RNA–Protein interactions for RNA: ENST00000479977.6

VAV3-205, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-205ENST00000479977 TAOK2Q9UL54 1235 aa10.73□□□□□ -0.69
VAV3-205ENST00000479977 RIMBP2O15034 1052 aa10.72□□□□□ -0.69
VAV3-205ENST00000479977 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
VAV3-205ENST00000479977 RGL2O15211 777 aa10.71□□□□□ -0.69
VAV3-205ENST00000479977 KRTAP3-3Q9BYR6 98 aa10.71□□□□□ -0.69
VAV3-205ENST00000479977 KRTAP3-2Q9BYR7 98 aa10.71□□□□□ -0.69
VAV3-205ENST00000479977 ERBB3P21860 1342 aa10.7□□□□□ -0.7
VAV3-205ENST00000479977 STK25O00506 426 aa10.7□□□□□ -0.7
VAV3-205ENST00000479977 NLRP6P59044 892 aa10.7□□□□□ -0.7
VAV3-205ENST00000479977 FBXO22Q8NEZ5 403 aa10.65□□□□□ -0.7
VAV3-205ENST00000479977 VARS2Q5ST30 1063 aaKnown RBP10.64□□□□□ -0.71
VAV3-205ENST00000479977 MFRPQ9BY79 579 aa10.64□□□□□ -0.71
VAV3-205ENST00000479977 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
VAV3-205ENST00000479977 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
VAV3-205ENST00000479977 ARSIQ5FYB1 569 aa10.57□□□□□ -0.72
VAV3-205ENST00000479977 KHSRPQ92945 711 aaKnown RBP eCLIP10.54□□□□□ -0.72
VAV3-205ENST00000479977 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
VAV3-205ENST00000479977 DCAF8L2P0C7V8 631 aa10.51□□□□□ -0.73
VAV3-205ENST00000479977 ZNF687Q8N1G0 1237 aa10.51□□□□□ -0.73
VAV3-205ENST00000479977 KIF3CO14782 793 aa10.49□□□□□ -0.73
VAV3-205ENST00000479977 TMC2Q8TDI7 906 aa10.48□□□□□ -0.73
VAV3-205ENST00000479977 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
VAV3-205ENST00000479977 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
VAV3-205ENST00000479977 NUDT7P0C024 238 aa10.46□□□□□ -0.73
VAV3-205ENST00000479977 HS6ST3Q8IZP7 471 aa10.46□□□□□ -0.73
VAV3-205ENST00000479977 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
VAV3-205ENST00000479977 PPP1R37O75864 691 aa10.45□□□□□ -0.74
VAV3-205ENST00000479977 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
VAV3-205ENST00000479977 ANKRD13DQ6ZTN6 518 aa10.42□□□□□ -0.74
VAV3-205ENST00000479977 PCDHGA4Q9Y5G9 962 aa10.41□□□□□ -0.74
VAV3-205ENST00000479977 DNAJC5Q9H3Z4 198 aa10.39□□□□□ -0.75
VAV3-205ENST00000479977 LHX6Q9UPM6 363 aa10.39□□□□□ -0.75
VAV3-205ENST00000479977 SLC34A2O95436 690 aa10.36□□□□□ -0.75
VAV3-205ENST00000479977 LSM11P83369 360 aaKnown RBP eCLIP10.36□□□□□ -0.75
VAV3-205ENST00000479977 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
VAV3-205ENST00000479977 PTGER2P43116 358 aa10.34□□□□□ -0.75
VAV3-205ENST00000479977 AXIN2Q9Y2T1 843 aa10.34□□□□□ -0.75
VAV3-205ENST00000479977 PBX2P40425 430 aa10.31□□□□□ -0.76
VAV3-205ENST00000479977 BBXQ8WY36 941 aaPredicted RBP10.31□□□□□ -0.76
VAV3-205ENST00000479977 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
VAV3-205ENST00000479977 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
VAV3-205ENST00000479977 FOXK1P85037 733 aa10.28□□□□□ -0.76
VAV3-205ENST00000479977 DSG2Q14126 1118 aa10.27□□□□□ -0.77
VAV3-205ENST00000479977 GPHNQ9NQX3 736 aaPredicted RBP10.27□□□□□ -0.77
VAV3-205ENST00000479977 PTCD2Q8WV60 388 aaKnown RBP10.25□□□□□ -0.77
VAV3-205ENST00000479977 PSDA5PKW4 1024 aaPredicted RBP10.24□□□□□ -0.77
VAV3-205ENST00000479977 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
VAV3-205ENST00000479977 ARHGAP33O14559 1287 aa10.22□□□□□ -0.77
VAV3-205ENST00000479977 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.21□□□□□ -0.77
VAV3-205ENST00000479977 KDM4FA0A1W2PPD8 638 aa10.2□□□□□ -0.78
VAV3-205ENST00000479977 TBC1D12O60347 775 aa10.2□□□□□ -0.78
VAV3-205ENST00000479977 PSEN2P49810 448 aa10.2□□□□□ -0.78
VAV3-205ENST00000479977 ADGRD1Q6QNK2 874 aa10.2□□□□□ -0.78
VAV3-205ENST00000479977 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
VAV3-205ENST00000479977 RYDENQ9NUL5 291 aaKnown RBP10.2□□□□□ -0.78
VAV3-205ENST00000479977 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
VAV3-205ENST00000479977 DMRTA1Q5VZB9 504 aa10.17□□□□□ -0.78
VAV3-205ENST00000479977 PAXIP1Q6ZW49 1069 aaPredicted RBP10.16□□□□□ -0.78
VAV3-205ENST00000479977 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
VAV3-205ENST00000479977 PPP1R15BQ5SWA1 713 aa10.15□□□□□ -0.78
VAV3-205ENST00000479977 CFAP44Q96MT7 982 aa10.14□□□□□ -0.79
VAV3-205ENST00000479977 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
VAV3-205ENST00000479977 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
VAV3-205ENST00000479977 OXER1Q8TDS5 423 aa10.13□□□□□ -0.79
VAV3-205ENST00000479977 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
VAV3-205ENST00000479977 TK2O00142 265 aa10.11□□□□□ -0.79
VAV3-205ENST00000479977 ZNF454Q8N9F8 522 aa10.11□□□□□ -0.79
VAV3-205ENST00000479977 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
VAV3-205ENST00000479977 STAC3Q96MF2 364 aa10.1□□□□□ -0.79
VAV3-205ENST00000479977 HCSTQ9UBK5 93 aa10.1□□□□□ -0.79
VAV3-205ENST00000479977 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
VAV3-205ENST00000479977 HRO43593 1189 aa10.08□□□□□ -0.8
VAV3-205ENST00000479977 PDE4AP27815 886 aa10.08□□□□□ -0.8
VAV3-205ENST00000479977 KCTD12Q96CX2 325 aaKnown RBP10.08□□□□□ -0.8
VAV3-205ENST00000479977 PLA2G2EQ9NZK7 142 aa10.07□□□□□ -0.8
VAV3-205ENST00000479977 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
VAV3-205ENST00000479977 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
VAV3-205ENST00000479977 EVI5O60447 810 aa10.02□□□□□ -0.81
VAV3-205ENST00000479977 BCL2L12Q9HB09 334 aa10.02□□□□□ -0.81
VAV3-205ENST00000479977 VPS9D1Q9Y2B5 631 aa10.02□□□□□ -0.81
VAV3-205ENST00000479977 PTPREP23469 700 aa10.01□□□□□ -0.81
VAV3-205ENST00000479977 FOSBP53539 338 aa10.01□□□□□ -0.81
VAV3-205ENST00000479977 CADPS2Q86UW7 1296 aa10□□□□□ -0.81
VAV3-205ENST00000479977 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
VAV3-205ENST00000479977 JPH4Q96JJ6 628 aa9.99□□□□□ -0.81
VAV3-205ENST00000479977 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
VAV3-205ENST00000479977 PTPN5P54829 565 aa9.98□□□□□ -0.81
VAV3-205ENST00000479977 MFSD10Q14728 455 aa9.96□□□□□ -0.82
VAV3-205ENST00000479977 ZDHHC16Q969W1 377 aa9.96□□□□□ -0.82
VAV3-205ENST00000479977 ADAM33Q9BZ11 813 aa9.96□□□□□ -0.82
VAV3-205ENST00000479977 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
VAV3-205ENST00000479977 ZBED2Q9BTP6 218 aa9.94□□□□□ -0.82
VAV3-205ENST00000479977 ANO8Q9HCE9 1232 aaPredicted RBP9.94□□□□□ -0.82
VAV3-205ENST00000479977 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
VAV3-205ENST00000479977 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
VAV3-205ENST00000479977 MRPL50Q8N5N7 158 aaKnown RBP9.92□□□□□ -0.82
VAV3-205ENST00000479977 SLC4A5Q9BY07 1137 aa9.92□□□□□ -0.82
VAV3-205ENST00000479977 WNT2BQ93097 391 aa9.9□□□□□ -0.82
VAV3-205ENST00000479977 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
VAV3-205ENST00000479977 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms