RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 NCKAP5LQ9HCH0 1330 aa10.25□□□□□ -0.77
PRKCB-206ENST00000482000 ZCCHC6Q5VYS8 1495 aaKnown RBP10.24□□□□□ -0.77
PRKCB-206ENST00000482000 MICALL2Q8IY33 904 aa10.24□□□□□ -0.77
PRKCB-206ENST00000482000 BOLA1Q9Y3E2 137 aa10.24□□□□□ -0.77
PRKCB-206ENST00000482000 L3MBTL3Q96JM7 780 aaPredicted RBP10.23□□□□□ -0.77
PRKCB-206ENST00000482000 PDE4AP27815 886 aa10.22□□□□□ -0.77
PRKCB-206ENST00000482000 CRISPLD2Q9H0B8 497 aa10.22□□□□□ -0.77
PRKCB-206ENST00000482000 WDR70Q9NW82 654 aa10.21□□□□□ -0.77
PRKCB-206ENST00000482000 DCAF1Q9Y4B6 1507 aa10.21□□□□□ -0.78
PRKCB-206ENST00000482000 LARP6Q9BRS8 491 aaKnown RBP10.19□□□□□ -0.78
PRKCB-206ENST00000482000 MFSD10Q14728 455 aa10.18□□□□□ -0.78
PRKCB-206ENST00000482000 G3V3G9 751 aa10.17□□□□□ -0.78
PRKCB-206ENST00000482000 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
PRKCB-206ENST00000482000 BCANQ96GW7 911 aa10.15□□□□□ -0.78
PRKCB-206ENST00000482000 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
PRKCB-206ENST00000482000 KIF3CO14782 793 aa10.12□□□□□ -0.79
PRKCB-206ENST00000482000 E2F4Q16254 413 aa10.12□□□□□ -0.79
PRKCB-206ENST00000482000 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
PRKCB-206ENST00000482000 P3H3Q8IVL6 736 aa10.11□□□□□ -0.79
PRKCB-206ENST00000482000 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
PRKCB-206ENST00000482000 TMC2Q8TDI7 906 aa10.1□□□□□ -0.79
PRKCB-206ENST00000482000 SCRIBQ14160 1630 aa10.09□□□□□ -0.79
PRKCB-206ENST00000482000 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
PRKCB-206ENST00000482000 FOXK1P85037 733 aa10.09□□□□□ -0.79
PRKCB-206ENST00000482000 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
PRKCB-206ENST00000482000 DSG2Q14126 1118 aa10.08□□□□□ -0.8
PRKCB-206ENST00000482000 PPP1R15BQ5SWA1 713 aa10.08□□□□□ -0.8
PRKCB-206ENST00000482000 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
PRKCB-206ENST00000482000 POTEB2H3BUK9 544 aa10.07□□□□□ -0.8
PRKCB-206ENST00000482000 POTEJP0CG39 1038 aa10.06□□□□□ -0.8
PRKCB-206ENST00000482000 ARHGEF1Q92888 912 aaKnown RBP10.06□□□□□ -0.8
PRKCB-206ENST00000482000 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
PRKCB-206ENST00000482000 NBR1Q14596 966 aa10.03□□□□□ -0.8
PRKCB-206ENST00000482000 PLPP6Q8IY26 295 aa10.03□□□□□ -0.8
PRKCB-206ENST00000482000 ARIH1Q9Y4X5 557 aaPredicted RBP10.03□□□□□ -0.8
PRKCB-206ENST00000482000 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.02□□□□□ -0.81
PRKCB-206ENST00000482000 EMILIN3Q9NT22 766 aa9.99□□□□□ -0.81
PRKCB-206ENST00000482000 CC2D2AQ9P2K1 1620 aa9.97□□□□□ -0.81
PRKCB-206ENST00000482000 EIF4G1Q04637 1599 aaKnown RBP9.97□□□□□ -0.81
PRKCB-206ENST00000482000 MAMSTRQ6ZN01 415 aa9.93□□□□□ -0.82
PRKCB-206ENST00000482000 DPYSL4O14531 572 aa9.92□□□□□ -0.82
PRKCB-206ENST00000482000 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
PRKCB-206ENST00000482000 SCUBE2Q9NQ36 999 aa9.92□□□□□ -0.82
PRKCB-206ENST00000482000 SEMA3EO15041 775 aa9.91□□□□□ -0.82
PRKCB-206ENST00000482000 SLC34A2O95436 690 aa9.91□□□□□ -0.82
PRKCB-206ENST00000482000 CECR2Q9BXF3 1484 aa9.91□□□□□ -0.82
PRKCB-206ENST00000482000 TESPA1A2RU30 521 aaPredicted RBP9.89□□□□□ -0.83
PRKCB-206ENST00000482000 SLAIN1Q8ND83 568 aa9.89□□□□□ -0.83
PRKCB-206ENST00000482000 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
PRKCB-206ENST00000482000 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
PRKCB-206ENST00000482000 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
PRKCB-206ENST00000482000 PDIA6Q15084 440 aa9.87□□□□□ -0.83
PRKCB-206ENST00000482000 UPF1Q92900 1129 aaKnown RBP eCLIP9.87□□□□□ -0.83
PRKCB-206ENST00000482000 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
PRKCB-206ENST00000482000 LHX8Q68G74 356 aa9.85□□□□□ -0.83
PRKCB-206ENST00000482000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRKCB-206ENST00000482000 TBC1D12O60347 775 aa9.83□□□□□ -0.84
PRKCB-206ENST00000482000 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
PRKCB-206ENST00000482000 MLLT3P42568 568 aaPredicted RBP9.81□□□□□ -0.84
PRKCB-206ENST00000482000 EVI5O60447 810 aa9.8□□□□□ -0.84
PRKCB-206ENST00000482000 SMYD5Q6GMV2 418 aa9.8□□□□□ -0.84
PRKCB-206ENST00000482000 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
PRKCB-206ENST00000482000 PCDHGA4Q9Y5G9 962 aa9.8□□□□□ -0.84
PRKCB-206ENST00000482000 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
PRKCB-206ENST00000482000 PTGER2P43116 358 aa9.79□□□□□ -0.84
PRKCB-206ENST00000482000 DOK7Q18PE1 504 aa9.79□□□□□ -0.84
PRKCB-206ENST00000482000 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
PRKCB-206ENST00000482000 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
PRKCB-206ENST00000482000 TPRNQ4KMQ1 711 aa9.78□□□□□ -0.84
PRKCB-206ENST00000482000 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
PRKCB-206ENST00000482000 ZSWIM6Q9HCJ5 1215 aa9.77□□□□□ -0.85
PRKCB-206ENST00000482000 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
PRKCB-206ENST00000482000 RIMBP2O15034 1052 aa9.74□□□□□ -0.85
PRKCB-206ENST00000482000 SNPHO15079 494 aa9.74□□□□□ -0.85
PRKCB-206ENST00000482000 GRXCR2A6NFK2 248 aa9.73□□□□□ -0.85
PRKCB-206ENST00000482000 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
PRKCB-206ENST00000482000 KHSRPQ92945 711 aaKnown RBP eCLIP9.72□□□□□ -0.85
PRKCB-206ENST00000482000 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.86
PRKCB-206ENST00000482000 OSBPP22059 807 aa9.71□□□□□ -0.86
PRKCB-206ENST00000482000 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
PRKCB-206ENST00000482000 ZNF710Q8N1W2 664 aa9.71□□□□□ -0.86
PRKCB-206ENST00000482000 DDX12PQ92771 950 aa9.71□□□□□ -0.86
PRKCB-206ENST00000482000 NUDT7P0C024 238 aa9.69□□□□□ -0.86
PRKCB-206ENST00000482000 PHF14O94880 888 aa9.68□□□□□ -0.86
PRKCB-206ENST00000482000 ZC3H15Q8WU90 426 aaKnown RBP9.68□□□□□ -0.86
PRKCB-206ENST00000482000 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
PRKCB-206ENST00000482000 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
PRKCB-206ENST00000482000 PCDHGA10Q9Y5H3 936 aa9.66□□□□□ -0.86
PRKCB-206ENST00000482000 EPAS1Q99814 870 aa9.65□□□□□ -0.86
PRKCB-206ENST00000482000 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
PRKCB-206ENST00000482000 FOSBP53539 338 aa9.64□□□□□ -0.87
PRKCB-206ENST00000482000 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
PRKCB-206ENST00000482000 GPIHBP1Q8IV16 184 aa9.63□□□□□ -0.87
PRKCB-206ENST00000482000 NCAPD3P42695 1498 aa9.63□□□□□ -0.87
PRKCB-206ENST00000482000 TYW1BQ6NUM6 668 aa9.62□□□□□ -0.87
PRKCB-206ENST00000482000 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
PRKCB-206ENST00000482000 ZMYND10O75800 440 aa9.61□□□□□ -0.87
PRKCB-206ENST00000482000 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
PRKCB-206ENST00000482000 ATAD2BQ9ULI0 1458 aa9.6□□□□□ -0.87
PRKCB-206ENST00000482000 GPR37O15354 613 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms