RNA–Protein interactions for RNA: ENST00000482128.1

SEMA4D-218, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-218ENST00000482128 MIA2Q96PC5 1412 aa29.92■■■□□ 2.38
SEMA4D-218ENST00000482128 EFCAB2Q5VUJ9 269 aa29.89■■■□□ 2.38
SEMA4D-218ENST00000482128 FGD6Q6ZV73 1430 aa29.88■■■□□ 2.37
SEMA4D-218ENST00000482128 TEX14Q8IWB6 1497 aa29.87■■■□□ 2.37
SEMA4D-218ENST00000482128 FANCAO15360 1455 aa29.86■■■□□ 2.37
SEMA4D-218ENST00000482128 CDC42BPBQ9Y5S2 1711 aa29.85■■■□□ 2.37
SEMA4D-218ENST00000482128 CFAP74Q9C0B2 1584 aa29.85■■■□□ 2.37
SEMA4D-218ENST00000482128 ZNF777Q9ULD5 760 aaPredicted RBP29.82■■■□□ 2.36
SEMA4D-218ENST00000482128 NEO1Q92859 1461 aa29.81■■■□□ 2.36
SEMA4D-218ENST00000482128 RRBP1Q9P2E9 1410 aaKnown RBP29.79■■■□□ 2.36
SEMA4D-218ENST00000482128 PLEKHH2Q8IVE3 1493 aa29.79■■■□□ 2.36
SEMA4D-218ENST00000482128 PTPN23Q9H3S7 1636 aa29.78■■■□□ 2.36
SEMA4D-218ENST00000482128 TSPOAP1O95153 1857 aa29.78■■■□□ 2.36
SEMA4D-218ENST00000482128 PPRC1Q5VV67 1664 aaKnown RBP29.77■■■□□ 2.36
SEMA4D-218ENST00000482128 CAMSAP2Q08AD1 1489 aa29.77■■■□□ 2.36
SEMA4D-218ENST00000482128 TCOF1Q13428 1488 aaKnown RBP29.77■■■□□ 2.36
SEMA4D-218ENST00000482128 AKNAQ7Z591 1439 aa29.76■■■□□ 2.35
SEMA4D-218ENST00000482128 SAMD9LQ8IVG5 1584 aa29.74■■■□□ 2.35
SEMA4D-218ENST00000482128 FAM50AQ14320 339 aaKnown RBP29.73■■■□□ 2.35
SEMA4D-218ENST00000482128 ZNF644Q9H582 1327 aaPredicted RBP29.72■■■□□ 2.35
SEMA4D-218ENST00000482128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.72■■■□□ 2.35
SEMA4D-218ENST00000482128 ADGRL1O94910 1474 aa29.72■■■□□ 2.35
SEMA4D-218ENST00000482128 KIAA1107Q9UPP5 1409 aa29.71■■■□□ 2.35
SEMA4D-218ENST00000482128 ABCC1P33527 1531 aa29.71■■■□□ 2.35
SEMA4D-218ENST00000482128 SYCP2Q9BX26 1530 aa29.66■■■□□ 2.34
SEMA4D-218ENST00000482128 SCAPERQ9BY12 1400 aa29.66■■■□□ 2.34
SEMA4D-218ENST00000482128 RSPH4AQ5TD94 716 aa29.64■■■□□ 2.34
SEMA4D-218ENST00000482128 HNRNPMP52272 730 aaKnown RBP eCLIP29.62■■■□□ 2.33
SEMA4D-218ENST00000482128 DENND4BO75064 1496 aaPredicted RBP29.61■■■□□ 2.33
SEMA4D-218ENST00000482128 MBD5Q9P267 1494 aa29.61■■■□□ 2.33
SEMA4D-218ENST00000482128 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
SEMA4D-218ENST00000482128 ARHGEF5Q12774 1597 aa29.6■■■□□ 2.33
SEMA4D-218ENST00000482128 CCDC141Q6ZP82 1450 aa29.6■■■□□ 2.33
SEMA4D-218ENST00000482128 TRIM26Q12899 539 aaPredicted RBP29.58■■■□□ 2.33
SEMA4D-218ENST00000482128 POGZQ7Z3K3 1410 aa29.58■■■□□ 2.33
SEMA4D-218ENST00000482128 ZNF518AQ6AHZ1 1483 aa29.57■■■□□ 2.32
SEMA4D-218ENST00000482128 DNMT1P26358 1616 aaKnown RBP29.56■■■□□ 2.32
SEMA4D-218ENST00000482128 DAPK1P53355 1430 aa29.55■■■□□ 2.32
SEMA4D-218ENST00000482128 TRAPPC8Q9Y2L5 1435 aa29.55■■■□□ 2.32
SEMA4D-218ENST00000482128 TSPY4P0CV99 314 aa29.53■■■□□ 2.32
SEMA4D-218ENST00000482128 TSPY10P0CW01 314 aa29.53■■■□□ 2.32
SEMA4D-218ENST00000482128 ABCC5O15440 1437 aa29.53■■■□□ 2.32
SEMA4D-218ENST00000482128 SHANK2Q9UPX8 1470 aa29.5■■■□□ 2.31
SEMA4D-218ENST00000482128 ITGAEP38570 1179 aa29.5■■■□□ 2.31
SEMA4D-218ENST00000482128 AFAP1Q8N556 730 aa29.5■■■□□ 2.31
SEMA4D-218ENST00000482128 RAPGEF3O95398 923 aa29.49■■■□□ 2.31
SEMA4D-218ENST00000482128 KDM6BO15054 1643 aa29.48■■■□□ 2.31
SEMA4D-218ENST00000482128 KDM5CP41229 1560 aa29.47■■■□□ 2.31
SEMA4D-218ENST00000482128 SPAG9O60271 1321 aaKnown RBP29.46■■■□□ 2.31
SEMA4D-218ENST00000482128 C9orf84Q5VXU9 1444 aa29.46■■■□□ 2.31
SEMA4D-218ENST00000482128 RICTORQ6R327 1708 aa29.46■■■□□ 2.31
SEMA4D-218ENST00000482128 COL17A1Q9UMD9 1497 aaPredicted RBP29.46■■■□□ 2.31
SEMA4D-218ENST00000482128 CROCC2H7BZ55 1655 aa29.46■■■□□ 2.31
SEMA4D-218ENST00000482128 FRMPD1Q5SYB0 1578 aa29.43■■■□□ 2.3
SEMA4D-218ENST00000482128 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
SEMA4D-218ENST00000482128 ZMYM4Q5VZL5 1548 aa29.42■■■□□ 2.3
SEMA4D-218ENST00000482128 MYT1LQ9UL68 1186 aa29.42■■■□□ 2.3
SEMA4D-218ENST00000482128 RTEL1-TNFRSF6BF6WH68 1400 aa29.42■■■□□ 2.3
SEMA4D-218ENST00000482128 PTPRKQ15262 1439 aa29.41■■■□□ 2.3
SEMA4D-218ENST00000482128 MLH3Q9UHC1 1453 aa29.41■■■□□ 2.3
SEMA4D-218ENST00000482128 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.3
SEMA4D-218ENST00000482128 CHIC2Q9UKJ5 165 aa29.39■■■□□ 2.3
SEMA4D-218ENST00000482128 MAGI2Q86UL8 1455 aa29.39■■■□□ 2.3
SEMA4D-218ENST00000482128 ZFYVE16Q7Z3T8 1539 aa29.39■■■□□ 2.3
SEMA4D-218ENST00000482128 ATP7AQ04656 1500 aa29.38■■■□□ 2.29
SEMA4D-218ENST00000482128 INO80Q9ULG1 1556 aaPredicted RBP29.38■■■□□ 2.29
SEMA4D-218ENST00000482128 ANKRD30AQ9BXX3 1397 aa29.38■■■□□ 2.29
SEMA4D-218ENST00000482128 ADGRL2O95490 1459 aa29.37■■■□□ 2.29
SEMA4D-218ENST00000482128 ROCK1Q13464 1354 aa29.37■■■□□ 2.29
SEMA4D-218ENST00000482128 ADGBQ8N7X0 1667 aa29.34■■■□□ 2.29
SEMA4D-218ENST00000482128 PLXNC1O60486 1568 aa29.31■■■□□ 2.28
SEMA4D-218ENST00000482128 NCOA1Q15788 1441 aa29.31■■■□□ 2.28
SEMA4D-218ENST00000482128 KIDINS220Q9ULH0 1771 aa29.29■■■□□ 2.28
SEMA4D-218ENST00000482128 KIF15Q9NS87 1388 aa29.28■■■□□ 2.28
SEMA4D-218ENST00000482128 PCGF6Q9BYE7 350 aa29.26■■■□□ 2.27
SEMA4D-218ENST00000482128 RRP7BPQ9NSQ0 103 aa29.26■■■□□ 2.27
SEMA4D-218ENST00000482128 HFM1A2PYH4 1435 aa29.25■■■□□ 2.27
SEMA4D-218ENST00000482128 YEATS2Q9ULM3 1422 aa29.25■■■□□ 2.27
SEMA4D-218ENST00000482128 ARHGEF40Q8TER5 1519 aa29.25■■■□□ 2.27
SEMA4D-218ENST00000482128 DIP2CQ9Y2E4 1556 aa29.23■■■□□ 2.27
SEMA4D-218ENST00000482128 ABCA6Q8N139 1617 aa29.23■■■□□ 2.27
SEMA4D-218ENST00000482128 DUOX2Q9NRD8 1548 aa29.22■■■□□ 2.27
SEMA4D-218ENST00000482128 ATP10AO60312 1499 aa29.21■■■□□ 2.27
SEMA4D-218ENST00000482128 A2MP01023 1474 aa29.19■■■□□ 2.26
SEMA4D-218ENST00000482128 NAIPQ13075 1403 aa29.19■■■□□ 2.26
SEMA4D-218ENST00000482128 DHX29Q7Z478 1369 aaKnown RBP29.17■■■□□ 2.26
SEMA4D-218ENST00000482128 GCC2Q8IWJ2 1684 aa29.17■■■□□ 2.26
SEMA4D-218ENST00000482128 ERBINQ96RT1 1412 aa29.17■■■□□ 2.26
SEMA4D-218ENST00000482128 ANKRD50Q9ULJ7 1429 aa29.16■■■□□ 2.26
SEMA4D-218ENST00000482128 SETD5Q9C0A6 1442 aa29.15■■■□□ 2.26
SEMA4D-218ENST00000482128 REREQ9P2R6 1566 aa29.14■■■□□ 2.26
SEMA4D-218ENST00000482128 EIF2AK4Q9P2K8 1649 aaKnown RBP29.07■■■□□ 2.24
SEMA4D-218ENST00000482128 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
SEMA4D-218ENST00000482128 AGLP35573 1532 aa29.05■■■□□ 2.24
SEMA4D-218ENST00000482128 RAB3GAP2Q9H2M9 1393 aa29.05■■■□□ 2.24
SEMA4D-218ENST00000482128 KIF3BO15066 747 aa29.02■■■□□ 2.24
SEMA4D-218ENST00000482128 HRCP23327 699 aa29.01■■■□□ 2.23
SEMA4D-218ENST00000482128 ARID4BQ4LE39 1312 aaPredicted RBP29■■■□□ 2.23
SEMA4D-218ENST00000482128 BCORL1Q5H9F3 1711 aa29■■■□□ 2.23
SEMA4D-218ENST00000482128 RNF17Q9BXT8 1623 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms