RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
UBE2F-221ENST00000480828 PLSCR2Q9NRY7 297 aa8.16□□□□□ -1.1
UBE2F-221ENST00000480828 PPP1R37O75864 691 aa8.15□□□□□ -1.1
UBE2F-221ENST00000480828 KIF3CO14782 793 aa8.13□□□□□ -1.11
UBE2F-221ENST00000480828 DCAF8L2P0C7V8 631 aa8.12□□□□□ -1.11
UBE2F-221ENST00000480828 NKX1-1Q15270 411 aaPredicted RBP8.12□□□□□ -1.11
UBE2F-221ENST00000480828 DNAJC5Q9H3Z4 198 aa8.12□□□□□ -1.11
UBE2F-221ENST00000480828 HOXB1P14653 301 aaPredicted RBP8.11□□□□□ -1.11
UBE2F-221ENST00000480828 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
UBE2F-221ENST00000480828 EMP3P54852 163 aa8.09□□□□□ -1.11
UBE2F-221ENST00000480828 DOK7Q18PE1 504 aa8.09□□□□□ -1.11
UBE2F-221ENST00000480828 GPR153Q6NV75 609 aa8.08□□□□□ -1.12
UBE2F-221ENST00000480828 HS3ST6Q96QI5 342 aa8.08□□□□□ -1.12
UBE2F-221ENST00000480828 C2orf72A6NCS6 295 aa8.07□□□□□ -1.12
UBE2F-221ENST00000480828 CHGAP10645 457 aaKnown RBP8.07□□□□□ -1.12
UBE2F-221ENST00000480828 FAM205CA6NFA0 338 aa8.06□□□□□ -1.12
UBE2F-221ENST00000480828 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
UBE2F-221ENST00000480828 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
UBE2F-221ENST00000480828 ZNF710Q8N1W2 664 aa8.04□□□□□ -1.12
UBE2F-221ENST00000480828 ZSWIM6Q9HCJ5 1215 aa8.04□□□□□ -1.12
UBE2F-221ENST00000480828 PRKCSHP14314 528 aaPredicted RBP8.01□□□□□ -1.13
UBE2F-221ENST00000480828 RIMBP2O15034 1052 aa8□□□□□ -1.13
UBE2F-221ENST00000480828 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.13
UBE2F-221ENST00000480828 ARSIQ5FYB1 569 aa7.99□□□□□ -1.13
UBE2F-221ENST00000480828 SPNS2Q8IVW8 549 aa7.99□□□□□ -1.13
UBE2F-221ENST00000480828 SLC34A2O95436 690 aa7.98□□□□□ -1.13
UBE2F-221ENST00000480828 GTPBP6O43824 516 aaPredicted RBP7.97□□□□□ -1.13
UBE2F-221ENST00000480828 VARS2Q5ST30 1063 aaKnown RBP7.97□□□□□ -1.13
UBE2F-221ENST00000480828 BCANQ96GW7 911 aa7.97□□□□□ -1.13
UBE2F-221ENST00000480828 ERBB3P21860 1342 aa7.97□□□□□ -1.13
UBE2F-221ENST00000480828 TMC2Q8TDI7 906 aa7.96□□□□□ -1.14
UBE2F-221ENST00000480828 KDM4FA0A1W2PPD8 638 aa7.95□□□□□ -1.14
UBE2F-221ENST00000480828 FOXK1P85037 733 aa7.95□□□□□ -1.14
UBE2F-221ENST00000480828 MMRN1Q13201 1228 aa7.95□□□□□ -1.14
UBE2F-221ENST00000480828 GPHNQ9NQX3 736 aaPredicted RBP7.95□□□□□ -1.14
UBE2F-221ENST00000480828 PCDHGA4Q9Y5G9 962 aa7.94□□□□□ -1.14
UBE2F-221ENST00000480828 DSG2Q14126 1118 aa7.93□□□□□ -1.14
UBE2F-221ENST00000480828 VSIG10Q8N0Z9 540 aa7.93□□□□□ -1.14
UBE2F-221ENST00000480828 ZNF687Q8N1G0 1237 aa7.93□□□□□ -1.14
UBE2F-221ENST00000480828 ZNF316A6NFI3 1004 aaPredicted RBP7.92□□□□□ -1.14
UBE2F-221ENST00000480828 CRISPLD2Q9H0B8 497 aa7.92□□□□□ -1.14
UBE2F-221ENST00000480828 NUDT7P0C024 238 aa7.91□□□□□ -1.14
UBE2F-221ENST00000480828 PTCD2Q8WV60 388 aaKnown RBP7.91□□□□□ -1.14
UBE2F-221ENST00000480828 NCKAP5LQ9HCH0 1330 aa7.91□□□□□ -1.14
UBE2F-221ENST00000480828 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.14
UBE2F-221ENST00000480828 PLPP6Q8IY26 295 aa7.9□□□□□ -1.14
UBE2F-221ENST00000480828 KDM2AQ9Y2K7 1162 aa7.9□□□□□ -1.14
UBE2F-221ENST00000480828 RYDENQ9NUL5 291 aaKnown RBP7.89□□□□□ -1.15
UBE2F-221ENST00000480828 LHX6Q9UPM6 363 aa7.88□□□□□ -1.15
UBE2F-221ENST00000480828 PAXIP1Q6ZW49 1069 aaPredicted RBP7.86□□□□□ -1.15
UBE2F-221ENST00000480828 BBXQ8WY36 941 aaPredicted RBP7.86□□□□□ -1.15
UBE2F-221ENST00000480828 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.86□□□□□ -1.15
UBE2F-221ENST00000480828 CFAP44Q96MT7 982 aa7.85□□□□□ -1.15
UBE2F-221ENST00000480828 CADPS2Q86UW7 1296 aa7.84□□□□□ -1.15
UBE2F-221ENST00000480828 OXER1Q8TDS5 423 aa7.84□□□□□ -1.15
UBE2F-221ENST00000480828 MFSD10Q14728 455 aa7.82□□□□□ -1.16
UBE2F-221ENST00000480828 TPRNQ4KMQ1 711 aa7.82□□□□□ -1.16
UBE2F-221ENST00000480828 PPP1R15BQ5SWA1 713 aa7.82□□□□□ -1.16
UBE2F-221ENST00000480828 PDE4AP27815 886 aa7.79□□□□□ -1.16
UBE2F-221ENST00000480828 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBE2F-221ENST00000480828 AXIN2Q9Y2T1 843 aa7.79□□□□□ -1.16
UBE2F-221ENST00000480828 PBX2P40425 430 aa7.77□□□□□ -1.17
UBE2F-221ENST00000480828 UPF1Q92900 1129 aaKnown RBP eCLIP7.77□□□□□ -1.17
UBE2F-221ENST00000480828 LARP6Q9BRS8 491 aaKnown RBP7.77□□□□□ -1.17
UBE2F-221ENST00000480828 TSHZ2Q9NRE2 1034 aa7.77□□□□□ -1.17
UBE2F-221ENST00000480828 EMILIN3Q9NT22 766 aa7.76□□□□□ -1.17
UBE2F-221ENST00000480828 DDX27Q96GQ7 796 aaKnown RBP7.75□□□□□ -1.17
UBE2F-221ENST00000480828 PSDA5PKW4 1024 aaPredicted RBP7.74□□□□□ -1.17
UBE2F-221ENST00000480828 ANKRD13DQ6ZTN6 518 aa7.74□□□□□ -1.17
UBE2F-221ENST00000480828 SPRYD3Q8NCJ5 442 aa7.74□□□□□ -1.17
UBE2F-221ENST00000480828 TBC1D12O60347 775 aa7.73□□□□□ -1.17
UBE2F-221ENST00000480828 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
UBE2F-221ENST00000480828 RNF166Q96A37 237 aaPredicted RBP7.73□□□□□ -1.17
UBE2F-221ENST00000480828 ANO8Q9HCE9 1232 aaPredicted RBP7.73□□□□□ -1.17
UBE2F-221ENST00000480828 MYT1LQ9UL68 1186 aa7.73□□□□□ -1.17
UBE2F-221ENST00000480828 ARHGAP33O14559 1287 aa7.72□□□□□ -1.17
UBE2F-221ENST00000480828 PSEN2P49810 448 aa7.71□□□□□ -1.18
UBE2F-221ENST00000480828 PTGER2P43116 358 aa7.7□□□□□ -1.18
UBE2F-221ENST00000480828 FOSBP53539 338 aa7.7□□□□□ -1.18
UBE2F-221ENST00000480828 CAMK2BQ13554 666 aa7.7□□□□□ -1.18
UBE2F-221ENST00000480828 PPP4R3BQ5MIZ7 849 aa7.7□□□□□ -1.18
UBE2F-221ENST00000480828 HRO43593 1189 aa7.69□□□□□ -1.18
UBE2F-221ENST00000480828 ADGRD1Q6QNK2 874 aa7.69□□□□□ -1.18
UBE2F-221ENST00000480828 EVI5O60447 810 aa7.68□□□□□ -1.18
UBE2F-221ENST00000480828 ZNF454Q8N9F8 522 aa7.67□□□□□ -1.18
UBE2F-221ENST00000480828 BCL2L12Q9HB09 334 aa7.67□□□□□ -1.18
UBE2F-221ENST00000480828 TK2O00142 265 aa7.66□□□□□ -1.18
UBE2F-221ENST00000480828 JPH4Q96JJ6 628 aa7.66□□□□□ -1.18
UBE2F-221ENST00000480828 KCNK17Q96T54 332 aa7.65□□□□□ -1.18
UBE2F-221ENST00000480828 ADAM33Q9BZ11 813 aa7.64□□□□□ -1.19
UBE2F-221ENST00000480828 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
UBE2F-221ENST00000480828 PCDHGA10Q9Y5H3 936 aa7.63□□□□□ -1.19
UBE2F-221ENST00000480828 VPS9D1Q9Y2B5 631 aa7.62□□□□□ -1.19
UBE2F-221ENST00000480828 SLC4A5Q9BY07 1137 aa7.61□□□□□ -1.19
UBE2F-221ENST00000480828 DPYSL4O14531 572 aa7.6□□□□□ -1.19
UBE2F-221ENST00000480828 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
UBE2F-221ENST00000480828 BHMG1C9JSJ3 638 aaPredicted RBP7.59□□□□□ -1.19
UBE2F-221ENST00000480828 NBR1Q14596 966 aa7.59□□□□□ -1.19
UBE2F-221ENST00000480828 ZBED2Q9BTP6 218 aa7.59□□□□□ -1.19
UBE2F-221ENST00000480828 PTPREP23469 700 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms