RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 ZFYVE16Q7Z3T8 1539 aa19.04■□□□□ 0.64
GARNL3-217ENST00000481875 SCAPERQ9BY12 1400 aa19.02■□□□□ 0.64
GARNL3-217ENST00000481875 EFCAB2Q5VUJ9 269 aa19.02■□□□□ 0.64
GARNL3-217ENST00000481875 TROQ12816 1431 aaPredicted RBP19.01■□□□□ 0.63
GARNL3-217ENST00000481875 YEATS2Q9ULM3 1422 aa19■□□□□ 0.63
GARNL3-217ENST00000481875 PCF11O94913 1555 aaKnown RBP19■□□□□ 0.63
GARNL3-217ENST00000481875 SIGLEC1Q9BZZ2 1709 aa19■□□□□ 0.63
GARNL3-217ENST00000481875 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
GARNL3-217ENST00000481875 KIF14Q15058 1648 aa18.99■□□□□ 0.63
GARNL3-217ENST00000481875 RIMS1Q86UR5 1692 aaKnown RBP18.98■□□□□ 0.63
GARNL3-217ENST00000481875 LMTK3Q96Q04 1460 aa18.98■□□□□ 0.63
GARNL3-217ENST00000481875 ATP10AO60312 1499 aa18.97■□□□□ 0.63
GARNL3-217ENST00000481875 CLIP1P30622 1438 aa18.96■□□□□ 0.63
GARNL3-217ENST00000481875 ZNF518AQ6AHZ1 1483 aa18.96■□□□□ 0.63
GARNL3-217ENST00000481875 KDM5CP41229 1560 aa18.95■□□□□ 0.62
GARNL3-217ENST00000481875 CASKIN1Q8WXD9 1431 aa18.94■□□□□ 0.62
GARNL3-217ENST00000481875 ATP1B4Q9UN42 357 aaPredicted RBP18.94■□□□□ 0.62
GARNL3-217ENST00000481875 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
GARNL3-217ENST00000481875 C9orf84Q5VXU9 1444 aa18.92■□□□□ 0.62
GARNL3-217ENST00000481875 CDC42BPBQ9Y5S2 1711 aa18.92■□□□□ 0.62
GARNL3-217ENST00000481875 ARHGEF12Q9NZN5 1544 aa18.92■□□□□ 0.62
GARNL3-217ENST00000481875 FER1L4A9Z1Z3 1794 aa18.91■□□□□ 0.62
GARNL3-217ENST00000481875 REREQ9P2R6 1566 aa18.9■□□□□ 0.62
GARNL3-217ENST00000481875 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
GARNL3-217ENST00000481875 EHMT2Q96KQ7 1210 aa18.89■□□□□ 0.61
GARNL3-217ENST00000481875 SETD1BQ9UPS6 1966 aaKnown RBP18.89■□□□□ 0.61
GARNL3-217ENST00000481875 MLH3Q9UHC1 1453 aa18.89■□□□□ 0.61
GARNL3-217ENST00000481875 FBXO41Q8TF61 875 aa18.88■□□□□ 0.61
GARNL3-217ENST00000481875 PREX2Q70Z35 1606 aa18.88■□□□□ 0.61
GARNL3-217ENST00000481875 ADRA2BP18089 450 aa18.86■□□□□ 0.61
GARNL3-217ENST00000481875 AFAP1Q8N556 730 aa18.86■□□□□ 0.61
GARNL3-217ENST00000481875 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
GARNL3-217ENST00000481875 DIP2CQ9Y2E4 1556 aa18.83■□□□□ 0.6
GARNL3-217ENST00000481875 ABCC1P33527 1531 aa18.83■□□□□ 0.6
GARNL3-217ENST00000481875 CDC42BPAQ5VT25 1732 aa18.83■□□□□ 0.6
GARNL3-217ENST00000481875 AGLP35573 1532 aa18.82■□□□□ 0.6
GARNL3-217ENST00000481875 PREX1Q8TCU6 1659 aa18.8■□□□□ 0.6
GARNL3-217ENST00000481875 ITSN2Q9NZM3 1697 aa18.8■□□□□ 0.6
GARNL3-217ENST00000481875 MLECQ14165 292 aa18.8■□□□□ 0.6
GARNL3-217ENST00000481875 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
GARNL3-217ENST00000481875 TRAPPC8Q9Y2L5 1435 aa18.79■□□□□ 0.6
GARNL3-217ENST00000481875 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
GARNL3-217ENST00000481875 HSPA2P54652 639 aa18.78■□□□□ 0.6
GARNL3-217ENST00000481875 KIDINS220Q9ULH0 1771 aa18.78■□□□□ 0.6
GARNL3-217ENST00000481875 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
GARNL3-217ENST00000481875 KIAA1107Q9UPP5 1409 aa18.74■□□□□ 0.59
GARNL3-217ENST00000481875 SAMD9LQ8IVG5 1584 aa18.72■□□□□ 0.59
GARNL3-217ENST00000481875 CEBPAP49715 358 aaPredicted RBP18.71■□□□□ 0.59
GARNL3-217ENST00000481875 C3P01024 1663 aa18.7■□□□□ 0.58
GARNL3-217ENST00000481875 CNTLNQ9NXG0 1405 aa18.7■□□□□ 0.58
GARNL3-217ENST00000481875 PLEKHH2Q8IVE3 1493 aa18.7■□□□□ 0.58
GARNL3-217ENST00000481875 STRCQ7RTU9 1775 aa18.69■□□□□ 0.58
GARNL3-217ENST00000481875 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
GARNL3-217ENST00000481875 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
GARNL3-217ENST00000481875 UHRF1BP1Q6BDS2 1440 aa18.68■□□□□ 0.58
GARNL3-217ENST00000481875 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
GARNL3-217ENST00000481875 MROH2AA6NES4 1674 aa18.66■□□□□ 0.58
GARNL3-217ENST00000481875 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
GARNL3-217ENST00000481875 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
GARNL3-217ENST00000481875 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
GARNL3-217ENST00000481875 ESF1Q9H501 851 aaKnown RBP18.63■□□□□ 0.57
GARNL3-217ENST00000481875 CCNB3Q8WWL7 1395 aa18.63■□□□□ 0.57
GARNL3-217ENST00000481875 NPATQ14207 1427 aa18.63■□□□□ 0.57
GARNL3-217ENST00000481875 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
GARNL3-217ENST00000481875 PLXNC1O60486 1568 aa18.63■□□□□ 0.57
GARNL3-217ENST00000481875 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
GARNL3-217ENST00000481875 HNRNPMP52272 730 aaKnown RBP eCLIP18.62■□□□□ 0.57
GARNL3-217ENST00000481875 MTUS2Q5JR59 1369 aa18.62■□□□□ 0.57
GARNL3-217ENST00000481875 PTPRTO14522 1441 aa18.61■□□□□ 0.57
GARNL3-217ENST00000481875 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
GARNL3-217ENST00000481875 EHBP1L1Q8N3D4 1523 aa18.59■□□□□ 0.57
GARNL3-217ENST00000481875 CEP162Q5TB80 1403 aa18.58■□□□□ 0.57
GARNL3-217ENST00000481875 A2MP01023 1474 aa18.58■□□□□ 0.56
GARNL3-217ENST00000481875 MBD5Q9P267 1494 aa18.58■□□□□ 0.56
GARNL3-217ENST00000481875 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
GARNL3-217ENST00000481875 SUPT6HQ7KZ85 1726 aaKnown RBP18.57■□□□□ 0.56
GARNL3-217ENST00000481875 ZMYM3Q14202 1370 aa18.57■□□□□ 0.56
GARNL3-217ENST00000481875 ADGBQ8N7X0 1667 aa18.57■□□□□ 0.56
GARNL3-217ENST00000481875 TIAM1Q13009 1591 aa18.57■□□□□ 0.56
GARNL3-217ENST00000481875 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
GARNL3-217ENST00000481875 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.56
GARNL3-217ENST00000481875 CLTCQ00610 1675 aaKnown RBP18.5■□□□□ 0.55
GARNL3-217ENST00000481875 ZNF644Q9H582 1327 aaPredicted RBP18.5■□□□□ 0.55
GARNL3-217ENST00000481875 ZNF142P52746 1687 aaPredicted RBP18.5■□□□□ 0.55
GARNL3-217ENST00000481875 PTPRKQ15262 1439 aa18.49■□□□□ 0.55
GARNL3-217ENST00000481875 IQSEC2Q5JU85 1478 aa18.48■□□□□ 0.55
GARNL3-217ENST00000481875 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
GARNL3-217ENST00000481875 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
GARNL3-217ENST00000481875 FAM135AQ9P2D6 1515 aa18.48■□□□□ 0.55
GARNL3-217ENST00000481875 PLA2R1Q13018 1463 aa18.47■□□□□ 0.55
GARNL3-217ENST00000481875 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
GARNL3-217ENST00000481875 CAMSAP1Q5T5Y3 1602 aa18.46■□□□□ 0.55
GARNL3-217ENST00000481875 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
GARNL3-217ENST00000481875 GGT6Q6P531 493 aa18.44■□□□□ 0.54
GARNL3-217ENST00000481875 CCDC141Q6ZP82 1450 aa18.44■□□□□ 0.54
GARNL3-217ENST00000481875 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
GARNL3-217ENST00000481875 PKD2Q13563 968 aa18.43■□□□□ 0.54
GARNL3-217ENST00000481875 CEP170BQ9Y4F5 1589 aaPredicted RBP18.42■□□□□ 0.54
GARNL3-217ENST00000481875 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
GARNL3-217ENST00000481875 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms