RNA–Protein interactions for RNA: ENST00000481652.1

PHTF1-210, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 836 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-210ENST00000481652 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
PHTF1-210ENST00000481652 STK25O00506 426 aa11.29□□□□□ -0.6
PHTF1-210ENST00000481652 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
PHTF1-210ENST00000481652 ERCC6Q03468 1493 aa11.29□□□□□ -0.6
PHTF1-210ENST00000481652 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
PHTF1-210ENST00000481652 STK24Q9Y6E0 443 aa11.27□□□□□ -0.61
PHTF1-210ENST00000481652 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
PHTF1-210ENST00000481652 DCAF8L2P0C7V8 631 aa11.25□□□□□ -0.61
PHTF1-210ENST00000481652 TMEM92Q6UXU6 159 aa11.25□□□□□ -0.61
PHTF1-210ENST00000481652 EMP3P54852 163 aa11.24□□□□□ -0.61
PHTF1-210ENST00000481652 HS3ST6Q96QI5 342 aa11.24□□□□□ -0.61
PHTF1-210ENST00000481652 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
PHTF1-210ENST00000481652 SOX12O15370 315 aa11.21□□□□□ -0.61
PHTF1-210ENST00000481652 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
PHTF1-210ENST00000481652 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
PHTF1-210ENST00000481652 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
PHTF1-210ENST00000481652 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
PHTF1-210ENST00000481652 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
PHTF1-210ENST00000481652 NLRP6P59044 892 aa11.14□□□□□ -0.63
PHTF1-210ENST00000481652 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
PHTF1-210ENST00000481652 G3V3G9 751 aa11.13□□□□□ -0.63
PHTF1-210ENST00000481652 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
PHTF1-210ENST00000481652 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
PHTF1-210ENST00000481652 SHROOM4Q9ULL8 1493 aa11.1□□□□□ -0.63
PHTF1-210ENST00000481652 GPR153Q6NV75 609 aa11.09□□□□□ -0.63
PHTF1-210ENST00000481652 MYT1Q01538 1121 aa11.08□□□□□ -0.64
PHTF1-210ENST00000481652 MFRPQ9BY79 579 aa11.06□□□□□ -0.64
PHTF1-210ENST00000481652 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
PHTF1-210ENST00000481652 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
PHTF1-210ENST00000481652 KIF3CO14782 793 aa11.03□□□□□ -0.64
PHTF1-210ENST00000481652 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
PHTF1-210ENST00000481652 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
PHTF1-210ENST00000481652 ERBB3P21860 1342 aa10.99□□□□□ -0.65
PHTF1-210ENST00000481652 RIMBP2O15034 1052 aa10.97□□□□□ -0.65
PHTF1-210ENST00000481652 ZNF687Q8N1G0 1237 aa10.97□□□□□ -0.65
PHTF1-210ENST00000481652 NKX1-1Q15270 411 aaPredicted RBP10.96□□□□□ -0.65
PHTF1-210ENST00000481652 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
PHTF1-210ENST00000481652 RIMBP3CA6NJZ7 1639 aa10.94□□□□□ -0.66
PHTF1-210ENST00000481652 RIMBP3BA6NNM3 1639 aa10.94□□□□□ -0.66
PHTF1-210ENST00000481652 RIMBP3Q9UFD9 1639 aa10.94□□□□□ -0.66
PHTF1-210ENST00000481652 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
PHTF1-210ENST00000481652 ARSIQ5FYB1 569 aa10.91□□□□□ -0.66
PHTF1-210ENST00000481652 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
PHTF1-210ENST00000481652 THOC2Q8NI27 1593 aaKnown RBP10.9□□□□□ -0.66
PHTF1-210ENST00000481652 C2orf72A6NCS6 295 aa10.89□□□□□ -0.67
PHTF1-210ENST00000481652 BAZ1AQ9NRL2 1556 aaPredicted RBP10.87□□□□□ -0.67
PHTF1-210ENST00000481652 GTPBP6O43824 516 aaPredicted RBP10.87□□□□□ -0.67
PHTF1-210ENST00000481652 PPP1R37O75864 691 aa10.87□□□□□ -0.67
PHTF1-210ENST00000481652 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
PHTF1-210ENST00000481652 SLC34A2O95436 690 aa10.86□□□□□ -0.67
PHTF1-210ENST00000481652 TTBK1Q5TCY1 1321 aaPredicted RBP10.85□□□□□ -0.67
PHTF1-210ENST00000481652 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
PHTF1-210ENST00000481652 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
PHTF1-210ENST00000481652 NESP48681 1621 aa10.83□□□□□ -0.68
PHTF1-210ENST00000481652 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
PHTF1-210ENST00000481652 RNF166Q96A37 237 aaPredicted RBP10.82□□□□□ -0.68
PHTF1-210ENST00000481652 CYB5RLQ6IPT4 315 aa10.81□□□□□ -0.68
PHTF1-210ENST00000481652 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
PHTF1-210ENST00000481652 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
PHTF1-210ENST00000481652 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
PHTF1-210ENST00000481652 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
PHTF1-210ENST00000481652 NUDT7P0C024 238 aa10.76□□□□□ -0.69
PHTF1-210ENST00000481652 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
PHTF1-210ENST00000481652 PAXIP1Q6ZW49 1069 aaPredicted RBP10.76□□□□□ -0.69
PHTF1-210ENST00000481652 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
PHTF1-210ENST00000481652 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
PHTF1-210ENST00000481652 ARHGEF11O15085 1522 aa10.75□□□□□ -0.69
PHTF1-210ENST00000481652 SMARCA2P51531 1590 aa10.75□□□□□ -0.69
PHTF1-210ENST00000481652 PTGER2P43116 358 aa10.75□□□□□ -0.69
PHTF1-210ENST00000481652 LHX6Q9UPM6 363 aa10.74□□□□□ -0.69
PHTF1-210ENST00000481652 LMTK3Q96Q04 1460 aa10.72□□□□□ -0.69
PHTF1-210ENST00000481652 PBX2P40425 430 aa10.71□□□□□ -0.69
PHTF1-210ENST00000481652 PTCD2Q8WV60 388 aaKnown RBP10.71□□□□□ -0.69
PHTF1-210ENST00000481652 SOCS7O14512 581 aa10.7□□□□□ -0.7
PHTF1-210ENST00000481652 GPHNQ9NQX3 736 aaPredicted RBP10.7□□□□□ -0.7
PHTF1-210ENST00000481652 PDE4AP27815 886 aa10.69□□□□□ -0.7
PHTF1-210ENST00000481652 FOXK1P85037 733 aa10.68□□□□□ -0.7
PHTF1-210ENST00000481652 ANKRD13DQ6ZTN6 518 aa10.67□□□□□ -0.7
PHTF1-210ENST00000481652 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
PHTF1-210ENST00000481652 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
PHTF1-210ENST00000481652 KIF21AQ7Z4S6 1674 aa10.63□□□□□ -0.71
PHTF1-210ENST00000481652 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
PHTF1-210ENST00000481652 DSG2Q14126 1118 aa10.62□□□□□ -0.71
PHTF1-210ENST00000481652 PLPP6Q8IY26 295 aa10.62□□□□□ -0.71
PHTF1-210ENST00000481652 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
PHTF1-210ENST00000481652 NCKAP5LQ9HCH0 1330 aa10.61□□□□□ -0.71
PHTF1-210ENST00000481652 ILDR2Q71H61 639 aa10.61□□□□□ -0.71
PHTF1-210ENST00000481652 FBXO41Q8TF61 875 aa10.6□□□□□ -0.71
PHTF1-210ENST00000481652 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
PHTF1-210ENST00000481652 HRO43593 1189 aa10.59□□□□□ -0.71
PHTF1-210ENST00000481652 PPP1R15BQ5SWA1 713 aa10.59□□□□□ -0.71
PHTF1-210ENST00000481652 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
PHTF1-210ENST00000481652 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
PHTF1-210ENST00000481652 ARAP1Q96P48 1450 aa10.57□□□□□ -0.72
PHTF1-210ENST00000481652 PSDA5PKW4 1024 aaPredicted RBP10.57□□□□□ -0.72
PHTF1-210ENST00000481652 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
PHTF1-210ENST00000481652 MFSD10Q14728 455 aa10.56□□□□□ -0.72
PHTF1-210ENST00000481652 TK2O00142 265 aa10.55□□□□□ -0.72
PHTF1-210ENST00000481652 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
PHTF1-210ENST00000481652 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms