RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 CCDC18Q5T9S5 1454 aa14.53□□□□□ -0.08
CMTM1-208ENST00000479381 NEO1Q92859 1461 aa14.53□□□□□ -0.08
CMTM1-208ENST00000479381 PHLDB1Q86UU1 1377 aa14.53□□□□□ -0.08
CMTM1-208ENST00000479381 FANCAO15360 1455 aa14.52□□□□□ -0.08
CMTM1-208ENST00000479381 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.09
CMTM1-208ENST00000479381 CASKIN1Q8WXD9 1431 aa14.51□□□□□ -0.09
CMTM1-208ENST00000479381 RAPGEF3O95398 923 aa14.51□□□□□ -0.09
CMTM1-208ENST00000479381 MYO5CQ9NQX4 1742 aa14.51□□□□□ -0.09
CMTM1-208ENST00000479381 ADGRL1O94910 1474 aa14.5□□□□□ -0.09
CMTM1-208ENST00000479381 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
CMTM1-208ENST00000479381 CACNB1Q02641 598 aaPredicted RBP14.5□□□□□ -0.09
CMTM1-208ENST00000479381 ARAP3Q8WWN8 1544 aa14.5□□□□□ -0.09
CMTM1-208ENST00000479381 FYCO1Q9BQS8 1478 aa14.5□□□□□ -0.09
CMTM1-208ENST00000479381 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
CMTM1-208ENST00000479381 LRRIQ1Q96JM4 1722 aa14.49□□□□□ -0.09
CMTM1-208ENST00000479381 CEP162Q5TB80 1403 aa14.49□□□□□ -0.09
CMTM1-208ENST00000479381 AKNAQ7Z591 1439 aa14.49□□□□□ -0.09
CMTM1-208ENST00000479381 ARHGAP5Q13017 1502 aa14.48□□□□□ -0.09
CMTM1-208ENST00000479381 DENND4BO75064 1496 aaPredicted RBP14.48□□□□□ -0.09
CMTM1-208ENST00000479381 KDM4FA0A1W2PPD8 638 aa14.47□□□□□ -0.09
CMTM1-208ENST00000479381 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
CMTM1-208ENST00000479381 EFCAB2Q5VUJ9 269 aa14.46□□□□□ -0.09
CMTM1-208ENST00000479381 LOC105371045A0A1W2PR82 267 aa14.45□□□□□ -0.1
CMTM1-208ENST00000479381 PLCH2O75038 1416 aa14.44□□□□□ -0.1
CMTM1-208ENST00000479381 MTUS2Q5JR59 1369 aa14.43□□□□□ -0.1
CMTM1-208ENST00000479381 SCAPERQ9BY12 1400 aa14.42□□□□□ -0.1
CMTM1-208ENST00000479381 ZNF777Q9ULD5 760 aaPredicted RBP14.42□□□□□ -0.1
CMTM1-208ENST00000479381 RICTORQ6R327 1708 aa14.41□□□□□ -0.1
CMTM1-208ENST00000479381 FRMPD1Q5SYB0 1578 aa14.4□□□□□ -0.1
CMTM1-208ENST00000479381 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
CMTM1-208ENST00000479381 ZFYVE16Q7Z3T8 1539 aa14.39□□□□□ -0.11
CMTM1-208ENST00000479381 ARHGEF40Q8TER5 1519 aa14.38□□□□□ -0.11
CMTM1-208ENST00000479381 PREX2Q70Z35 1606 aa14.37□□□□□ -0.11
CMTM1-208ENST00000479381 POGZQ7Z3K3 1410 aa14.37□□□□□ -0.11
CMTM1-208ENST00000479381 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
CMTM1-208ENST00000479381 CDC42BPBQ9Y5S2 1711 aa14.36□□□□□ -0.11
CMTM1-208ENST00000479381 MLECQ14165 292 aa14.36□□□□□ -0.11
CMTM1-208ENST00000479381 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
CMTM1-208ENST00000479381 CDC42BPAQ5VT25 1732 aa14.35□□□□□ -0.11
CMTM1-208ENST00000479381 ZNF518AQ6AHZ1 1483 aa14.34□□□□□ -0.11
CMTM1-208ENST00000479381 APLP2Q06481 763 aa14.34□□□□□ -0.11
CMTM1-208ENST00000479381 EHBP1L1Q8N3D4 1523 aa14.34□□□□□ -0.11
CMTM1-208ENST00000479381 ZMYM4Q5VZL5 1548 aa14.33□□□□□ -0.12
CMTM1-208ENST00000479381 CFDP1Q9UEE9 299 aaPredicted RBP14.33□□□□□ -0.12
CMTM1-208ENST00000479381 YEATS2Q9ULM3 1422 aa14.32□□□□□ -0.12
CMTM1-208ENST00000479381 MAGI2Q86UL8 1455 aa14.31□□□□□ -0.12
CMTM1-208ENST00000479381 AFAP1Q8N556 730 aa14.31□□□□□ -0.12
CMTM1-208ENST00000479381 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
CMTM1-208ENST00000479381 ITSN2Q9NZM3 1697 aa14.3□□□□□ -0.12
CMTM1-208ENST00000479381 BCORL1Q5H9F3 1711 aa14.3□□□□□ -0.12
CMTM1-208ENST00000479381 ABCC1P33527 1531 aa14.3□□□□□ -0.12
CMTM1-208ENST00000479381 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
CMTM1-208ENST00000479381 MADDQ8WXG6 1647 aa14.29□□□□□ -0.12
CMTM1-208ENST00000479381 RIMS1Q86UR5 1692 aaKnown RBP14.29□□□□□ -0.12
CMTM1-208ENST00000479381 SUPT6HQ7KZ85 1726 aaKnown RBP14.29□□□□□ -0.12
CMTM1-208ENST00000479381 C9orf84Q5VXU9 1444 aa14.28□□□□□ -0.12
CMTM1-208ENST00000479381 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
CMTM1-208ENST00000479381 GPATCH8Q9UKJ3 1502 aaKnown RBP14.27□□□□□ -0.12
CMTM1-208ENST00000479381 ESF1Q9H501 851 aaKnown RBP14.27□□□□□ -0.13
CMTM1-208ENST00000479381 TIAM1Q13009 1591 aa14.26□□□□□ -0.13
CMTM1-208ENST00000479381 ATP10AO60312 1499 aa14.26□□□□□ -0.13
CMTM1-208ENST00000479381 HNRNPMP52272 730 aaKnown RBP eCLIP14.26□□□□□ -0.13
CMTM1-208ENST00000479381 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
CMTM1-208ENST00000479381 SAMD9LQ8IVG5 1584 aa14.26□□□□□ -0.13
CMTM1-208ENST00000479381 PLEKHH2Q8IVE3 1493 aa14.25□□□□□ -0.13
CMTM1-208ENST00000479381 TRAPPC8Q9Y2L5 1435 aa14.25□□□□□ -0.13
CMTM1-208ENST00000479381 FER1L4A9Z1Z3 1794 aa14.24□□□□□ -0.13
CMTM1-208ENST00000479381 SPAG9O60271 1321 aaKnown RBP14.24□□□□□ -0.13
CMTM1-208ENST00000479381 KDM5CP41229 1560 aa14.24□□□□□ -0.13
CMTM1-208ENST00000479381 PTPRMP28827 1452 aa14.24□□□□□ -0.13
CMTM1-208ENST00000479381 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
CMTM1-208ENST00000479381 ARHGEF12Q9NZN5 1544 aa14.22□□□□□ -0.13
CMTM1-208ENST00000479381 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
CMTM1-208ENST00000479381 ABCA6Q8N139 1617 aa14.22□□□□□ -0.13
CMTM1-208ENST00000479381 DIP2CQ9Y2E4 1556 aa14.22□□□□□ -0.13
CMTM1-208ENST00000479381 MLH3Q9UHC1 1453 aa14.19□□□□□ -0.14
CMTM1-208ENST00000479381 SIGLEC1Q9BZZ2 1709 aa14.19□□□□□ -0.14
CMTM1-208ENST00000479381 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
CMTM1-208ENST00000479381 MYCNP04198 464 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-208ENST00000479381 ZNF644Q9H582 1327 aaPredicted RBP14.17□□□□□ -0.14
CMTM1-208ENST00000479381 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
CMTM1-208ENST00000479381 ATP7AQ04656 1500 aa14.17□□□□□ -0.14
CMTM1-208ENST00000479381 KIAA1107Q9UPP5 1409 aa14.16□□□□□ -0.14
CMTM1-208ENST00000479381 CAMSAP2Q08AD1 1489 aa14.16□□□□□ -0.14
CMTM1-208ENST00000479381 KANK4Q5T7N3 995 aaPredicted RBP14.14□□□□□ -0.15
CMTM1-208ENST00000479381 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
CMTM1-208ENST00000479381 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
CMTM1-208ENST00000479381 TSPY4P0CV99 314 aa14.13□□□□□ -0.15
CMTM1-208ENST00000479381 TSPY10P0CW01 314 aa14.13□□□□□ -0.15
CMTM1-208ENST00000479381 REREQ9P2R6 1566 aa14.13□□□□□ -0.15
CMTM1-208ENST00000479381 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
CMTM1-208ENST00000479381 GGT6Q6P531 493 aa14.12□□□□□ -0.15
CMTM1-208ENST00000479381 INO80Q9ULG1 1556 aaPredicted RBP14.12□□□□□ -0.15
CMTM1-208ENST00000479381 A2MP01023 1474 aa14.12□□□□□ -0.15
CMTM1-208ENST00000479381 CAPN15O75808 1086 aa14.11□□□□□ -0.15
CMTM1-208ENST00000479381 CEBPAP49715 358 aaPredicted RBP14.11□□□□□ -0.15
CMTM1-208ENST00000479381 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
CMTM1-208ENST00000479381 AGLP35573 1532 aa14.1□□□□□ -0.15
CMTM1-208ENST00000479381 RSPH4AQ5TD94 716 aa14.09□□□□□ -0.15
CMTM1-208ENST00000479381 MYOM3Q5VTT5 1437 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms