RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TMEM132AQ24JP5 1023 aa10.51□□□□□ -0.73
COPA-203ENST00000481040 L3MBTL3Q96JM7 780 aaPredicted RBP10.5□□□□□ -0.73
COPA-203ENST00000481040 ARXQ96QS3 562 aa10.5□□□□□ -0.73
COPA-203ENST00000481040 STK25O00506 426 aa10.49□□□□□ -0.73
COPA-203ENST00000481040 VGFO15240 615 aaPredicted RBP10.47□□□□□ -0.73
COPA-203ENST00000481040 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
COPA-203ENST00000481040 MS4A4AQ96JQ5 239 aa10.46□□□□□ -0.73
COPA-203ENST00000481040 BOLA1Q9Y3E2 137 aa10.46□□□□□ -0.73
COPA-203ENST00000481040 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
COPA-203ENST00000481040 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
COPA-203ENST00000481040 RYDENQ9NUL5 291 aaKnown RBP10.41□□□□□ -0.74
COPA-203ENST00000481040 BCL11BQ9C0K0 894 aaPredicted RBP10.4□□□□□ -0.74
COPA-203ENST00000481040 TMEM92Q6UXU6 159 aa10.39□□□□□ -0.75
COPA-203ENST00000481040 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
COPA-203ENST00000481040 SOX12O15370 315 aa10.38□□□□□ -0.75
COPA-203ENST00000481040 MARVELD3Q96A59 401 aa10.38□□□□□ -0.75
COPA-203ENST00000481040 STK24Q9Y6E0 443 aa10.38□□□□□ -0.75
COPA-203ENST00000481040 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
COPA-203ENST00000481040 PCDH10Q9P2E7 1040 aa10.37□□□□□ -0.75
COPA-203ENST00000481040 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
COPA-203ENST00000481040 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
COPA-203ENST00000481040 CDAN1Q8IWY9 1227 aa10.36□□□□□ -0.75
COPA-203ENST00000481040 FBXO22Q8NEZ5 403 aa10.36□□□□□ -0.75
COPA-203ENST00000481040 SNPHO15079 494 aa10.35□□□□□ -0.75
COPA-203ENST00000481040 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
COPA-203ENST00000481040 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
COPA-203ENST00000481040 POTEB3A0JP26 581 aa10.32□□□□□ -0.76
COPA-203ENST00000481040 G3V3G9 751 aa10.32□□□□□ -0.76
COPA-203ENST00000481040 POTEBQ6S5H4 581 aa10.32□□□□□ -0.76
COPA-203ENST00000481040 LMOD2Q6P5Q4 547 aa10.31□□□□□ -0.76
COPA-203ENST00000481040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
COPA-203ENST00000481040 HOMEZQ8IX15 550 aa10.28□□□□□ -0.76
COPA-203ENST00000481040 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
COPA-203ENST00000481040 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
COPA-203ENST00000481040 NLRP6P59044 892 aa10.27□□□□□ -0.77
COPA-203ENST00000481040 EMP3P54852 163 aa10.24□□□□□ -0.77
COPA-203ENST00000481040 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
COPA-203ENST00000481040 BRPF1P55201 1214 aaPredicted RBP10.22□□□□□ -0.77
COPA-203ENST00000481040 FAM205CA6NFA0 338 aa10.21□□□□□ -0.77
COPA-203ENST00000481040 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
COPA-203ENST00000481040 PPP1R37O75864 691 aa10.2□□□□□ -0.78
COPA-203ENST00000481040 HOXB1P14653 301 aaPredicted RBP10.19□□□□□ -0.78
COPA-203ENST00000481040 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
COPA-203ENST00000481040 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
COPA-203ENST00000481040 DOK7Q18PE1 504 aa10.17□□□□□ -0.78
COPA-203ENST00000481040 KIF3CO14782 793 aa10.16□□□□□ -0.78
COPA-203ENST00000481040 ZNF710Q8N1W2 664 aa10.15□□□□□ -0.78
COPA-203ENST00000481040 GPR153Q6NV75 609 aa10.14□□□□□ -0.79
COPA-203ENST00000481040 ZC3H15Q8WU90 426 aaKnown RBP10.14□□□□□ -0.79
COPA-203ENST00000481040 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
COPA-203ENST00000481040 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
COPA-203ENST00000481040 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
COPA-203ENST00000481040 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
COPA-203ENST00000481040 KHSRPQ92945 711 aaKnown RBP eCLIP10.11□□□□□ -0.793e-8■■□□□ 12.2
COPA-203ENST00000481040 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
COPA-203ENST00000481040 ARSIQ5FYB1 569 aa10.08□□□□□ -0.8
COPA-203ENST00000481040 SLC24A3Q9HC58 644 aa10.08□□□□□ -0.8
COPA-203ENST00000481040 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
COPA-203ENST00000481040 ERBB3P21860 1342 aa10.07□□□□□ -0.8
COPA-203ENST00000481040 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
COPA-203ENST00000481040 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
COPA-203ENST00000481040 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
COPA-203ENST00000481040 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
COPA-203ENST00000481040 E2F4Q16254 413 aa10.05□□□□□ -0.8
COPA-203ENST00000481040 SEMA3EO15041 775 aa10.04□□□□□ -0.8
COPA-203ENST00000481040 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
COPA-203ENST00000481040 ZMYND10O75800 440 aa9.98□□□□□ -0.81
COPA-203ENST00000481040 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
COPA-203ENST00000481040 NUDT7P0C024 238 aa9.97□□□□□ -0.81
COPA-203ENST00000481040 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
COPA-203ENST00000481040 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
COPA-203ENST00000481040 SLC34A2O95436 690 aa9.96□□□□□ -0.82
COPA-203ENST00000481040 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
COPA-203ENST00000481040 DSG2Q14126 1118 aa9.93□□□□□ -0.82
COPA-203ENST00000481040 KDM4FA0A1W2PPD8 638 aa9.92□□□□□ -0.82
COPA-203ENST00000481040 FOXK1P85037 733 aa9.92□□□□□ -0.82
COPA-203ENST00000481040 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
COPA-203ENST00000481040 GPHNQ9NQX3 736 aaPredicted RBP9.92□□□□□ -0.82
COPA-203ENST00000481040 LHX6Q9UPM6 363 aa9.92□□□□□ -0.82
COPA-203ENST00000481040 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
COPA-203ENST00000481040 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
COPA-203ENST00000481040 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
COPA-203ENST00000481040 PTCD2Q8WV60 388 aaKnown RBP9.87□□□□□ -0.83
COPA-203ENST00000481040 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
COPA-203ENST00000481040 CRISPLD2Q9H0B8 497 aa9.87□□□□□ -0.83
COPA-203ENST00000481040 PDE4AP27815 886 aa9.86□□□□□ -0.83
COPA-203ENST00000481040 ARIH1Q9Y4X5 557 aaPredicted RBP9.86□□□□□ -0.83
COPA-203ENST00000481040 MFSD10Q14728 455 aa9.85□□□□□ -0.83
COPA-203ENST00000481040 AK7Q96M32 723 aa9.85□□□□□ -0.83
COPA-203ENST00000481040 AXIN2Q9Y2T1 843 aa9.85□□□□□ -0.83
COPA-203ENST00000481040 GPBP1L1Q9HC44 474 aaPredicted RBP9.83□□□□□ -0.84
COPA-203ENST00000481040 ZMYND15Q9H091 742 aa9.82□□□□□ -0.84
COPA-203ENST00000481040 LSM11P83369 360 aaKnown RBP eCLIP9.81□□□□□ -0.84
COPA-203ENST00000481040 ANKRD13DQ6ZTN6 518 aa9.81□□□□□ -0.84
COPA-203ENST00000481040 PODXL2Q9NZ53 605 aa9.81□□□□□ -0.84
COPA-203ENST00000481040 IL27Q8NEV9 243 aa9.8□□□□□ -0.84
COPA-203ENST00000481040 OXER1Q8TDS5 423 aa9.8□□□□□ -0.84
COPA-203ENST00000481040 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
COPA-203ENST00000481040 UBTFP17480 764 aaKnown RBP9.79□□□□□ -0.84
COPA-203ENST00000481040 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms