RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 CFAP74Q9C0B2 1584 aa10.56□□□□□ -0.72
PRDM1-206ENST00000481163 NEO1Q92859 1461 aa10.56□□□□□ -0.72
PRDM1-206ENST00000481163 CDC42BPAQ5VT25 1732 aa10.56□□□□□ -0.72
PRDM1-206ENST00000481163 ARAP3Q8WWN8 1544 aa10.55□□□□□ -0.72
PRDM1-206ENST00000481163 APLP2Q06481 763 aa10.55□□□□□ -0.72
PRDM1-206ENST00000481163 PHLDB1Q86UU1 1377 aa10.54□□□□□ -0.72
PRDM1-206ENST00000481163 VPS8Q8N3P4 1428 aa10.54□□□□□ -0.72
PRDM1-206ENST00000481163 SCAPERQ9BY12 1400 aa10.54□□□□□ -0.72
PRDM1-206ENST00000481163 DENND4BO75064 1496 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-206ENST00000481163 ADGRL1O94910 1474 aa10.54□□□□□ -0.72
PRDM1-206ENST00000481163 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
PRDM1-206ENST00000481163 RICTORQ6R327 1708 aa10.53□□□□□ -0.72
PRDM1-206ENST00000481163 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.72
PRDM1-206ENST00000481163 PREX2Q70Z35 1606 aa10.52□□□□□ -0.73
PRDM1-206ENST00000481163 KDM4FA0A1W2PPD8 638 aa10.52□□□□□ -0.73
PRDM1-206ENST00000481163 AFAP1Q8N556 730 aa10.51□□□□□ -0.73
PRDM1-206ENST00000481163 CFDP1Q9UEE9 299 aaPredicted RBP10.51□□□□□ -0.73
PRDM1-206ENST00000481163 TIAM1Q13009 1591 aa10.51□□□□□ -0.73
PRDM1-206ENST00000481163 FRMPD1Q5SYB0 1578 aa10.51□□□□□ -0.73
PRDM1-206ENST00000481163 EHBP1L1Q8N3D4 1523 aa10.5□□□□□ -0.73
PRDM1-206ENST00000481163 HNRNPMP52272 730 aaKnown RBP eCLIP10.5□□□□□ -0.73
PRDM1-206ENST00000481163 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
PRDM1-206ENST00000481163 SUPT6HQ7KZ85 1726 aaKnown RBP10.5□□□□□ -0.73
PRDM1-206ENST00000481163 MLECQ14165 292 aa10.49□□□□□ -0.73
PRDM1-206ENST00000481163 PLPPR3Q6T4P5 718 aa10.49□□□□□ -0.73
PRDM1-206ENST00000481163 GPATCH8Q9UKJ3 1502 aaKnown RBP10.48□□□□□ -0.73
PRDM1-206ENST00000481163 ZNF644Q9H582 1327 aaPredicted RBP10.48□□□□□ -0.73
PRDM1-206ENST00000481163 ITSN2Q9NZM3 1697 aa10.47□□□□□ -0.73
PRDM1-206ENST00000481163 PPARGC1BQ86YN6 1023 aaKnown RBP10.47□□□□□ -0.73
PRDM1-206ENST00000481163 YEATS2Q9ULM3 1422 aa10.47□□□□□ -0.73
PRDM1-206ENST00000481163 POGZQ7Z3K3 1410 aa10.46□□□□□ -0.74
PRDM1-206ENST00000481163 NCOA2Q15596 1464 aa10.46□□□□□ -0.74
PRDM1-206ENST00000481163 LRRC9Q6ZRR7 1453 aa10.46□□□□□ -0.74
PRDM1-206ENST00000481163 SAMD9LQ8IVG5 1584 aa10.46□□□□□ -0.74
PRDM1-206ENST00000481163 ZFYVE16Q7Z3T8 1539 aa10.45□□□□□ -0.74
PRDM1-206ENST00000481163 TRAPPC8Q9Y2L5 1435 aa10.45□□□□□ -0.74
PRDM1-206ENST00000481163 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
PRDM1-206ENST00000481163 ARHGEF12Q9NZN5 1544 aa10.44□□□□□ -0.74
PRDM1-206ENST00000481163 ZNF518AQ6AHZ1 1483 aa10.44□□□□□ -0.74
PRDM1-206ENST00000481163 ABCC1P33527 1531 aa10.43□□□□□ -0.74
PRDM1-206ENST00000481163 PIAS4Q8N2W9 510 aaPredicted RBP10.43□□□□□ -0.74
PRDM1-206ENST00000481163 ARHGEF40Q8TER5 1519 aa10.43□□□□□ -0.74
PRDM1-206ENST00000481163 SIGLEC1Q9BZZ2 1709 aa10.42□□□□□ -0.74
PRDM1-206ENST00000481163 SPAG9O60271 1321 aaKnown RBP10.42□□□□□ -0.74
PRDM1-206ENST00000481163 HECW2Q9P2P5 1572 aa10.42□□□□□ -0.74
PRDM1-206ENST00000481163 ZMYM4Q5VZL5 1548 aa10.42□□□□□ -0.74
PRDM1-206ENST00000481163 BCORL1Q5H9F3 1711 aa10.41□□□□□ -0.74
PRDM1-206ENST00000481163 KIDINS220Q9ULH0 1771 aa10.4□□□□□ -0.74
PRDM1-206ENST00000481163 MAP3K1Q13233 1512 aa10.4□□□□□ -0.74
PRDM1-206ENST00000481163 ATP10AO60312 1499 aa10.4□□□□□ -0.74
PRDM1-206ENST00000481163 MAGI2Q86UL8 1455 aa10.4□□□□□ -0.74
PRDM1-206ENST00000481163 RIMS1Q86UR5 1692 aaKnown RBP10.4□□□□□ -0.74
PRDM1-206ENST00000481163 ABCA6Q8N139 1617 aa10.4□□□□□ -0.75
PRDM1-206ENST00000481163 CAMSAP2Q08AD1 1489 aa10.39□□□□□ -0.75
PRDM1-206ENST00000481163 MADDQ8WXG6 1647 aa10.39□□□□□ -0.75
PRDM1-206ENST00000481163 KDM5CP41229 1560 aa10.39□□□□□ -0.75
PRDM1-206ENST00000481163 PLEKHH2Q8IVE3 1493 aa10.38□□□□□ -0.75
PRDM1-206ENST00000481163 C9orf84Q5VXU9 1444 aa10.38□□□□□ -0.75
PRDM1-206ENST00000481163 DIP2CQ9Y2E4 1556 aa10.38□□□□□ -0.75
PRDM1-206ENST00000481163 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
PRDM1-206ENST00000481163 ADAMTSL3P82987 1691 aa10.37□□□□□ -0.75
PRDM1-206ENST00000481163 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
PRDM1-206ENST00000481163 TSPY4P0CV99 314 aa10.36□□□□□ -0.75
PRDM1-206ENST00000481163 TSPY10P0CW01 314 aa10.36□□□□□ -0.75
PRDM1-206ENST00000481163 ESF1Q9H501 851 aaKnown RBP10.36□□□□□ -0.75
PRDM1-206ENST00000481163 ATP7AQ04656 1500 aa10.36□□□□□ -0.75
PRDM1-206ENST00000481163 MLH3Q9UHC1 1453 aa10.36□□□□□ -0.75
PRDM1-206ENST00000481163 KIAA1107Q9UPP5 1409 aa10.35□□□□□ -0.75
PRDM1-206ENST00000481163 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
PRDM1-206ENST00000481163 CEBPAP49715 358 aaPredicted RBP10.34□□□□□ -0.75
PRDM1-206ENST00000481163 GGT6Q6P531 493 aa10.34□□□□□ -0.75
PRDM1-206ENST00000481163 PTPN23Q9H3S7 1636 aa10.33□□□□□ -0.76
PRDM1-206ENST00000481163 CHIC2Q9UKJ5 165 aa10.33□□□□□ -0.76
PRDM1-206ENST00000481163 PTPRMP28827 1452 aa10.33□□□□□ -0.76
PRDM1-206ENST00000481163 MBD5Q9P267 1494 aa10.33□□□□□ -0.76
PRDM1-206ENST00000481163 ADGBQ8N7X0 1667 aa10.32□□□□□ -0.76
PRDM1-206ENST00000481163 INO80Q9ULG1 1556 aaPredicted RBP10.32□□□□□ -0.76
PRDM1-206ENST00000481163 CCDC141Q6ZP82 1450 aa10.32□□□□□ -0.76
PRDM1-206ENST00000481163 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
PRDM1-206ENST00000481163 ITGAEP38570 1179 aa10.31□□□□□ -0.76
PRDM1-206ENST00000481163 MIA2Q96PC5 1412 aa10.31□□□□□ -0.76
PRDM1-206ENST00000481163 A2MP01023 1474 aa10.3□□□□□ -0.76
PRDM1-206ENST00000481163 KIF3BO15066 747 aa10.3□□□□□ -0.76
PRDM1-206ENST00000481163 CFAP65Q6ZU64 1925 aaKnown RBP10.3□□□□□ -0.76
PRDM1-206ENST00000481163 FGD6Q6ZV73 1430 aa10.3□□□□□ -0.76
PRDM1-206ENST00000481163 ARHGEF5Q12774 1597 aa10.3□□□□□ -0.76
PRDM1-206ENST00000481163 POTEHQ6S545 545 aa10.29□□□□□ -0.76
PRDM1-206ENST00000481163 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
PRDM1-206ENST00000481163 CLTCQ00610 1675 aaKnown RBP10.28□□□□□ -0.76
PRDM1-206ENST00000481163 REREQ9P2R6 1566 aa10.27□□□□□ -0.76
PRDM1-206ENST00000481163 RTEL1-TNFRSF6BF6WH68 1400 aa10.27□□□□□ -0.77
PRDM1-206ENST00000481163 CROCC2H7BZ55 1655 aa10.27□□□□□ -0.77
PRDM1-206ENST00000481163 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
PRDM1-206ENST00000481163 C3P01024 1663 aa10.26□□□□□ -0.77
PRDM1-206ENST00000481163 AGLP35573 1532 aa10.26□□□□□ -0.77
PRDM1-206ENST00000481163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.77
PRDM1-206ENST00000481163 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
PRDM1-206ENST00000481163 ABCC5O15440 1437 aa10.24□□□□□ -0.77
PRDM1-206ENST00000481163 DAPK1P53355 1430 aa10.24□□□□□ -0.77
PRDM1-206ENST00000481163 HSPA2P54652 639 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms