RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 UGGT2Q9NYU1 1516 aa7.95□□□□□ -1.14
RTN1-206ENST00000481205 NUP160Q12769 1436 aa7.95□□□□□ -1.14
RTN1-206ENST00000481205 ATXN8OSP0DMR3 200 aa7.94□□□□□ -1.14
RTN1-206ENST00000481205 CHGAP10645 457 aaKnown RBP7.94□□□□□ -1.14
RTN1-206ENST00000481205 PHLDB1Q86UU1 1377 aa7.94□□□□□ -1.14
RTN1-206ENST00000481205 ARID3CA6NKF2 412 aa7.94□□□□□ -1.14
RTN1-206ENST00000481205 SYNJ2O15056 1496 aa7.94□□□□□ -1.14
RTN1-206ENST00000481205 LRRC9Q6ZRR7 1453 aa7.93□□□□□ -1.14
RTN1-206ENST00000481205 RRBP1Q9P2E9 1410 aaKnown RBP7.93□□□□□ -1.14
RTN1-206ENST00000481205 CCNB3Q8WWL7 1395 aa7.92□□□□□ -1.14
RTN1-206ENST00000481205 SALL2Q9Y467 1007 aaPredicted RBP7.92□□□□□ -1.14
RTN1-206ENST00000481205 GRIN2AQ12879 1464 aa7.92□□□□□ -1.14
RTN1-206ENST00000481205 SNAPC4Q5SXM2 1469 aa7.92□□□□□ -1.14
RTN1-206ENST00000481205 CCDC136Q96JN2 1154 aa7.92□□□□□ -1.14
RTN1-206ENST00000481205 MKRN4PQ13434 485 aaPredicted RBP7.91□□□□□ -1.14
RTN1-206ENST00000481205 LRRIQ1Q96JM4 1722 aa7.91□□□□□ -1.14
RTN1-206ENST00000481205 CFAP43Q8NDM7 1665 aa7.9□□□□□ -1.14
RTN1-206ENST00000481205 CASKIN1Q8WXD9 1431 aa7.9□□□□□ -1.14
RTN1-206ENST00000481205 IQGAP2Q13576 1575 aa7.9□□□□□ -1.14
RTN1-206ENST00000481205 FAM50AQ14320 339 aaKnown RBP7.9□□□□□ -1.14
RTN1-206ENST00000481205 MAP3K1Q13233 1512 aa7.9□□□□□ -1.15
RTN1-206ENST00000481205 SPRYD3Q8NCJ5 442 aa7.89□□□□□ -1.15
RTN1-206ENST00000481205 CLSPNQ9HAW4 1339 aa7.89□□□□□ -1.15
RTN1-206ENST00000481205 FYCO1Q9BQS8 1478 aa7.89□□□□□ -1.15
RTN1-206ENST00000481205 NEFLP07196 543 aa7.88□□□□□ -1.15
RTN1-206ENST00000481205 FMN1Q68DA7 1419 aa7.88□□□□□ -1.15
RTN1-206ENST00000481205 ARID3AQ99856 593 aa7.88□□□□□ -1.15
RTN1-206ENST00000481205 KIAA0556O60303 1618 aa7.87□□□□□ -1.15
RTN1-206ENST00000481205 DHX57Q6P158 1386 aaKnown RBP7.87□□□□□ -1.15
RTN1-206ENST00000481205 PDIA4P13667 645 aaKnown RBP7.87□□□□□ -1.15
RTN1-206ENST00000481205 FBXO3Q9UK99 471 aa7.87□□□□□ -1.15
RTN1-206ENST00000481205 KIAA0586Q9BVV6 1533 aa7.87□□□□□ -1.15
RTN1-206ENST00000481205 CHMP7Q8WUX9 453 aaPredicted RBP7.85□□□□□ -1.15
RTN1-206ENST00000481205 BBXQ8WY36 941 aaPredicted RBP7.85□□□□□ -1.15
RTN1-206ENST00000481205 DISP1Q96F81 1524 aa7.85□□□□□ -1.15
RTN1-206ENST00000481205 PDE4CQ08493 712 aa7.85□□□□□ -1.15
RTN1-206ENST00000481205 MAGI3Q5TCQ9 1506 aa7.85□□□□□ -1.15
RTN1-206ENST00000481205 MTUS2Q5JR59 1369 aa7.85□□□□□ -1.15
RTN1-206ENST00000481205 HOXD11P31277 338 aaPredicted RBP7.85□□□□□ -1.15
RTN1-206ENST00000481205 RAB3GAP2Q9H2M9 1393 aa7.84□□□□□ -1.15
RTN1-206ENST00000481205 CDK13Q14004 1512 aaKnown RBP7.84□□□□□ -1.15
RTN1-206ENST00000481205 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
RTN1-206ENST00000481205 NCOA2Q15596 1464 aa7.81□□□□□ -1.16
RTN1-206ENST00000481205 PTPRKQ15262 1439 aa7.81□□□□□ -1.16
RTN1-206ENST00000481205 ABCA8O94911 1581 aa7.81□□□□□ -1.16
RTN1-206ENST00000481205 ADCY10Q96PN6 1610 aa7.81□□□□□ -1.16
RTN1-206ENST00000481205 FGD6Q6ZV73 1430 aa7.81□□□□□ -1.16
RTN1-206ENST00000481205 EPRSP07814 1512 aaKnown RBP7.8□□□□□ -1.16
RTN1-206ENST00000481205 ARHGEF11O15085 1522 aa7.79□□□□□ -1.16
RTN1-206ENST00000481205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.79□□□□□ -1.16
RTN1-206ENST00000481205 U3KPZ7 1027 aaPredicted RBP7.79□□□□□ -1.16
RTN1-206ENST00000481205 SETD5Q9C0A6 1442 aa7.79□□□□□ -1.16
RTN1-206ENST00000481205 JPH4Q96JJ6 628 aa7.78□□□□□ -1.16
RTN1-206ENST00000481205 PLB1Q6P1J6 1458 aa7.78□□□□□ -1.16
RTN1-206ENST00000481205 CHIC2Q9UKJ5 165 aa7.78□□□□□ -1.16
RTN1-206ENST00000481205 SIN3AQ96ST3 1273 aa7.77□□□□□ -1.16
RTN1-206ENST00000481205 NUP153P49790 1475 aaKnown RBP7.77□□□□□ -1.17
RTN1-206ENST00000481205 MYOM3Q5VTT5 1437 aa7.77□□□□□ -1.17
RTN1-206ENST00000481205 ZNF219Q9P2Y4 722 aaPredicted RBP7.77□□□□□ -1.17
RTN1-206ENST00000481205 HECW1Q76N89 1606 aa7.77□□□□□ -1.17
RTN1-206ENST00000481205 MAPKBP1O60336 1514 aa7.77□□□□□ -1.17
RTN1-206ENST00000481205 CIZ1Q9ULV3 898 aaPredicted RBP7.77□□□□□ -1.17
RTN1-206ENST00000481205 DMRT2Q9Y5R5 561 aa7.76□□□□□ -1.17
RTN1-206ENST00000481205 EHBP1L1Q8N3D4 1523 aa7.76□□□□□ -1.17
RTN1-206ENST00000481205 RAPGEF6Q8TEU7 1601 aa7.76□□□□□ -1.17
RTN1-206ENST00000481205 ZNF644Q9H582 1327 aaPredicted RBP7.76□□□□□ -1.17
RTN1-206ENST00000481205 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
RTN1-206ENST00000481205 UHRF1BP1LA0JNW5 1464 aa7.75□□□□□ -1.17
RTN1-206ENST00000481205 RRP7BPQ9NSQ0 103 aa7.75□□□□□ -1.17
RTN1-206ENST00000481205 CCDC18Q5T9S5 1454 aa7.75□□□□□ -1.17
RTN1-206ENST00000481205 PRG4Q92954 1404 aaPredicted RBP7.74□□□□□ -1.17
RTN1-206ENST00000481205 MYT1LQ9UL68 1186 aa7.74□□□□□ -1.17
RTN1-206ENST00000481205 PTPN23Q9H3S7 1636 aa7.73□□□□□ -1.17
RTN1-206ENST00000481205 DDX10Q13206 875 aaKnown RBP7.73□□□□□ -1.17
RTN1-206ENST00000481205 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
RTN1-206ENST00000481205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.72□□□□□ -1.17
RTN1-206ENST00000481205 BCL11BQ9C0K0 894 aaPredicted RBP7.72□□□□□ -1.17
RTN1-206ENST00000481205 KDM5BQ9UGL1 1544 aa7.72□□□□□ -1.17
RTN1-206ENST00000481205 FGD1P98174 961 aa7.71□□□□□ -1.17
RTN1-206ENST00000481205 NAIPQ13075 1403 aa7.71□□□□□ -1.17
RTN1-206ENST00000481205 ERCC6L2Q5T890 1561 aa7.71□□□□□ -1.18
RTN1-206ENST00000481205 A0A0U1RQG5 324 aaPredicted RBP7.71□□□□□ -1.18
RTN1-206ENST00000481205 NKX1-1Q15270 411 aaPredicted RBP7.71□□□□□ -1.18
RTN1-206ENST00000481205 HFM1A2PYH4 1435 aa7.7□□□□□ -1.18
RTN1-206ENST00000481205 CARMIL2Q6F5E8 1435 aa7.7□□□□□ -1.18
RTN1-206ENST00000481205 KCNH8Q96L42 1107 aa7.7□□□□□ -1.18
RTN1-206ENST00000481205 KDM6BO15054 1643 aa7.7□□□□□ -1.18
RTN1-206ENST00000481205 HIRIP3Q9BW71 556 aaPredicted RBP7.69□□□□□ -1.18
RTN1-206ENST00000481205 ZNF777Q9ULD5 760 aaPredicted RBP7.69□□□□□ -1.18
RTN1-206ENST00000481205 KIF14Q15058 1648 aa7.69□□□□□ -1.18
RTN1-206ENST00000481205 TCOF1Q13428 1488 aaKnown RBP7.69□□□□□ -1.18
RTN1-206ENST00000481205 BRPF1P55201 1214 aaPredicted RBP7.68□□□□□ -1.18
RTN1-206ENST00000481205 RNF25Q96BH1 459 aaPredicted RBP7.68□□□□□ -1.18
RTN1-206ENST00000481205 ABCC2Q92887 1545 aa7.68□□□□□ -1.18
RTN1-206ENST00000481205 DEKP35659 375 aaKnown RBP7.67□□□□□ -1.18
RTN1-206ENST00000481205 ATP10BO94823 1461 aa7.67□□□□□ -1.18
RTN1-206ENST00000481205 TROQ12816 1431 aaPredicted RBP7.67□□□□□ -1.18
RTN1-206ENST00000481205 ANP32CO43423 234 aa7.67□□□□□ -1.18
RTN1-206ENST00000481205 NPM2Q86SE8 214 aaKnown RBP7.67□□□□□ -1.18
RTN1-206ENST00000481205 TAF7LQ5H9L4 462 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms