RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 FYCO1Q9BQS8 1478 aa36.03■■■■□ 3.36
GPCPD1-206ENST00000481690 ARHGAP5Q13017 1502 aa36.01■■■■□ 3.36
GPCPD1-206ENST00000481690 ZFYVE16Q7Z3T8 1539 aa36.01■■■■□ 3.36
GPCPD1-206ENST00000481690 EFCAB2Q5VUJ9 269 aa36■■■■□ 3.35
GPCPD1-206ENST00000481690 POGZQ7Z3K3 1410 aa36■■■■□ 3.35
GPCPD1-206ENST00000481690 HECW2Q9P2P5 1572 aa35.99■■■■□ 3.35
GPCPD1-206ENST00000481690 CDC42BPBQ9Y5S2 1711 aa35.94■■■■□ 3.34
GPCPD1-206ENST00000481690 YEATS2Q9ULM3 1422 aa35.94■■■■□ 3.34
GPCPD1-206ENST00000481690 MADDQ8WXG6 1647 aa35.94■■■■□ 3.34
GPCPD1-206ENST00000481690 MAGI2Q86UL8 1455 aa35.92■■■■□ 3.34
GPCPD1-206ENST00000481690 PREX2Q70Z35 1606 aa35.91■■■■□ 3.34
GPCPD1-206ENST00000481690 PTPRMP28827 1452 aa35.9■■■■□ 3.34
GPCPD1-206ENST00000481690 SIGLEC1Q9BZZ2 1709 aa35.88■■■■□ 3.34
GPCPD1-206ENST00000481690 RIMS1Q86UR5 1692 aaKnown RBP35.85■■■■□ 3.33
GPCPD1-206ENST00000481690 CDC42BPAQ5VT25 1732 aa35.85■■■■□ 3.33
GPCPD1-206ENST00000481690 ZNF518AQ6AHZ1 1483 aa35.83■■■■□ 3.33
GPCPD1-206ENST00000481690 KDM5CP41229 1560 aa35.78■■■■□ 3.32
GPCPD1-206ENST00000481690 CEP162Q5TB80 1403 aa35.78■■■■□ 3.32
GPCPD1-206ENST00000481690 ITSN2Q9NZM3 1697 aa35.76■■■■□ 3.32
GPCPD1-206ENST00000481690 ABCC1P33527 1531 aa35.76■■■■□ 3.31
GPCPD1-206ENST00000481690 ATP10AO60312 1499 aa35.75■■■■□ 3.31
GPCPD1-206ENST00000481690 AFAP1Q8N556 730 aa35.74■■■■□ 3.31
GPCPD1-206ENST00000481690 MYT1LQ9UL68 1186 aa35.74■■■■□ 3.31
GPCPD1-206ENST00000481690 C9orf84Q5VXU9 1444 aa35.74■■■■□ 3.31
GPCPD1-206ENST00000481690 FER1L4A9Z1Z3 1794 aa35.72■■■■□ 3.31
GPCPD1-206ENST00000481690 MLECQ14165 292 aa35.72■■■■□ 3.31
GPCPD1-206ENST00000481690 ARHGEF12Q9NZN5 1544 aa35.67■■■■□ 3.3
GPCPD1-206ENST00000481690 MTUS2Q5JR59 1369 aa35.66■■■■□ 3.3
GPCPD1-206ENST00000481690 DIP2CQ9Y2E4 1556 aa35.66■■■■□ 3.3
GPCPD1-206ENST00000481690 TRAPPC8Q9Y2L5 1435 aa35.66■■■■□ 3.3
GPCPD1-206ENST00000481690 PLPPR3Q6T4P5 718 aa35.65■■■■□ 3.3
GPCPD1-206ENST00000481690 ZNF777Q9ULD5 760 aaPredicted RBP35.64■■■■□ 3.3
GPCPD1-206ENST00000481690 ABCA6Q8N139 1617 aa35.64■■■■□ 3.3
GPCPD1-206ENST00000481690 SAMD9LQ8IVG5 1584 aa35.64■■■■□ 3.3
GPCPD1-206ENST00000481690 GPATCH8Q9UKJ3 1502 aaKnown RBP35.63■■■■□ 3.29
GPCPD1-206ENST00000481690 MLH3Q9UHC1 1453 aa35.6■■■■□ 3.29
GPCPD1-206ENST00000481690 SYCP2Q9BX26 1530 aa35.58■■■■□ 3.29
GPCPD1-206ENST00000481690 CCNB3Q8WWL7 1395 aa35.58■■■■□ 3.29
GPCPD1-206ENST00000481690 EHBP1L1Q8N3D4 1523 aa35.57■■■■□ 3.29
GPCPD1-206ENST00000481690 KIDINS220Q9ULH0 1771 aa35.55■■■■□ 3.28
GPCPD1-206ENST00000481690 REREQ9P2R6 1566 aa35.55■■■■□ 3.28
GPCPD1-206ENST00000481690 LOC105371045A0A1W2PR82 267 aa35.53■■■■□ 3.28
GPCPD1-206ENST00000481690 CFDP1Q9UEE9 299 aaPredicted RBP35.52■■■■□ 3.28
GPCPD1-206ENST00000481690 LMTK3Q96Q04 1460 aa35.51■■■■□ 3.28
GPCPD1-206ENST00000481690 TIAM1Q13009 1591 aa35.5■■■■□ 3.27
GPCPD1-206ENST00000481690 PLEKHH2Q8IVE3 1493 aa35.47■■■■□ 3.27
GPCPD1-206ENST00000481690 HNRNPMP52272 730 aaKnown RBP eCLIP35.46■■■■□ 3.27
GPCPD1-206ENST00000481690 AGLP35573 1532 aa35.42■■■■□ 3.26
GPCPD1-206ENST00000481690 KIAA1107Q9UPP5 1409 aa35.41■■■■□ 3.26
GPCPD1-206ENST00000481690 SUPT6HQ7KZ85 1726 aaKnown RBP35.41■■■■□ 3.26
GPCPD1-206ENST00000481690 SPAG9O60271 1321 aaKnown RBP35.4■■■■□ 3.26
GPCPD1-206ENST00000481690 VPS8Q8N3P4 1428 aa35.39■■■■□ 3.26
GPCPD1-206ENST00000481690 ATP7AQ04656 1500 aa35.38■■■■□ 3.25
GPCPD1-206ENST00000481690 INO80Q9ULG1 1556 aaPredicted RBP35.37■■■■□ 3.25
GPCPD1-206ENST00000481690 CEBPAP49715 358 aaPredicted RBP35.34■■■■□ 3.25
GPCPD1-206ENST00000481690 PREX1Q8TCU6 1659 aa35.33■■■■□ 3.25
GPCPD1-206ENST00000481690 HSPA2P54652 639 aa35.33■■■■□ 3.25
GPCPD1-206ENST00000481690 ZNF644Q9H582 1327 aaPredicted RBP35.32■■■■□ 3.25
GPCPD1-206ENST00000481690 NCOA2Q15596 1464 aa35.32■■■■□ 3.24
GPCPD1-206ENST00000481690 ESF1Q9H501 851 aaKnown RBP35.3■■■■□ 3.24
GPCPD1-206ENST00000481690 C3P01024 1663 aa35.3■■■■□ 3.24
GPCPD1-206ENST00000481690 ILDR1Q86SU0 546 aaPredicted RBP35.28■■■■□ 3.24
GPCPD1-206ENST00000481690 ADGBQ8N7X0 1667 aa35.24■■■■□ 3.23
GPCPD1-206ENST00000481690 MBD5Q9P267 1494 aa35.23■■■■□ 3.23
GPCPD1-206ENST00000481690 A2MP01023 1474 aa35.22■■■■□ 3.23
GPCPD1-206ENST00000481690 PLXNC1O60486 1568 aa35.22■■■■□ 3.23
GPCPD1-206ENST00000481690 CAMSAP2Q08AD1 1489 aa35.22■■■■□ 3.23
GPCPD1-206ENST00000481690 LRRC9Q6ZRR7 1453 aa35.22■■■■□ 3.23
GPCPD1-206ENST00000481690 SETD1BQ9UPS6 1966 aaKnown RBP35.2■■■■□ 3.23
GPCPD1-206ENST00000481690 CNTLNQ9NXG0 1405 aa35.18■■■■□ 3.22
GPCPD1-206ENST00000481690 UHRF1BP1Q6BDS2 1440 aa35.15■■■■□ 3.22
GPCPD1-206ENST00000481690 MROH2AA6NES4 1674 aa35.15■■■■□ 3.22
GPCPD1-206ENST00000481690 CCDC141Q6ZP82 1450 aa35.14■■■■□ 3.22
GPCPD1-206ENST00000481690 CLTCQ00610 1675 aaKnown RBP35.13■■■■□ 3.21
GPCPD1-206ENST00000481690 MAP3K1Q13233 1512 aa35.12■■■■□ 3.21
GPCPD1-206ENST00000481690 RTEL1-TNFRSF6BF6WH68 1400 aa35.11■■■■□ 3.21
GPCPD1-206ENST00000481690 KANK4Q5T7N3 995 aaPredicted RBP35.08■■■■□ 3.21
GPCPD1-206ENST00000481690 GGT6Q6P531 493 aa35.06■■■■□ 3.2
GPCPD1-206ENST00000481690 ARHGEF5Q12774 1597 aa35.04■■■■□ 3.2
GPCPD1-206ENST00000481690 RSPH4AQ5TD94 716 aa35.02■■■■□ 3.2
GPCPD1-206ENST00000481690 ZMYM3Q14202 1370 aa35.01■■■■□ 3.2
GPCPD1-206ENST00000481690 STRCQ7RTU9 1775 aa35.01■■■■□ 3.2
GPCPD1-206ENST00000481690 DHX29Q7Z478 1369 aaKnown RBP34.99■■■■□ 3.19
GPCPD1-206ENST00000481690 NPATQ14207 1427 aa34.97■■■■□ 3.19
GPCPD1-206ENST00000481690 APLP2Q06481 763 aa34.96■■■■□ 3.19
GPCPD1-206ENST00000481690 MYOM3Q5VTT5 1437 aa34.96■■■■□ 3.19
GPCPD1-206ENST00000481690 TSPY4P0CV99 314 aa34.94■■■■□ 3.18
GPCPD1-206ENST00000481690 TSPY10P0CW01 314 aa34.94■■■■□ 3.18
GPCPD1-206ENST00000481690 MIA2Q96PC5 1412 aa34.91■■■■□ 3.18
GPCPD1-206ENST00000481690 KIF3BO15066 747 aa34.9■■■■□ 3.18
GPCPD1-206ENST00000481690 FBXO41Q8TF61 875 aa34.9■■■■□ 3.18
GPCPD1-206ENST00000481690 MYO3AQ8NEV4 1616 aa34.89■■■■□ 3.18
GPCPD1-206ENST00000481690 PPP6R1Q9UPN7 881 aa34.89■■■■□ 3.18
GPCPD1-206ENST00000481690 MAST1Q9Y2H9 1570 aa34.87■■■■□ 3.17
GPCPD1-206ENST00000481690 PTPRKQ15262 1439 aa34.86■■■■□ 3.17
GPCPD1-206ENST00000481690 DMRT2Q9Y5R5 561 aa34.85■■■■□ 3.17
GPCPD1-206ENST00000481690 ZNF142P52746 1687 aaPredicted RBP34.83■■■■□ 3.17
GPCPD1-206ENST00000481690 KDM5DQ9BY66 1539 aa34.82■■■■□ 3.16
GPCPD1-206ENST00000481690 CAMSAP1Q5T5Y3 1602 aa34.81■■■■□ 3.16
GPCPD1-206ENST00000481690 PTPN23Q9H3S7 1636 aa34.8■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms