47■■□□□ 1.35
OPTN-210ENST00000482140 KDM5CP41229 1560 aa23.45■■□□□ 1.34
OPTN-210ENST00000482140 AFAP1Q8N556 730 aa23.45■■□□□ 1.34
OPTN-210ENST00000482140 CFDP1Q9UEE9 299 aaPredicted RBP23.45■■□□□ 1.34
OPTN-210ENST00000482140 BCORL1Q5H9F3 1711 aa23.45■■□□□ 1.34
OPTN-210ENST00000482140 SUPT6HQ7KZ85 1726 aaKnown RBP23.44■■□□□ 1.34
OPTN-210ENST00000482140 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
OPTN-210ENST00000482140 HECW2Q9P2P5 1572 aa23.43■■□□□ 1.34
OPTN-210ENST00000482140 ADAMTSL3P82987 1691 aa23.41■■□□□ 1.34
OPTN-210ENST00000482140 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
OPTN-210ENST00000482140 ATP10AO60312 1499 aa23.41■■□□□ 1.34
OPTN-210ENST00000482140 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
OPTN-210ENST00000482140 SYCP2Q9BX26 1530 aa23.39■■□□□ 1.34
OPTN-210ENST00000482140 PLEKHH2Q8IVE3 1493 aa23.39■■□□□ 1.34
OPTN-210ENST00000482140 C9orf84Q5VXU9 1444 aa23.39■■□□□ 1.33
OPTN-210ENST00000482140 NCOA2Q15596 1464 aa23.37■■□□□ 1.33
OPTN-210ENST00000482140 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
OPTN-210ENST00000482140 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
OPTN-210ENST00000482140 MADDQ8WXG6 1647 aa23.36■■□□□ 1.33
OPTN-210ENST00000482140 SIGLEC1Q9BZZ2 1709 aa23.36■■□□□ 1.33
OPTN-210ENST00000482140 LRRC9Q6ZRR7 1453 aa23.36■■□□□ 1.33
OPTN-210ENST00000482140 HNRNPMP52272 730 aaKnown RBP eCLIP23.35■■□□□ 1.33
OPTN-210ENST00000482140 APLP2Q06481 763 aa23.34■■□□□ 1.33
OPTN-210ENST00000482140 DIP2CQ9Y2E4 1556 aa23.34■■□□□ 1.33
OPTN-210ENST00000482140 KIAA1107Q9UPP5 1409 aa23.33■■□□□ 1.33
OPTN-210ENST00000482140 ABCA6Q8N139 1617 aa23.33■■□□□ 1.32
OPTN-210ENST00000482140 MLECQ14165 292 aa23.32■■□□□ 1.32
OPTN-210ENST00000482140 RIMS1Q86UR5 1692 aaKnown RBP23.32■■□□□ 1.32
OPTN-210ENST00000482140 KIDINS220Q9ULH0 1771 aa23.31■■□□□ 1.32
OPTN-210ENST00000482140 PTPRMP28827 1452 aa23.3■■□□□ 1.32
OPTN-210ENST00000482140 SPAG9O60271 1321 aaKnown RBP23.3■■□□□ 1.32
OPTN-210ENST00000482140 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
OPTN-210ENST00000482140 REREQ9P2R6 1566 aa23.27■■□□□ 1.32
OPTN-210ENST00000482140 FER1L4A9Z1Z3 1794 aa23.27■■□□□ 1.32
OPTN-210ENST00000482140 KANK4Q5T7N3 995 aaPredicted RBP23.27■■□□□ 1.32
OPTN-210ENST00000482140 ATP7AQ04656 1500 aa23.25■■□□□ 1.31
OPTN-210ENST00000482140 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
OPTN-210ENST00000482140 INO80Q9ULG1 1556 aaPredicted RBP23.23■■□□□ 1.31
OPTN-210ENST00000482140 MBD5Q9P267 1494 aa23.21■■□□□ 1.31
OPTN-210ENST00000482140 AGLP35573 1532 aa23.2■■□□□ 1.3
OPTN-210ENST00000482140 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
OPTN-210ENST00000482140 CCDC141Q6ZP82 1450 aa23.17■■□□□ 1.3
OPTN-210ENST00000482140 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
OPTN-210ENST00000482140 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
OPTN-210ENST00000482140 ADGBQ8N7X0 1667 aa23.15■■□□□ 1.3
OPTN-210ENST00000482140 A2MP01023 1474 aa23.14■■□□□ 1.29
OPTN-210ENST00000482140 ESF1Q9H501 851 aaKnown RBP23.14■■□□□ 1.29
OPTN-210ENST00000482140 RTEL1-TNFRSF6BF6WH68 1400 aa23.14■■□□□ 1.29
OPTN-210ENST00000482140 MIA2Q96PC5 1412 aa23.14■■□□□ 1.29
OPTN-210ENST00000482140 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
OPTN-210ENST00000482140 TSPY4P0CV99 314 aa23.1■■□□□ 1.29
OPTN-210ENST00000482140 TSPY10P0CW01 314 aa23.1■■□□□ 1.29
OPTN-210ENST00000482140 PLXNC1O60486 1568 aa23.1■■□□□ 1.29
OPTN-210ENST00000482140 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
OPTN-210ENST00000482140 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
OPTN-210ENST00000482140 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
OPTN-210ENST00000482140 DHX29Q7Z478 1369 aaKnown RBP23.02■■□□□ 1.28
OPTN-210ENST00000482140 C3P01024 1663 aa23.02■■□□□ 1.28
OPTN-210ENST00000482140 LMTK3Q96Q04 1460 aa23.01■■□□□ 1.27
OPTN-210ENST00000482140 GGT6Q6P531 493 aa23.01■■□□□ 1.27
OPTN-210ENST00000482140 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
OPTN-210ENST00000482140 FGD6Q6ZV73 1430 aa23■■□□□ 1.27
OPTN-210ENST00000482140 MROH2AA6NES4 1674 aa22.99■■□□□ 1.27
OPTN-210ENST00000482140 PREX1Q8TCU6 1659 aa22.99■■□□□ 1.27
OPTN-210ENST00000482140 CLTCQ00610 1675 aaKnown RBP22.98■■□□□ 1.27
OPTN-210ENST00000482140 SETD1BQ9UPS6 1966 aaKnown RBP22.98■■□□□ 1.27
OPTN-210ENST00000482140 KIF3BO15066 747 aa22.96■■□□□ 1.27
OPTN-210ENST00000482140 CROCC2H7BZ55 1655 aa22.95■■□□□ 1.26
OPTN-210ENST00000482140 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
OPTN-210ENST00000482140 PPP6R1Q9UPN7 881 aa22.94■■□□□ 1.26
OPTN-210ENST00000482140 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
OPTN-210ENST00000482140 UHRF1BP1Q6BDS2 1440 aa22.92■■□□□ 1.26
OPTN-210ENST00000482140 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
OPTN-210ENST00000482140 HSPA2P54652 639 aa22.92■■□□□ 1.26
OPTN-210ENST00000482140 SHANK2Q9UPX8 1470 aa22.92■■□□□ 1.26
OPTN-210ENST00000482140 ABCC5O15440 1437 aa22.91■■□□□ 1.26
OPTN-210ENST00000482140 DAPK1P53355 1430 aa22.91■■□□□ 1.26
OPTN-210ENST00000482140 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
OPTN-210ENST00000482140 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
OPTN-210ENST00000482140 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms