RNA–Protein interactions for RNA: ENST00000481368.5

SNHG12-209, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-209ENST00000481368 ARHGEF40Q8TER5 1519 aa23.28■■□□□ 1.32
SNHG12-209ENST00000481368 ARHGAP5Q13017 1502 aa23.27■■□□□ 1.32
SNHG12-209ENST00000481368 PREX2Q70Z35 1606 aa23.27■■□□□ 1.32
SNHG12-209ENST00000481368 POGZQ7Z3K3 1410 aa23.26■■□□□ 1.31
SNHG12-209ENST00000481368 CDC42BPAQ5VT25 1732 aa23.26■■□□□ 1.31
SNHG12-209ENST00000481368 EFCAB2Q5VUJ9 269 aa23.26■■□□□ 1.31
SNHG12-209ENST00000481368 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
SNHG12-209ENST00000481368 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
SNHG12-209ENST00000481368 ADAMTSL3P82987 1691 aa23.21■■□□□ 1.31
SNHG12-209ENST00000481368 ZFYVE16Q7Z3T8 1539 aa23.2■■□□□ 1.3
SNHG12-209ENST00000481368 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
SNHG12-209ENST00000481368 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
SNHG12-209ENST00000481368 MAGI2Q86UL8 1455 aa23.18■■□□□ 1.3
SNHG12-209ENST00000481368 ABCC1P33527 1531 aa23.17■■□□□ 1.3
SNHG12-209ENST00000481368 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
SNHG12-209ENST00000481368 KDM5CP41229 1560 aa23.17■■□□□ 1.3
SNHG12-209ENST00000481368 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
SNHG12-209ENST00000481368 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
SNHG12-209ENST00000481368 ITSN2Q9NZM3 1697 aa23.14■■□□□ 1.29
SNHG12-209ENST00000481368 MTUS2Q5JR59 1369 aa23.13■■□□□ 1.29
SNHG12-209ENST00000481368 TRAPPC8Q9Y2L5 1435 aa23.13■■□□□ 1.29
SNHG12-209ENST00000481368 SAMD9LQ8IVG5 1584 aa23.13■■□□□ 1.29
SNHG12-209ENST00000481368 MADDQ8WXG6 1647 aa23.13■■□□□ 1.29
SNHG12-209ENST00000481368 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
SNHG12-209ENST00000481368 EHBP1L1Q8N3D4 1523 aa23.1■■□□□ 1.29
SNHG12-209ENST00000481368 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
SNHG12-209ENST00000481368 HECW2Q9P2P5 1572 aa23.09■■□□□ 1.29
SNHG12-209ENST00000481368 TIAM1Q13009 1591 aa23.08■■□□□ 1.29
SNHG12-209ENST00000481368 PTPRMP28827 1452 aa23.08■■□□□ 1.28
SNHG12-209ENST00000481368 ATP10AO60312 1499 aa23.07■■□□□ 1.28
SNHG12-209ENST00000481368 DIP2CQ9Y2E4 1556 aa23.06■■□□□ 1.28
SNHG12-209ENST00000481368 ABCA6Q8N139 1617 aa23.06■■□□□ 1.28
SNHG12-209ENST00000481368 ZNF777Q9ULD5 760 aaPredicted RBP23.06■■□□□ 1.28
SNHG12-209ENST00000481368 CCNB3Q8WWL7 1395 aa23.05■■□□□ 1.28
SNHG12-209ENST00000481368 SYCP2Q9BX26 1530 aa23.05■■□□□ 1.28
SNHG12-209ENST00000481368 C9orf84Q5VXU9 1444 aa23.05■■□□□ 1.28
SNHG12-209ENST00000481368 MLH3Q9UHC1 1453 aa23.04■■□□□ 1.28
SNHG12-209ENST00000481368 RIMS1Q86UR5 1692 aaKnown RBP23.03■■□□□ 1.28
SNHG12-209ENST00000481368 KIDINS220Q9ULH0 1771 aa23.03■■□□□ 1.28
SNHG12-209ENST00000481368 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
SNHG12-209ENST00000481368 HNRNPMP52272 730 aaKnown RBP eCLIP23■■□□□ 1.27
SNHG12-209ENST00000481368 MLECQ14165 292 aa22.99■■□□□ 1.27
SNHG12-209ENST00000481368 ZNF644Q9H582 1327 aaPredicted RBP22.99■■□□□ 1.27
SNHG12-209ENST00000481368 NCOA2Q15596 1464 aa22.99■■□□□ 1.27
SNHG12-209ENST00000481368 SUPT6HQ7KZ85 1726 aaKnown RBP22.98■■□□□ 1.27
SNHG12-209ENST00000481368 REREQ9P2R6 1566 aa22.98■■□□□ 1.27
SNHG12-209ENST00000481368 KIAA1107Q9UPP5 1409 aa22.98■■□□□ 1.27
SNHG12-209ENST00000481368 FER1L4A9Z1Z3 1794 aa22.97■■□□□ 1.27
SNHG12-209ENST00000481368 LRRC9Q6ZRR7 1453 aa22.96■■□□□ 1.27
SNHG12-209ENST00000481368 MYT1LQ9UL68 1186 aa22.95■■□□□ 1.26
SNHG12-209ENST00000481368 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
SNHG12-209ENST00000481368 PLEKHH2Q8IVE3 1493 aa22.94■■□□□ 1.26
SNHG12-209ENST00000481368 MBD5Q9P267 1494 aa22.93■■□□□ 1.26
SNHG12-209ENST00000481368 MAP3K1Q13233 1512 aa22.92■■□□□ 1.26
SNHG12-209ENST00000481368 INO80Q9ULG1 1556 aaPredicted RBP22.92■■□□□ 1.26
SNHG12-209ENST00000481368 AGLP35573 1532 aa22.9■■□□□ 1.26
SNHG12-209ENST00000481368 ATP7AQ04656 1500 aa22.9■■□□□ 1.26
SNHG12-209ENST00000481368 SPAG9O60271 1321 aaKnown RBP22.89■■□□□ 1.25
SNHG12-209ENST00000481368 CAMSAP2Q08AD1 1489 aa22.86■■□□□ 1.25
SNHG12-209ENST00000481368 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
SNHG12-209ENST00000481368 LMTK3Q96Q04 1460 aa22.85■■□□□ 1.25
SNHG12-209ENST00000481368 PLXNC1O60486 1568 aa22.83■■□□□ 1.25
SNHG12-209ENST00000481368 CEBPAP49715 358 aaPredicted RBP22.8■■□□□ 1.24
SNHG12-209ENST00000481368 A2MP01023 1474 aa22.78■■□□□ 1.24
SNHG12-209ENST00000481368 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
SNHG12-209ENST00000481368 ADGBQ8N7X0 1667 aa22.77■■□□□ 1.24
SNHG12-209ENST00000481368 C3P01024 1663 aa22.76■■□□□ 1.23
SNHG12-209ENST00000481368 RTEL1-TNFRSF6BF6WH68 1400 aa22.76■■□□□ 1.23
SNHG12-209ENST00000481368 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
SNHG12-209ENST00000481368 MYOM3Q5VTT5 1437 aa22.75■■□□□ 1.23
SNHG12-209ENST00000481368 HSPA2P54652 639 aa22.71■■□□□ 1.23
SNHG12-209ENST00000481368 MIA2Q96PC5 1412 aa22.71■■□□□ 1.23
SNHG12-209ENST00000481368 PREX1Q8TCU6 1659 aa22.69■■□□□ 1.22
SNHG12-209ENST00000481368 RSPH4AQ5TD94 716 aa22.68■■□□□ 1.22
SNHG12-209ENST00000481368 SETD1BQ9UPS6 1966 aaKnown RBP22.68■■□□□ 1.22
SNHG12-209ENST00000481368 APLP2Q06481 763 aa22.67■■□□□ 1.22
SNHG12-209ENST00000481368 CLTCQ00610 1675 aaKnown RBP22.67■■□□□ 1.22
SNHG12-209ENST00000481368 DHX29Q7Z478 1369 aaKnown RBP22.67■■□□□ 1.22
SNHG12-209ENST00000481368 MROH2AA6NES4 1674 aa22.66■■□□□ 1.22
SNHG12-209ENST00000481368 CNTLNQ9NXG0 1405 aa22.66■■□□□ 1.22
SNHG12-209ENST00000481368 GGT6Q6P531 493 aa22.64■■□□□ 1.22
SNHG12-209ENST00000481368 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.22
SNHG12-209ENST00000481368 PTPN23Q9H3S7 1636 aa22.64■■□□□ 1.21
SNHG12-209ENST00000481368 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
SNHG12-209ENST00000481368 ZMYM3Q14202 1370 aa22.62■■□□□ 1.21
SNHG12-209ENST00000481368 TSPY4P0CV99 314 aa22.61■■□□□ 1.21
SNHG12-209ENST00000481368 TSPY10P0CW01 314 aa22.61■■□□□ 1.21
SNHG12-209ENST00000481368 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
SNHG12-209ENST00000481368 CROCC2H7BZ55 1655 aa22.58■■□□□ 1.21
SNHG12-209ENST00000481368 TCOF1Q13428 1488 aaKnown RBP22.58■■□□□ 1.21
SNHG12-209ENST00000481368 KIF3BO15066 747 aa22.58■■□□□ 1.2
SNHG12-209ENST00000481368 UHRF1BP1Q6BDS2 1440 aa22.58■■□□□ 1.2
SNHG12-209ENST00000481368 ABCC5O15440 1437 aa22.57■■□□□ 1.2
SNHG12-209ENST00000481368 STRCQ7RTU9 1775 aa22.55■■□□□ 1.2
SNHG12-209ENST00000481368 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
SNHG12-209ENST00000481368 NPATQ14207 1427 aa22.54■■□□□ 1.2
SNHG12-209ENST00000481368 PTPRKQ15262 1439 aa22.54■■□□□ 1.2
SNHG12-209ENST00000481368 PPP6R1Q9UPN7 881 aa22.54■■□□□ 1.2
SNHG12-209ENST00000481368 DAPK1P53355 1430 aa22.52■■□□□ 1.2
SNHG12-209ENST00000481368 SHANK2Q9UPX8 1470 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms