RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 ARAP3Q8WWN8 1544 aa22.25■■□□□ 1.15
SNRNP200-205ENST00000480835 ITGAEP38570 1179 aa22.23■■□□□ 1.15
SNRNP200-205ENST00000480835 DNMT1P26358 1616 aaKnown RBP22.23■■□□□ 1.15
SNRNP200-205ENST00000480835 PLCH2O75038 1416 aa22.22■■□□□ 1.15
SNRNP200-205ENST00000480835 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
SNRNP200-205ENST00000480835 PLEKHH2Q8IVE3 1493 aa22.18■■□□□ 1.14
SNRNP200-205ENST00000480835 SAMD9LQ8IVG5 1584 aa22.17■■□□□ 1.14
SNRNP200-205ENST00000480835 DAPK1P53355 1430 aa22.17■■□□□ 1.14
SNRNP200-205ENST00000480835 ZNF644Q9H582 1327 aaPredicted RBP22.17■■□□□ 1.14
SNRNP200-205ENST00000480835 ZNF777Q9ULD5 760 aaPredicted RBP22.16■■□□□ 1.14
SNRNP200-205ENST00000480835 CROCC2H7BZ55 1655 aa22.16■■□□□ 1.14
SNRNP200-205ENST00000480835 ARHGEF5Q12774 1597 aa22.16■■□□□ 1.14
SNRNP200-205ENST00000480835 PTPRKQ15262 1439 aa22.15■■□□□ 1.14
SNRNP200-205ENST00000480835 ABCC5O15440 1437 aa22.14■■□□□ 1.14
SNRNP200-205ENST00000480835 AKNAQ7Z591 1439 aa22.14■■□□□ 1.14
SNRNP200-205ENST00000480835 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
SNRNP200-205ENST00000480835 SETD5Q9C0A6 1442 aa22.13■■□□□ 1.13
SNRNP200-205ENST00000480835 RSPH4AQ5TD94 716 aa22.12■■□□□ 1.13
SNRNP200-205ENST00000480835 KIAA1107Q9UPP5 1409 aa22.12■■□□□ 1.13
SNRNP200-205ENST00000480835 HFM1A2PYH4 1435 aa22.11■■□□□ 1.13
SNRNP200-205ENST00000480835 GLI2P10070 1586 aa22.11■■□□□ 1.13
SNRNP200-205ENST00000480835 ROCK1Q13464 1354 aa22.11■■□□□ 1.13
SNRNP200-205ENST00000480835 ADGBQ8N7X0 1667 aa22.11■■□□□ 1.13
SNRNP200-205ENST00000480835 SHANK2Q9UPX8 1470 aa22.1■■□□□ 1.13
SNRNP200-205ENST00000480835 HRCP23327 699 aa22.09■■□□□ 1.13
SNRNP200-205ENST00000480835 GCC2Q8IWJ2 1684 aa22.09■■□□□ 1.13
SNRNP200-205ENST00000480835 MBD5Q9P267 1494 aa22.09■■□□□ 1.13
SNRNP200-205ENST00000480835 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.13
SNRNP200-205ENST00000480835 CCDC141Q6ZP82 1450 aa22.07■■□□□ 1.12
SNRNP200-205ENST00000480835 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
SNRNP200-205ENST00000480835 ABCC1P33527 1531 aa22.06■■□□□ 1.12
SNRNP200-205ENST00000480835 SYCP2Q9BX26 1530 aa22.06■■□□□ 1.12
SNRNP200-205ENST00000480835 FANCAO15360 1455 aa22.06■■□□□ 1.12
SNRNP200-205ENST00000480835 ADGRL2O95490 1459 aa22.06■■□□□ 1.12
SNRNP200-205ENST00000480835 RAB3GAP2Q9H2M9 1393 aa22.05■■□□□ 1.12
SNRNP200-205ENST00000480835 NAIPQ13075 1403 aa22.05■■□□□ 1.12
SNRNP200-205ENST00000480835 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
SNRNP200-205ENST00000480835 DIP2BQ9P265 1576 aa22.04■■□□□ 1.12
SNRNP200-205ENST00000480835 MAST1Q9Y2H9 1570 aa22.03■■□□□ 1.12
SNRNP200-205ENST00000480835 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.12
SNRNP200-205ENST00000480835 CHIC2Q9UKJ5 165 aa22.02■■□□□ 1.12
SNRNP200-205ENST00000480835 C9orf84Q5VXU9 1444 aa22.01■■□□□ 1.11
SNRNP200-205ENST00000480835 TSPY4P0CV99 314 aa22.01■■□□□ 1.11
SNRNP200-205ENST00000480835 TSPY10P0CW01 314 aa22.01■■□□□ 1.11
SNRNP200-205ENST00000480835 ACIN1Q9UKV3 1341 aaKnown RBP22.01■■□□□ 1.11
SNRNP200-205ENST00000480835 ANKRD30AQ9BXX3 1397 aa21.99■■□□□ 1.11
SNRNP200-205ENST00000480835 CCER1Q8TC90 406 aaPredicted RBP21.99■■□□□ 1.11
SNRNP200-205ENST00000480835 NCOA1Q15788 1441 aa21.98■■□□□ 1.11
SNRNP200-205ENST00000480835 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
SNRNP200-205ENST00000480835 NEO1Q92859 1461 aa21.97■■□□□ 1.11
SNRNP200-205ENST00000480835 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
SNRNP200-205ENST00000480835 RRP7BPQ9NSQ0 103 aa21.97■■□□□ 1.11
SNRNP200-205ENST00000480835 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
SNRNP200-205ENST00000480835 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
SNRNP200-205ENST00000480835 FAM69CQ0P6D2 419 aa21.93■■□□□ 1.1
SNRNP200-205ENST00000480835 KIF13AQ9H1H9 1805 aa21.92■■□□□ 1.1
SNRNP200-205ENST00000480835 PLXNC1O60486 1568 aa21.92■■□□□ 1.1
SNRNP200-205ENST00000480835 SCAPERQ9BY12 1400 aa21.91■■□□□ 1.1
SNRNP200-205ENST00000480835 TRAPPC8Q9Y2L5 1435 aa21.91■■□□□ 1.1
SNRNP200-205ENST00000480835 DHX57Q6P158 1386 aaKnown RBP21.91■■□□□ 1.1
SNRNP200-205ENST00000480835 CLSPNQ9HAW4 1339 aa21.9■■□□□ 1.1
SNRNP200-205ENST00000480835 RTEL1-TNFRSF6BF6WH68 1400 aa21.89■■□□□ 1.1
SNRNP200-205ENST00000480835 TEX14Q8IWB6 1497 aa21.88■■□□□ 1.09
SNRNP200-205ENST00000480835 KDM6BO15054 1643 aa21.87■■□□□ 1.09
SNRNP200-205ENST00000480835 KIF15Q9NS87 1388 aa21.87■■□□□ 1.09
SNRNP200-205ENST00000480835 ZNF518AQ6AHZ1 1483 aa21.86■■□□□ 1.09
SNRNP200-205ENST00000480835 PPRC1Q5VV67 1664 aaKnown RBP21.85■■□□□ 1.09
SNRNP200-205ENST00000480835 INO80Q9ULG1 1556 aaPredicted RBP21.85■■□□□ 1.09
SNRNP200-205ENST00000480835 SPAG9O60271 1321 aaKnown RBP21.84■■□□□ 1.09
SNRNP200-205ENST00000480835 TSPOAP1O95153 1857 aa21.84■■□□□ 1.09
SNRNP200-205ENST00000480835 ANKRD50Q9ULJ7 1429 aa21.84■■□□□ 1.09
SNRNP200-205ENST00000480835 ZFYVE16Q7Z3T8 1539 aa21.84■■□□□ 1.09
SNRNP200-205ENST00000480835 POGZQ7Z3K3 1410 aa21.83■■□□□ 1.09
SNRNP200-205ENST00000480835 KDM5CP41229 1560 aa21.82■■□□□ 1.08
SNRNP200-205ENST00000480835 ATP7AQ04656 1500 aa21.82■■□□□ 1.08
SNRNP200-205ENST00000480835 DUOX2Q9NRD8 1548 aa21.82■■□□□ 1.08
SNRNP200-205ENST00000480835 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
SNRNP200-205ENST00000480835 DENND4BO75064 1496 aaPredicted RBP21.81■■□□□ 1.08
SNRNP200-205ENST00000480835 RICTORQ6R327 1708 aa21.77■■□□□ 1.08
SNRNP200-205ENST00000480835 MLH3Q9UHC1 1453 aa21.77■■□□□ 1.07
SNRNP200-205ENST00000480835 KIDINS220Q9ULH0 1771 aa21.76■■□□□ 1.07
SNRNP200-205ENST00000480835 ERBINQ96RT1 1412 aa21.76■■□□□ 1.07
SNRNP200-205ENST00000480835 HECW2Q9P2P5 1572 aa21.76■■□□□ 1.07
SNRNP200-205ENST00000480835 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
SNRNP200-205ENST00000480835 KDM5DQ9BY66 1539 aa21.72■■□□□ 1.07
SNRNP200-205ENST00000480835 UNC13BO14795 1591 aa21.7■■□□□ 1.06
SNRNP200-205ENST00000480835 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
SNRNP200-205ENST00000480835 ZMYM4Q5VZL5 1548 aa21.7■■□□□ 1.06
SNRNP200-205ENST00000480835 EIF2AK4Q9P2K8 1649 aaKnown RBP21.69■■□□□ 1.06
SNRNP200-205ENST00000480835 FRMPD1Q5SYB0 1578 aa21.68■■□□□ 1.06
SNRNP200-205ENST00000480835 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
SNRNP200-205ENST00000480835 MPHOSPH9Q99550 1183 aa21.67■■□□□ 1.06
SNRNP200-205ENST00000480835 PZPP20742 1482 aa21.66■■□□□ 1.06
SNRNP200-205ENST00000480835 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
SNRNP200-205ENST00000480835 MAGI2Q86UL8 1455 aa21.64■■□□□ 1.06
SNRNP200-205ENST00000480835 ABCA6Q8N139 1617 aa21.64■■□□□ 1.05
SNRNP200-205ENST00000480835 NUP155O75694 1391 aa21.63■■□□□ 1.05
SNRNP200-205ENST00000480835 A2MP01023 1474 aa21.63■■□□□ 1.05
SNRNP200-205ENST00000480835 SLC4A1APQ9BWU0 796 aaKnown RBP21.62■■□□□ 1.05
SNRNP200-205ENST00000480835 DEPDC5O75140 1603 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms