RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 FAM69CQ0P6D2 419 aa19.38■□□□□ 0.69
TRAPPC12-218ENST00000479897 ARHGAP5Q13017 1502 aa19.38■□□□□ 0.69
TRAPPC12-218ENST00000479897 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
TRAPPC12-218ENST00000479897 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
TRAPPC12-218ENST00000479897 PTPN23Q9H3S7 1636 aa19.36■□□□□ 0.69
TRAPPC12-218ENST00000479897 TCOF1Q13428 1488 aaKnown RBP19.36■□□□□ 0.69
TRAPPC12-218ENST00000479897 SAMD9LQ8IVG5 1584 aa19.36■□□□□ 0.69
TRAPPC12-218ENST00000479897 TEX14Q8IWB6 1497 aa19.35■□□□□ 0.69
TRAPPC12-218ENST00000479897 TSPOAP1O95153 1857 aa19.35■□□□□ 0.69
TRAPPC12-218ENST00000479897 FANCAO15360 1455 aa19.35■□□□□ 0.69
TRAPPC12-218ENST00000479897 NEO1Q92859 1461 aa19.35■□□□□ 0.69
TRAPPC12-218ENST00000479897 ABCC1P33527 1531 aa19.33■□□□□ 0.68
TRAPPC12-218ENST00000479897 CAMSAP2Q08AD1 1489 aa19.32■□□□□ 0.68
TRAPPC12-218ENST00000479897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.32■□□□□ 0.686e-6■■■□□ 18.9
TRAPPC12-218ENST00000479897 PLEKHH2Q8IVE3 1493 aa19.31■□□□□ 0.68
TRAPPC12-218ENST00000479897 CFDP1Q9UEE9 299 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-218ENST00000479897 ARHGEF5Q12774 1597 aa19.28■□□□□ 0.68
TRAPPC12-218ENST00000479897 KIAA1107Q9UPP5 1409 aa19.28■□□□□ 0.68
TRAPPC12-218ENST00000479897 EFCAB2Q5VUJ9 269 aa19.28■□□□□ 0.68
TRAPPC12-218ENST00000479897 AKNAQ7Z591 1439 aa19.26■□□□□ 0.67
TRAPPC12-218ENST00000479897 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
TRAPPC12-218ENST00000479897 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
TRAPPC12-218ENST00000479897 CROCC2H7BZ55 1655 aa19.25■□□□□ 0.67
TRAPPC12-218ENST00000479897 ADGRL1O94910 1474 aa19.25■□□□□ 0.67
TRAPPC12-218ENST00000479897 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC12-218ENST00000479897 MBD5Q9P267 1494 aa19.23■□□□□ 0.67
TRAPPC12-218ENST00000479897 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
TRAPPC12-218ENST00000479897 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
TRAPPC12-218ENST00000479897 KDM5CP41229 1560 aa19.2■□□□□ 0.66
TRAPPC12-218ENST00000479897 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
TRAPPC12-218ENST00000479897 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC12-218ENST00000479897 POGZQ7Z3K3 1410 aa19.19■□□□□ 0.66
TRAPPC12-218ENST00000479897 SHANK2Q9UPX8 1470 aa19.19■□□□□ 0.66
TRAPPC12-218ENST00000479897 FRMPD1Q5SYB0 1578 aa19.19■□□□□ 0.66
TRAPPC12-218ENST00000479897 SCAPERQ9BY12 1400 aa19.18■□□□□ 0.66
TRAPPC12-218ENST00000479897 ZNF518AQ6AHZ1 1483 aa19.18■□□□□ 0.66
TRAPPC12-218ENST00000479897 ZNF777Q9ULD5 760 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC12-218ENST00000479897 MAST1Q9Y2H9 1570 aa19.18■□□□□ 0.66
TRAPPC12-218ENST00000479897 DAPK1P53355 1430 aa19.17■□□□□ 0.66
TRAPPC12-218ENST00000479897 DENND4BO75064 1496 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC12-218ENST00000479897 ZMYM4Q5VZL5 1548 aa19.16■□□□□ 0.66
TRAPPC12-218ENST00000479897 RSPH4AQ5TD94 716 aa19.15■□□□□ 0.66
TRAPPC12-218ENST00000479897 ABCC5O15440 1437 aa19.15■□□□□ 0.66
TRAPPC12-218ENST00000479897 TRAPPC8Q9Y2L5 1435 aa19.15■□□□□ 0.66
TRAPPC12-218ENST00000479897 INO80Q9ULG1 1556 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC12-218ENST00000479897 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.66
TRAPPC12-218ENST00000479897 KDM6BO15054 1643 aa19.14■□□□□ 0.65
TRAPPC12-218ENST00000479897 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
TRAPPC12-218ENST00000479897 HECW2Q9P2P5 1572 aa19.12■□□□□ 0.65
TRAPPC12-218ENST00000479897 ZFYVE16Q7Z3T8 1539 aa19.12■□□□□ 0.65
TRAPPC12-218ENST00000479897 PLXNC1O60486 1568 aa19.11■□□□□ 0.65
TRAPPC12-218ENST00000479897 ADGRL2O95490 1459 aa19.11■□□□□ 0.65
TRAPPC12-218ENST00000479897 COL17A1Q9UMD9 1497 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC12-218ENST00000479897 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRAPPC12-218ENST00000479897 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC12-218ENST00000479897 RTEL1-TNFRSF6BF6WH68 1400 aa19.09■□□□□ 0.65
TRAPPC12-218ENST00000479897 ATP7AQ04656 1500 aa19.09■□□□□ 0.65
TRAPPC12-218ENST00000479897 MLH3Q9UHC1 1453 aa19.09■□□□□ 0.65
TRAPPC12-218ENST00000479897 KIDINS220Q9ULH0 1771 aa19.09■□□□□ 0.65
TRAPPC12-218ENST00000479897 PTPRKQ15262 1439 aa19.08■□□□□ 0.65
TRAPPC12-218ENST00000479897 C9orf84Q5VXU9 1444 aa19.08■□□□□ 0.65
TRAPPC12-218ENST00000479897 MAGI2Q86UL8 1455 aa19.07■□□□□ 0.64
TRAPPC12-218ENST00000479897 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
TRAPPC12-218ENST00000479897 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
TRAPPC12-218ENST00000479897 ARHGEF40Q8TER5 1519 aa19.04■□□□□ 0.64
TRAPPC12-218ENST00000479897 AFAP1Q8N556 730 aa19.03■□□□□ 0.64
TRAPPC12-218ENST00000479897 ABCA6Q8N139 1617 aa19.03■□□□□ 0.64
TRAPPC12-218ENST00000479897 TSPY4P0CV99 314 aa19.02■□□□□ 0.64
TRAPPC12-218ENST00000479897 TSPY10P0CW01 314 aa19.02■□□□□ 0.64
TRAPPC12-218ENST00000479897 DIP2CQ9Y2E4 1556 aa19.02■□□□□ 0.63
TRAPPC12-218ENST00000479897 SPAG9O60271 1321 aaKnown RBP19.01■□□□□ 0.63
TRAPPC12-218ENST00000479897 RAPGEF3O95398 923 aa19.01■□□□□ 0.63
TRAPPC12-218ENST00000479897 NCOA1Q15788 1441 aa19■□□□□ 0.63
TRAPPC12-218ENST00000479897 REREQ9P2R6 1566 aa19■□□□□ 0.63
TRAPPC12-218ENST00000479897 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
TRAPPC12-218ENST00000479897 HFM1A2PYH4 1435 aa18.99■□□□□ 0.63
TRAPPC12-218ENST00000479897 DUOX2Q9NRD8 1548 aa18.97■□□□□ 0.63
TRAPPC12-218ENST00000479897 EIF2AK4Q9P2K8 1649 aaKnown RBP18.96■□□□□ 0.63
TRAPPC12-218ENST00000479897 BCORL1Q5H9F3 1711 aa18.95■□□□□ 0.62
TRAPPC12-218ENST00000479897 YEATS2Q9ULM3 1422 aa18.95■□□□□ 0.62
TRAPPC12-218ENST00000479897 ITGAEP38570 1179 aa18.95■□□□□ 0.62
TRAPPC12-218ENST00000479897 KIF15Q9NS87 1388 aa18.94■□□□□ 0.62
TRAPPC12-218ENST00000479897 NAIPQ13075 1403 aa18.94■□□□□ 0.62
TRAPPC12-218ENST00000479897 ERBINQ96RT1 1412 aa18.93■□□□□ 0.62
TRAPPC12-218ENST00000479897 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
TRAPPC12-218ENST00000479897 ATP10AO60312 1499 aa18.91■□□□□ 0.62
TRAPPC12-218ENST00000479897 A2MP01023 1474 aa18.9■□□□□ 0.62
TRAPPC12-218ENST00000479897 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
TRAPPC12-218ENST00000479897 AGLP35573 1532 aa18.89■□□□□ 0.61
TRAPPC12-218ENST00000479897 ANKRD50Q9ULJ7 1429 aa18.88■□□□□ 0.61
TRAPPC12-218ENST00000479897 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
TRAPPC12-218ENST00000479897 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
TRAPPC12-218ENST00000479897 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
TRAPPC12-218ENST00000479897 SIGLEC1Q9BZZ2 1709 aa18.86■□□□□ 0.61
TRAPPC12-218ENST00000479897 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
TRAPPC12-218ENST00000479897 UNC13BO14795 1591 aa18.85■□□□□ 0.61
TRAPPC12-218ENST00000479897 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
TRAPPC12-218ENST00000479897 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
TRAPPC12-218ENST00000479897 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC12-218ENST00000479897 MROH1Q8NDA8 1641 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms