RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
CNKSR1-204ENST00000480348 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
CNKSR1-204ENST00000480348 POGZQ7Z3K3 1410 aa17.55■□□□□ 0.4
CNKSR1-204ENST00000480348 PREX2Q70Z35 1606 aa17.54■□□□□ 0.4
CNKSR1-204ENST00000480348 MADDQ8WXG6 1647 aa17.54■□□□□ 0.4
CNKSR1-204ENST00000480348 ARHGAP5Q13017 1502 aa17.52■□□□□ 0.4
CNKSR1-204ENST00000480348 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.39
CNKSR1-204ENST00000480348 PTPRMP28827 1452 aa17.51■□□□□ 0.39
CNKSR1-204ENST00000480348 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
CNKSR1-204ENST00000480348 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
CNKSR1-204ENST00000480348 RIMS1Q86UR5 1692 aaKnown RBP17.5■□□□□ 0.39
CNKSR1-204ENST00000480348 KDM5CP41229 1560 aa17.49■□□□□ 0.39
CNKSR1-204ENST00000480348 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
CNKSR1-204ENST00000480348 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
CNKSR1-204ENST00000480348 FER1L4A9Z1Z3 1794 aa17.48■□□□□ 0.39
CNKSR1-204ENST00000480348 CDC42BPAQ5VT25 1732 aa17.48■□□□□ 0.39
CNKSR1-204ENST00000480348 ITSN2Q9NZM3 1697 aa17.46■□□□□ 0.39
CNKSR1-204ENST00000480348 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.39
CNKSR1-204ENST00000480348 YEATS2Q9ULM3 1422 aa17.46■□□□□ 0.39
CNKSR1-204ENST00000480348 ABCC1P33527 1531 aa17.45■□□□□ 0.38
CNKSR1-204ENST00000480348 C9orf84Q5VXU9 1444 aa17.44■□□□□ 0.38
CNKSR1-204ENST00000480348 REREQ9P2R6 1566 aa17.43■□□□□ 0.38
CNKSR1-204ENST00000480348 ATP10AO60312 1499 aa17.43■□□□□ 0.38
CNKSR1-204ENST00000480348 DIP2CQ9Y2E4 1556 aa17.39■□□□□ 0.37
CNKSR1-204ENST00000480348 ARHGEF12Q9NZN5 1544 aa17.38■□□□□ 0.37
CNKSR1-204ENST00000480348 MLH3Q9UHC1 1453 aa17.37■□□□□ 0.37
CNKSR1-204ENST00000480348 ABCA6Q8N139 1617 aa17.37■□□□□ 0.37
CNKSR1-204ENST00000480348 LMTK3Q96Q04 1460 aa17.35■□□□□ 0.37
CNKSR1-204ENST00000480348 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
CNKSR1-204ENST00000480348 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
CNKSR1-204ENST00000480348 KIDINS220Q9ULH0 1771 aa17.34■□□□□ 0.37
CNKSR1-204ENST00000480348 PREX1Q8TCU6 1659 aa17.33■□□□□ 0.37
CNKSR1-204ENST00000480348 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.37
CNKSR1-204ENST00000480348 CEP162Q5TB80 1403 aa17.33■□□□□ 0.36
CNKSR1-204ENST00000480348 AGLP35573 1532 aa17.32■□□□□ 0.36
CNKSR1-204ENST00000480348 SYCP2Q9BX26 1530 aa17.31■□□□□ 0.36
CNKSR1-204ENST00000480348 MTUS2Q5JR59 1369 aa17.31■□□□□ 0.36
CNKSR1-204ENST00000480348 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-204ENST00000480348 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
CNKSR1-204ENST00000480348 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
CNKSR1-204ENST00000480348 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
CNKSR1-204ENST00000480348 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
CNKSR1-204ENST00000480348 INO80Q9ULG1 1556 aaPredicted RBP17.28■□□□□ 0.36
CNKSR1-204ENST00000480348 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
CNKSR1-204ENST00000480348 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.36
CNKSR1-204ENST00000480348 KIAA1107Q9UPP5 1409 aa17.27■□□□□ 0.35
CNKSR1-204ENST00000480348 SETD1BQ9UPS6 1966 aaKnown RBP17.26■□□□□ 0.35
CNKSR1-204ENST00000480348 MLECQ14165 292 aa17.26■□□□□ 0.35
CNKSR1-204ENST00000480348 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
CNKSR1-204ENST00000480348 ADGBQ8N7X0 1667 aa17.25■□□□□ 0.35
CNKSR1-204ENST00000480348 MROH2AA6NES4 1674 aa17.24■□□□□ 0.35
CNKSR1-204ENST00000480348 C3P01024 1663 aa17.24■□□□□ 0.35
CNKSR1-204ENST00000480348 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
CNKSR1-204ENST00000480348 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
CNKSR1-204ENST00000480348 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
CNKSR1-204ENST00000480348 PLXNC1O60486 1568 aa17.21■□□□□ 0.35
CNKSR1-204ENST00000480348 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
CNKSR1-204ENST00000480348 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
CNKSR1-204ENST00000480348 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
CNKSR1-204ENST00000480348 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
CNKSR1-204ENST00000480348 UHRF1BP1Q6BDS2 1440 aa17.17■□□□□ 0.34
CNKSR1-204ENST00000480348 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
CNKSR1-204ENST00000480348 ILDR1Q86SU0 546 aaPredicted RBP17.17■□□□□ 0.34
CNKSR1-204ENST00000480348 A2MP01023 1474 aa17.15■□□□□ 0.34
CNKSR1-204ENST00000480348 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
CNKSR1-204ENST00000480348 HNRNPMP52272 730 aaKnown RBP eCLIP17.14■□□□□ 0.33
CNKSR1-204ENST00000480348 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
CNKSR1-204ENST00000480348 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
CNKSR1-204ENST00000480348 CLTCQ00610 1675 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-204ENST00000480348 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
CNKSR1-204ENST00000480348 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
CNKSR1-204ENST00000480348 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
CNKSR1-204ENST00000480348 HSPA2P54652 639 aa17.11■□□□□ 0.33
CNKSR1-204ENST00000480348 NPATQ14207 1427 aa17.11■□□□□ 0.33
CNKSR1-204ENST00000480348 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
CNKSR1-204ENST00000480348 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
CNKSR1-204ENST00000480348 FAM135AQ9P2D6 1515 aa17.1■□□□□ 0.33
CNKSR1-204ENST00000480348 STRCQ7RTU9 1775 aa17.1■□□□□ 0.33
CNKSR1-204ENST00000480348 CEBPAP49715 358 aaPredicted RBP17.09■□□□□ 0.33
CNKSR1-204ENST00000480348 ZNF142P52746 1687 aaPredicted RBP17.09■□□□□ 0.33
CNKSR1-204ENST00000480348 RSPH4AQ5TD94 716 aa17.07■□□□□ 0.32
CNKSR1-204ENST00000480348 FBXO41Q8TF61 875 aa17.07■□□□□ 0.32
CNKSR1-204ENST00000480348 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
CNKSR1-204ENST00000480348 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
CNKSR1-204ENST00000480348 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
CNKSR1-204ENST00000480348 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
CNKSR1-204ENST00000480348 MAST1Q9Y2H9 1570 aa17.03■□□□□ 0.32
CNKSR1-204ENST00000480348 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
CNKSR1-204ENST00000480348 DHX29Q7Z478 1369 aaKnown RBP17.02■□□□□ 0.31
CNKSR1-204ENST00000480348 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
CNKSR1-204ENST00000480348 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
CNKSR1-204ENST00000480348 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
CNKSR1-204ENST00000480348 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
CNKSR1-204ENST00000480348 ZC3H13Q5T200 1668 aaKnown RBP17■□□□□ 0.31
CNKSR1-204ENST00000480348 PTPRTO14522 1441 aa16.99■□□□□ 0.31
CNKSR1-204ENST00000480348 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
CNKSR1-204ENST00000480348 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
CNKSR1-204ENST00000480348 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
CNKSR1-204ENST00000480348 RNF17Q9BXT8 1623 aaKnown RBP16.98■□□□□ 0.31
CNKSR1-204ENST00000480348 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms