RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 MYOM3Q5VTT5 1437 aa32.03■■■□□ 2.72
VPS16-207ENST00000481812 PHLDB1Q86UU1 1377 aa32.02■■■□□ 2.72
VPS16-207ENST00000481812 CFAP74Q9C0B2 1584 aa32.01■■■□□ 2.71
VPS16-207ENST00000481812 MIA2Q96PC5 1412 aa32■■■□□ 2.71
VPS16-207ENST00000481812 EFCAB2Q5VUJ9 269 aa31.99■■■□□ 2.71
VPS16-207ENST00000481812 ARHGAP5Q13017 1502 aa31.99■■■□□ 2.71
VPS16-207ENST00000481812 NEO1Q92859 1461 aa31.98■■■□□ 2.71
VPS16-207ENST00000481812 FANCAO15360 1455 aa31.97■■■□□ 2.71
VPS16-207ENST00000481812 CFDP1Q9UEE9 299 aaPredicted RBP31.97■■■□□ 2.71
VPS16-207ENST00000481812 FGD6Q6ZV73 1430 aa31.91■■■□□ 2.7
VPS16-207ENST00000481812 AKNAQ7Z591 1439 aa31.89■■■□□ 2.7
VPS16-207ENST00000481812 SAMD9LQ8IVG5 1584 aa31.87■■■□□ 2.69
VPS16-207ENST00000481812 PLEKHH2Q8IVE3 1493 aa31.87■■■□□ 2.69
VPS16-207ENST00000481812 PTPN23Q9H3S7 1636 aa31.85■■■□□ 2.69
VPS16-207ENST00000481812 TCOF1Q13428 1488 aaKnown RBP31.84■■■□□ 2.69
VPS16-207ENST00000481812 KIAA1107Q9UPP5 1409 aa31.83■■■□□ 2.69
VPS16-207ENST00000481812 ABCC1P33527 1531 aa31.82■■■□□ 2.68
VPS16-207ENST00000481812 ZNF777Q9ULD5 760 aaPredicted RBP31.82■■■□□ 2.68
VPS16-207ENST00000481812 ADGRL1O94910 1474 aa31.81■■■□□ 2.68
VPS16-207ENST00000481812 CAMSAP2Q08AD1 1489 aa31.81■■■□□ 2.68
VPS16-207ENST00000481812 RRBP1Q9P2E9 1410 aaKnown RBP31.81■■■□□ 2.68
VPS16-207ENST00000481812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.78■■■□□ 2.68
VPS16-207ENST00000481812 ZNF644Q9H582 1327 aaPredicted RBP31.77■■■□□ 2.68
VPS16-207ENST00000481812 SCAPERQ9BY12 1400 aa31.76■■■□□ 2.68
VPS16-207ENST00000481812 DENND4BO75064 1496 aaPredicted RBP31.73■■■□□ 2.67
VPS16-207ENST00000481812 RSPH4AQ5TD94 716 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 SYCP2Q9BX26 1530 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 ARHGEF12Q9NZN5 1544 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 ARHGEF5Q12774 1597 aa31.73■■■□□ 2.67
VPS16-207ENST00000481812 MBD5Q9P267 1494 aa31.72■■■□□ 2.67
VPS16-207ENST00000481812 RICTORQ6R327 1708 aa31.69■■■□□ 2.66
VPS16-207ENST00000481812 KDM6BO15054 1643 aa31.68■■■□□ 2.66
VPS16-207ENST00000481812 COL17A1Q9UMD9 1497 aaPredicted RBP31.68■■■□□ 2.66
VPS16-207ENST00000481812 HNRNPMP52272 730 aaKnown RBP eCLIP31.68■■■□□ 2.66
VPS16-207ENST00000481812 POGZQ7Z3K3 1410 aa31.67■■■□□ 2.66
VPS16-207ENST00000481812 ZNF518AQ6AHZ1 1483 aa31.67■■■□□ 2.66
VPS16-207ENST00000481812 FAM50AQ14320 339 aaKnown RBP31.65■■■□□ 2.66
VPS16-207ENST00000481812 TRAPPC8Q9Y2L5 1435 aa31.65■■■□□ 2.66
VPS16-207ENST00000481812 CCDC141Q6ZP82 1450 aa31.64■■■□□ 2.66
VPS16-207ENST00000481812 DNMT1P26358 1616 aaKnown RBP31.64■■■□□ 2.65
VPS16-207ENST00000481812 KDM5CP41229 1560 aa31.62■■■□□ 2.65
VPS16-207ENST00000481812 FRMPD1Q5SYB0 1578 aa31.62■■■□□ 2.65
VPS16-207ENST00000481812 RAPGEF3O95398 923 aa31.6■■■□□ 2.65
VPS16-207ENST00000481812 ZMYM4Q5VZL5 1548 aa31.59■■■□□ 2.65
VPS16-207ENST00000481812 AFAP1Q8N556 730 aa31.58■■■□□ 2.65
VPS16-207ENST00000481812 ABCC5O15440 1437 aa31.58■■■□□ 2.65
VPS16-207ENST00000481812 DAPK1P53355 1430 aa31.58■■■□□ 2.65
VPS16-207ENST00000481812 CROCC2H7BZ55 1655 aa31.57■■■□□ 2.64
VPS16-207ENST00000481812 SHANK2Q9UPX8 1470 aa31.55■■■□□ 2.64
VPS16-207ENST00000481812 MAGI2Q86UL8 1455 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 MLH3Q9UHC1 1453 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 TSPY4P0CV99 314 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 TSPY10P0CW01 314 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 MAST1Q9Y2H9 1570 aa31.54■■■□□ 2.64
VPS16-207ENST00000481812 RTEL1-TNFRSF6BF6WH68 1400 aa31.53■■■□□ 2.64
VPS16-207ENST00000481812 HECW2Q9P2P5 1572 aa31.51■■■□□ 2.63
VPS16-207ENST00000481812 SPAG9O60271 1321 aaKnown RBP31.5■■■□□ 2.63
VPS16-207ENST00000481812 INO80Q9ULG1 1556 aaPredicted RBP31.49■■■□□ 2.63
VPS16-207ENST00000481812 KIDINS220Q9ULH0 1771 aa31.48■■■□□ 2.63
VPS16-207ENST00000481812 C9orf84Q5VXU9 1444 aa31.47■■■□□ 2.63
VPS16-207ENST00000481812 ATP7AQ04656 1500 aa31.46■■■□□ 2.63
VPS16-207ENST00000481812 ZFYVE16Q7Z3T8 1539 aa31.45■■■□□ 2.63
VPS16-207ENST00000481812 PTPRKQ15262 1439 aa31.43■■■□□ 2.62
VPS16-207ENST00000481812 ADGBQ8N7X0 1667 aa31.42■■■□□ 2.62
VPS16-207ENST00000481812 ADGRL2O95490 1459 aa31.42■■■□□ 2.62
VPS16-207ENST00000481812 TRIM26Q12899 539 aaPredicted RBP31.41■■■□□ 2.62
VPS16-207ENST00000481812 PLXNC1O60486 1568 aa31.4■■■□□ 2.62
VPS16-207ENST00000481812 ROCK1Q13464 1354 aa31.39■■■□□ 2.62
VPS16-207ENST00000481812 ITGAEP38570 1179 aa31.37■■■□□ 2.61
VPS16-207ENST00000481812 ANKRD30AQ9BXX3 1397 aa31.37■■■□□ 2.61
VPS16-207ENST00000481812 ARHGEF40Q8TER5 1519 aa31.37■■■□□ 2.61
VPS16-207ENST00000481812 NCOA1Q15788 1441 aa31.36■■■□□ 2.61
VPS16-207ENST00000481812 MYT1LQ9UL68 1186 aa31.36■■■□□ 2.61
VPS16-207ENST00000481812 ABCA6Q8N139 1617 aa31.35■■■□□ 2.61
VPS16-207ENST00000481812 DIP2CQ9Y2E4 1556 aa31.35■■■□□ 2.61
VPS16-207ENST00000481812 YEATS2Q9ULM3 1422 aa31.35■■■□□ 2.61
VPS16-207ENST00000481812 CHIC2Q9UKJ5 165 aa31.34■■■□□ 2.61
VPS16-207ENST00000481812 ATP10AO60312 1499 aa31.32■■■□□ 2.6
VPS16-207ENST00000481812 REREQ9P2R6 1566 aa31.31■■■□□ 2.6
VPS16-207ENST00000481812 DUOX2Q9NRD8 1548 aa31.27■■■□□ 2.6
VPS16-207ENST00000481812 KIF15Q9NS87 1388 aa31.27■■■□□ 2.6
VPS16-207ENST00000481812 DHX29Q7Z478 1369 aaKnown RBP31.25■■■□□ 2.59
VPS16-207ENST00000481812 A2MP01023 1474 aa31.25■■■□□ 2.59
VPS16-207ENST00000481812 RRP7BPQ9NSQ0 103 aa31.24■■■□□ 2.59
VPS16-207ENST00000481812 HFM1A2PYH4 1435 aa31.21■■■□□ 2.59
VPS16-207ENST00000481812 GCC2Q8IWJ2 1684 aa31.2■■■□□ 2.59
VPS16-207ENST00000481812 AGLP35573 1532 aa31.19■■■□□ 2.58
VPS16-207ENST00000481812 ERBINQ96RT1 1412 aa31.19■■■□□ 2.58
VPS16-207ENST00000481812 NAIPQ13075 1403 aa31.18■■■□□ 2.58
VPS16-207ENST00000481812 EIF2AK4Q9P2K8 1649 aaKnown RBP31.16■■■□□ 2.58
VPS16-207ENST00000481812 BCORL1Q5H9F3 1711 aa31.16■■■□□ 2.58
VPS16-207ENST00000481812 ANKRD50Q9ULJ7 1429 aa31.15■■■□□ 2.58
VPS16-207ENST00000481812 SIGLEC1Q9BZZ2 1709 aa31.12■■■□□ 2.57
VPS16-207ENST00000481812 SETD5Q9C0A6 1442 aa31.07■■■□□ 2.57
VPS16-207ENST00000481812 KIF3BO15066 747 aa31.04■■■□□ 2.56
VPS16-207ENST00000481812 RNF17Q9BXT8 1623 aaKnown RBP31.04■■■□□ 2.56
VPS16-207ENST00000481812 ACIN1Q9UKV3 1341 aaKnown RBP31.03■■■□□ 2.56
VPS16-207ENST00000481812 DEPDC5O75140 1603 aa31.02■■■□□ 2.56
VPS16-207ENST00000481812 HRCP23327 699 aa31.01■■■□□ 2.55
VPS16-207ENST00000481812 ARID4BQ4LE39 1312 aaPredicted RBP31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms