RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
RFC4-212ENST00000479307 IRX5P78411 483 aaPredicted RBP11.2□□□□□ -0.62
RFC4-212ENST00000479307 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
RFC4-212ENST00000479307 LARP6Q9BRS8 491 aaKnown RBP11.2□□□□□ -0.62
RFC4-212ENST00000479307 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
RFC4-212ENST00000479307 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
RFC4-212ENST00000479307 TPRNQ4KMQ1 711 aa11.18□□□□□ -0.62
RFC4-212ENST00000479307 PLCG2P16885 1265 aa11.15□□□□□ -0.62
RFC4-212ENST00000479307 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
RFC4-212ENST00000479307 MICALL2Q8IY33 904 aa11.15□□□□□ -0.62
RFC4-212ENST00000479307 GPHNQ9NQX3 736 aaPredicted RBP11.15□□□□□ -0.62
RFC4-212ENST00000479307 G3V3G9 751 aa11.13□□□□□ -0.63
RFC4-212ENST00000479307 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
RFC4-212ENST00000479307 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
RFC4-212ENST00000479307 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
RFC4-212ENST00000479307 BOLA1Q9Y3E2 137 aa11.13□□□□□ -0.63
RFC4-212ENST00000479307 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
RFC4-212ENST00000479307 CAMK2BQ13554 666 aa11.11□□□□□ -0.63
RFC4-212ENST00000479307 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
RFC4-212ENST00000479307 ARIH1Q9Y4X5 557 aaPredicted RBP11.11□□□□□ -0.63
RFC4-212ENST00000479307 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
RFC4-212ENST00000479307 SEC24BO95487 1268 aa11.09□□□□□ -0.63
RFC4-212ENST00000479307 PPP1R15BQ5SWA1 713 aa11.09□□□□□ -0.63
RFC4-212ENST00000479307 TMC2Q8TDI7 906 aa11.08□□□□□ -0.64
RFC4-212ENST00000479307 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
RFC4-212ENST00000479307 POTEFA5A3E0 1075 aa11.05□□□□□ -0.64
RFC4-212ENST00000479307 FOXK1P85037 733 aa11.05□□□□□ -0.64
RFC4-212ENST00000479307 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
RFC4-212ENST00000479307 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
RFC4-212ENST00000479307 DSG2Q14126 1118 aa11.02□□□□□ -0.65
RFC4-212ENST00000479307 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
RFC4-212ENST00000479307 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
RFC4-212ENST00000479307 KIF3CO14782 793 aa11□□□□□ -0.65
RFC4-212ENST00000479307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
RFC4-212ENST00000479307 C2orf72A6NCS6 295 aa10.99□□□□□ -0.65
RFC4-212ENST00000479307 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
RFC4-212ENST00000479307 SEMA3EO15041 775 aa10.98□□□□□ -0.65
RFC4-212ENST00000479307 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
RFC4-212ENST00000479307 PLPP6Q8IY26 295 aa10.96□□□□□ -0.65
RFC4-212ENST00000479307 EMILIN3Q9NT22 766 aa10.94□□□□□ -0.66
RFC4-212ENST00000479307 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
RFC4-212ENST00000479307 C3orf67Q6ZVT6 689 aa10.92□□□□□ -0.66
RFC4-212ENST00000479307 DPYSL4O14531 572 aa10.91□□□□□ -0.66
RFC4-212ENST00000479307 PDIA6Q15084 440 aa10.91□□□□□ -0.66
RFC4-212ENST00000479307 TMEM92Q6UXU6 159 aa10.91□□□□□ -0.66
RFC4-212ENST00000479307 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
RFC4-212ENST00000479307 CDAN1Q8IWY9 1227 aa10.83□□□□□ -0.68
RFC4-212ENST00000479307 SLAIN1Q8ND83 568 aa10.83□□□□□ -0.68
RFC4-212ENST00000479307 OXER1Q8TDS5 423 aa10.83□□□□□ -0.68
RFC4-212ENST00000479307 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
RFC4-212ENST00000479307 MLLT3P42568 568 aaPredicted RBP10.82□□□□□ -0.68
RFC4-212ENST00000479307 ZC3H15Q8WU90 426 aaKnown RBP10.82□□□□□ -0.68
RFC4-212ENST00000479307 TBC1D12O60347 775 aa10.8□□□□□ -0.68
RFC4-212ENST00000479307 SLC34A2O95436 690 aa10.79□□□□□ -0.68
RFC4-212ENST00000479307 PTCD2Q8WV60 388 aaKnown RBP10.79□□□□□ -0.68
RFC4-212ENST00000479307 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
RFC4-212ENST00000479307 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
RFC4-212ENST00000479307 ST18O60284 1047 aa10.76□□□□□ -0.69
RFC4-212ENST00000479307 PTGER2P43116 358 aa10.76□□□□□ -0.69
RFC4-212ENST00000479307 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
RFC4-212ENST00000479307 GPIHBP1Q8IV16 184 aa10.75□□□□□ -0.69
RFC4-212ENST00000479307 ZMYND10O75800 440 aa10.74□□□□□ -0.69
RFC4-212ENST00000479307 EVI5O60447 810 aa10.72□□□□□ -0.69
RFC4-212ENST00000479307 GRXCR2A6NFK2 248 aa10.71□□□□□ -0.69
RFC4-212ENST00000479307 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
RFC4-212ENST00000479307 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
RFC4-212ENST00000479307 OSBPP22059 807 aa10.67□□□□□ -0.7
RFC4-212ENST00000479307 SLC24A3Q9HC58 644 aa10.66□□□□□ -0.7
RFC4-212ENST00000479307 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
RFC4-212ENST00000479307 DDX12PQ92771 950 aa10.65□□□□□ -0.7
RFC4-212ENST00000479307 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
RFC4-212ENST00000479307 GPR37O15354 613 aa10.62□□□□□ -0.71
RFC4-212ENST00000479307 PHF14O94880 888 aa10.62□□□□□ -0.71
RFC4-212ENST00000479307 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
RFC4-212ENST00000479307 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
RFC4-212ENST00000479307 EPAS1Q99814 870 aa10.61□□□□□ -0.71
RFC4-212ENST00000479307 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
RFC4-212ENST00000479307 RIMBP2O15034 1052 aa10.6□□□□□ -0.71
RFC4-212ENST00000479307 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
RFC4-212ENST00000479307 AK7Q96M32 723 aa10.6□□□□□ -0.71
RFC4-212ENST00000479307 KDM4FA0A1W2PPD8 638 aa10.58□□□□□ -0.72
RFC4-212ENST00000479307 FCHSD2O94868 740 aa10.58□□□□□ -0.72
RFC4-212ENST00000479307 HIC1Q14526 733 aa10.58□□□□□ -0.72
RFC4-212ENST00000479307 SNPHO15079 494 aa10.57□□□□□ -0.72
RFC4-212ENST00000479307 BRPF1P55201 1214 aaPredicted RBP10.57□□□□□ -0.72
RFC4-212ENST00000479307 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
RFC4-212ENST00000479307 GNPATO15228 680 aa10.56□□□□□ -0.72
RFC4-212ENST00000479307 HOXB3P14651 431 aaPredicted RBP10.56□□□□□ -0.72
RFC4-212ENST00000479307 MMRN1Q13201 1228 aa10.56□□□□□ -0.72
RFC4-212ENST00000479307 FBXW7Q969H0 707 aa10.56□□□□□ -0.72
RFC4-212ENST00000479307 JPH4Q96JJ6 628 aa10.56□□□□□ -0.72
RFC4-212ENST00000479307 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
RFC4-212ENST00000479307 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
RFC4-212ENST00000479307 SPNS2Q8IVW8 549 aa10.55□□□□□ -0.72
RFC4-212ENST00000479307 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
RFC4-212ENST00000479307 MINK1Q8N4C8 1332 aaPredicted RBP10.55□□□□□ -0.72
RFC4-212ENST00000479307 PRIM1P49642 420 aaKnown RBP10.54□□□□□ -0.72
RFC4-212ENST00000479307 MAP2K5Q13163 448 aa10.54□□□□□ -0.72
RFC4-212ENST00000479307 PTGDRQ13258 359 aa10.54□□□□□ -0.72
RFC4-212ENST00000479307 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms