RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ARHGAP5Q13017 1502 aa16.96■□□□□ 0.3
ATG4B-219ENST00000479941 GPATCH8Q9UKJ3 1502 aaKnown RBP16.95■□□□□ 0.3
ATG4B-219ENST00000479941 SUPT6HQ7KZ85 1726 aaKnown RBP16.94■□□□□ 0.3
ATG4B-219ENST00000479941 PREX2Q70Z35 1606 aa16.94■□□□□ 0.3
ATG4B-219ENST00000479941 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
ATG4B-219ENST00000479941 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
ATG4B-219ENST00000479941 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
ATG4B-219ENST00000479941 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-219ENST00000479941 DENND4BO75064 1496 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-219ENST00000479941 ADGRL1O94910 1474 aa16.92■□□□□ 0.3
ATG4B-219ENST00000479941 SCAPERQ9BY12 1400 aa16.9■□□□□ 0.3
ATG4B-219ENST00000479941 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
ATG4B-219ENST00000479941 ITSN2Q9NZM3 1697 aa16.88■□□□□ 0.29
ATG4B-219ENST00000479941 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-219ENST00000479941 POGZQ7Z3K3 1410 aa16.85■□□□□ 0.29
ATG4B-219ENST00000479941 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
ATG4B-219ENST00000479941 ABCC1P33527 1531 aa16.84■□□□□ 0.29
ATG4B-219ENST00000479941 FRMPD1Q5SYB0 1578 aa16.84■□□□□ 0.29
ATG4B-219ENST00000479941 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
ATG4B-219ENST00000479941 ZNF518AQ6AHZ1 1483 aa16.83■□□□□ 0.28
ATG4B-219ENST00000479941 SAMD9LQ8IVG5 1584 aa16.83■□□□□ 0.28
ATG4B-219ENST00000479941 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.28
ATG4B-219ENST00000479941 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
ATG4B-219ENST00000479941 ARHGEF12Q9NZN5 1544 aa16.81■□□□□ 0.28
ATG4B-219ENST00000479941 MIA2Q96PC5 1412 aa16.81■□□□□ 0.28
ATG4B-219ENST00000479941 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
ATG4B-219ENST00000479941 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
ATG4B-219ENST00000479941 AFAP1Q8N556 730 aa16.8■□□□□ 0.28
ATG4B-219ENST00000479941 ZNF644Q9H582 1327 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-219ENST00000479941 HNRNPMP52272 730 aaKnown RBP eCLIP16.79■□□□□ 0.28
ATG4B-219ENST00000479941 SYCP2Q9BX26 1530 aa16.79■□□□□ 0.28
ATG4B-219ENST00000479941 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
ATG4B-219ENST00000479941 KDM5CP41229 1560 aa16.78■□□□□ 0.28
ATG4B-219ENST00000479941 CAMSAP2Q08AD1 1489 aa16.76■□□□□ 0.27
ATG4B-219ENST00000479941 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
ATG4B-219ENST00000479941 MBD5Q9P267 1494 aa16.75■□□□□ 0.27
ATG4B-219ENST00000479941 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
ATG4B-219ENST00000479941 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
ATG4B-219ENST00000479941 FGD6Q6ZV73 1430 aa16.73■□□□□ 0.27
ATG4B-219ENST00000479941 MYT1LQ9UL68 1186 aa16.73■□□□□ 0.27
ATG4B-219ENST00000479941 ARHGEF40Q8TER5 1519 aa16.73■□□□□ 0.27
ATG4B-219ENST00000479941 HECW2Q9P2P5 1572 aa16.72■□□□□ 0.27
ATG4B-219ENST00000479941 YEATS2Q9ULM3 1422 aa16.72■□□□□ 0.27
ATG4B-219ENST00000479941 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
ATG4B-219ENST00000479941 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
ATG4B-219ENST00000479941 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
ATG4B-219ENST00000479941 ARHGEF5Q12774 1597 aa16.69■□□□□ 0.26
ATG4B-219ENST00000479941 ATP10AO60312 1499 aa16.69■□□□□ 0.26
ATG4B-219ENST00000479941 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
ATG4B-219ENST00000479941 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
ATG4B-219ENST00000479941 TSPY4P0CV99 314 aa16.68■□□□□ 0.26
ATG4B-219ENST00000479941 TSPY10P0CW01 314 aa16.68■□□□□ 0.26
ATG4B-219ENST00000479941 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
ATG4B-219ENST00000479941 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
ATG4B-219ENST00000479941 KIDINS220Q9ULH0 1771 aa16.66■□□□□ 0.26
ATG4B-219ENST00000479941 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
ATG4B-219ENST00000479941 DIP2CQ9Y2E4 1556 aa16.66■□□□□ 0.26
ATG4B-219ENST00000479941 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-219ENST00000479941 INO80Q9ULG1 1556 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-219ENST00000479941 ABCA6Q8N139 1617 aa16.64■□□□□ 0.25
ATG4B-219ENST00000479941 REREQ9P2R6 1566 aa16.63■□□□□ 0.25
ATG4B-219ENST00000479941 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
ATG4B-219ENST00000479941 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
ATG4B-219ENST00000479941 ABCC5O15440 1437 aa16.61■□□□□ 0.25
ATG4B-219ENST00000479941 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
ATG4B-219ENST00000479941 DAPK1P53355 1430 aa16.6■□□□□ 0.25
ATG4B-219ENST00000479941 SHANK2Q9UPX8 1470 aa16.6■□□□□ 0.25
ATG4B-219ENST00000479941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.25
ATG4B-219ENST00000479941 DNMT1P26358 1616 aaKnown RBP16.59■□□□□ 0.25
ATG4B-219ENST00000479941 A2MP01023 1474 aa16.58■□□□□ 0.24
ATG4B-219ENST00000479941 AGLP35573 1532 aa16.58■□□□□ 0.24
ATG4B-219ENST00000479941 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
ATG4B-219ENST00000479941 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
ATG4B-219ENST00000479941 ADGBQ8N7X0 1667 aa16.56■□□□□ 0.24
ATG4B-219ENST00000479941 RRBP1Q9P2E9 1410 aaKnown RBP16.56■□□□□ 0.24
ATG4B-219ENST00000479941 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
ATG4B-219ENST00000479941 CROCC2H7BZ55 1655 aa16.55■□□□□ 0.24
ATG4B-219ENST00000479941 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
ATG4B-219ENST00000479941 MLECQ14165 292 aa16.54■□□□□ 0.24
ATG4B-219ENST00000479941 ADAMTSL3P82987 1691 aa16.53■□□□□ 0.24
ATG4B-219ENST00000479941 CHIC2Q9UKJ5 165 aa16.52■□□□□ 0.24
ATG4B-219ENST00000479941 ANKRD30AQ9BXX3 1397 aa16.51■□□□□ 0.23
ATG4B-219ENST00000479941 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-219ENST00000479941 NCOA1Q15788 1441 aa16.5■□□□□ 0.23
ATG4B-219ENST00000479941 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
ATG4B-219ENST00000479941 ADGRL2O95490 1459 aa16.49■□□□□ 0.23
ATG4B-219ENST00000479941 RRP7BPQ9NSQ0 103 aa16.49■□□□□ 0.23
ATG4B-219ENST00000479941 DUOX2Q9NRD8 1548 aa16.49■□□□□ 0.23
ATG4B-219ENST00000479941 MADDQ8WXG6 1647 aa16.48■□□□□ 0.23
ATG4B-219ENST00000479941 PTPRKQ15262 1439 aa16.48■□□□□ 0.23
ATG4B-219ENST00000479941 KIF3BO15066 747 aa16.47■□□□□ 0.23
ATG4B-219ENST00000479941 ITGAEP38570 1179 aa16.47■□□□□ 0.23
ATG4B-219ENST00000479941 GGT6Q6P531 493 aa16.47■□□□□ 0.23
ATG4B-219ENST00000479941 ESF1Q9H501 851 aaKnown RBP16.47■□□□□ 0.23
ATG4B-219ENST00000479941 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
ATG4B-219ENST00000479941 ROCK1Q13464 1354 aa16.46■□□□□ 0.23
ATG4B-219ENST00000479941 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
ATG4B-219ENST00000479941 PTPRMP28827 1452 aa16.45■□□□□ 0.22
ATG4B-219ENST00000479941 FER1L4A9Z1Z3 1794 aa16.44■□□□□ 0.22
ATG4B-219ENST00000479941 EIF2AK4Q9P2K8 1649 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms