RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
FXR1-213ENST00000479176 MAGI3Q5TCQ9 1506 aa17.2■□□□□ 0.34
FXR1-213ENST00000479176 CLIP1P30622 1438 aa17.19■□□□□ 0.34
FXR1-213ENST00000479176 CDK13Q14004 1512 aaKnown RBP17.18■□□□□ 0.34
FXR1-213ENST00000479176 CD109Q6YHK3 1445 aa17.18■□□□□ 0.34
FXR1-213ENST00000479176 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
FXR1-213ENST00000479176 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
FXR1-213ENST00000479176 CASKIN1Q8WXD9 1431 aa17.14■□□□□ 0.33
FXR1-213ENST00000479176 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
FXR1-213ENST00000479176 COL17A1Q9UMD9 1497 aaPredicted RBP17.12■□□□□ 0.33
FXR1-213ENST00000479176 CEP162Q5TB80 1403 aa17.1■□□□□ 0.33
FXR1-213ENST00000479176 FYCO1Q9BQS8 1478 aa17.1■□□□□ 0.33
FXR1-213ENST00000479176 POLA2Q14181 598 aa17.09■□□□□ 0.33
FXR1-213ENST00000479176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.09■□□□□ 0.33
FXR1-213ENST00000479176 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.32
FXR1-213ENST00000479176 CCDC18Q5T9S5 1454 aa17.07■□□□□ 0.32
FXR1-213ENST00000479176 ATP1B4Q9UN42 357 aaPredicted RBP17.07■□□□□ 0.32
FXR1-213ENST00000479176 ABCB7O75027 752 aa17.05■□□□□ 0.32
FXR1-213ENST00000479176 ARAP3Q8WWN8 1544 aa17.05■□□□□ 0.32
FXR1-213ENST00000479176 NEO1Q92859 1461 aa17.05■□□□□ 0.32
FXR1-213ENST00000479176 PHLDB1Q86UU1 1377 aa17.04■□□□□ 0.32
FXR1-213ENST00000479176 LOC105371045A0A1W2PR82 267 aa17.04■□□□□ 0.32
FXR1-213ENST00000479176 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
FXR1-213ENST00000479176 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
FXR1-213ENST00000479176 KIF14Q15058 1648 aa17.03■□□□□ 0.32
FXR1-213ENST00000479176 DSG3P32926 999 aa17.02■□□□□ 0.32
FXR1-213ENST00000479176 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
FXR1-213ENST00000479176 MYO5CQ9NQX4 1742 aa16.99■□□□□ 0.31
FXR1-213ENST00000479176 PLCH2O75038 1416 aa16.97■□□□□ 0.31
FXR1-213ENST00000479176 FANCAO15360 1455 aa16.97■□□□□ 0.31
FXR1-213ENST00000479176 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
FXR1-213ENST00000479176 AKNAQ7Z591 1439 aa16.95■□□□□ 0.3
FXR1-213ENST00000479176 RICTORQ6R327 1708 aa16.93■□□□□ 0.3
FXR1-213ENST00000479176 CDC42BPBQ9Y5S2 1711 aa16.92■□□□□ 0.3
FXR1-213ENST00000479176 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
FXR1-213ENST00000479176 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
FXR1-213ENST00000479176 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
FXR1-213ENST00000479176 CDC42BPAQ5VT25 1732 aa16.89■□□□□ 0.29
FXR1-213ENST00000479176 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
FXR1-213ENST00000479176 ARHGAP5Q13017 1502 aa16.88■□□□□ 0.29
FXR1-213ENST00000479176 RAPGEF3O95398 923 aa16.88■□□□□ 0.29
FXR1-213ENST00000479176 ZMYM4Q5VZL5 1548 aa16.87■□□□□ 0.29
FXR1-213ENST00000479176 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
FXR1-213ENST00000479176 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
FXR1-213ENST00000479176 EHBP1L1Q8N3D4 1523 aa16.86■□□□□ 0.29
FXR1-213ENST00000479176 POGZQ7Z3K3 1410 aa16.85■□□□□ 0.29
FXR1-213ENST00000479176 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
FXR1-213ENST00000479176 TIAM1Q13009 1591 aa16.85■□□□□ 0.29
FXR1-213ENST00000479176 MTUS2Q5JR59 1369 aa16.84■□□□□ 0.29
FXR1-213ENST00000479176 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.28
FXR1-213ENST00000479176 ARHGEF40Q8TER5 1519 aa16.83■□□□□ 0.28
FXR1-213ENST00000479176 GPATCH8Q9UKJ3 1502 aaKnown RBP16.83■□□□□ 0.28
FXR1-213ENST00000479176 ABCC1P33527 1531 aa16.81■□□□□ 0.28
FXR1-213ENST00000479176 MAP3K1Q13233 1512 aa16.81■□□□□ 0.28
FXR1-213ENST00000479176 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
FXR1-213ENST00000479176 ITSN2Q9NZM3 1697 aa16.8■□□□□ 0.28
FXR1-213ENST00000479176 KDM5CP41229 1560 aa16.79■□□□□ 0.28
FXR1-213ENST00000479176 SAMD9LQ8IVG5 1584 aa16.78■□□□□ 0.28
FXR1-213ENST00000479176 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
FXR1-213ENST00000479176 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
FXR1-213ENST00000479176 ARHGEF12Q9NZN5 1544 aa16.78■□□□□ 0.28
FXR1-213ENST00000479176 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
FXR1-213ENST00000479176 ZNF518AQ6AHZ1 1483 aa16.78■□□□□ 0.28
FXR1-213ENST00000479176 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.28
FXR1-213ENST00000479176 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
FXR1-213ENST00000479176 YEATS2Q9ULM3 1422 aa16.76■□□□□ 0.27
FXR1-213ENST00000479176 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
FXR1-213ENST00000479176 HECW2Q9P2P5 1572 aa16.73■□□□□ 0.27
FXR1-213ENST00000479176 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
FXR1-213ENST00000479176 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
FXR1-213ENST00000479176 SYCP2Q9BX26 1530 aa16.72■□□□□ 0.27
FXR1-213ENST00000479176 AFAP1Q8N556 730 aa16.72■□□□□ 0.27
FXR1-213ENST00000479176 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
FXR1-213ENST00000479176 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
FXR1-213ENST00000479176 MLH3Q9UHC1 1453 aa16.72■□□□□ 0.27
FXR1-213ENST00000479176 ADAMTSL3P82987 1691 aa16.72■□□□□ 0.27
FXR1-213ENST00000479176 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
FXR1-213ENST00000479176 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
FXR1-213ENST00000479176 DIP2CQ9Y2E4 1556 aa16.69■□□□□ 0.26
FXR1-213ENST00000479176 ATP10AO60312 1499 aa16.69■□□□□ 0.26
FXR1-213ENST00000479176 FKBP8Q14318 412 aa16.69■□□□□ 0.26
FXR1-213ENST00000479176 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
FXR1-213ENST00000479176 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
FXR1-213ENST00000479176 ABCA6Q8N139 1617 aa16.68■□□□□ 0.26
FXR1-213ENST00000479176 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
FXR1-213ENST00000479176 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
FXR1-213ENST00000479176 REREQ9P2R6 1566 aa16.67■□□□□ 0.26
FXR1-213ENST00000479176 MBD5Q9P267 1494 aa16.65■□□□□ 0.26
FXR1-213ENST00000479176 INO80Q9ULG1 1556 aaPredicted RBP16.64■□□□□ 0.25
FXR1-213ENST00000479176 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
FXR1-213ENST00000479176 HNRNPMP52272 730 aaKnown RBP eCLIP16.64■□□□□ 0.256e-6■■■■□ 20.3
FXR1-213ENST00000479176 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
FXR1-213ENST00000479176 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
FXR1-213ENST00000479176 CAMSAP2Q08AD1 1489 aa16.63■□□□□ 0.25
FXR1-213ENST00000479176 ATP7AQ04656 1500 aa16.61■□□□□ 0.25
FXR1-213ENST00000479176 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
FXR1-213ENST00000479176 AGLP35573 1532 aa16.6■□□□□ 0.25
FXR1-213ENST00000479176 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
FXR1-213ENST00000479176 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
FXR1-213ENST00000479176 PTPRMP28827 1452 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms