RNA–Protein interactions for RNA: ENST00000479070.5

CREM-231, Transcript of cAMP responsive element modulator, human

TSL 5 BASIC

Gene CREM, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-231	ENST00000479070	RAPGEF3	O95398	923 aa		13.79	□□□□□ -0.2
CREM-231	ENST00000479070	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.79	□□□□□ -0.2
CREM-231	ENST00000479070	FANCA	O15360	1455 aa		13.79	□□□□□ -0.2
CREM-231	ENST00000479070	PHLDB1	Q86UU1	1377 aa		13.78	□□□□□ -0.2
CREM-231	ENST00000479070	ARHGEF40	Q8TER5	1519 aa		13.78	□□□□□ -0.2
CREM-231	ENST00000479070	AKNA	Q7Z591	1439 aa		13.76	□□□□□ -0.21
CREM-231	ENST00000479070	BCORL1	Q5H9F3	1711 aa		13.76	□□□□□ -0.21
CREM-231	ENST00000479070	SIGLEC1	Q9BZZ2	1709 aa		13.76	□□□□□ -0.21
CREM-231	ENST00000479070	ADAMTSL3	P82987	1691 aa		13.75	□□□□□ -0.21
CREM-231	ENST00000479070	HECW2	Q9P2P5	1572 aa		13.75	□□□□□ -0.21
CREM-231	ENST00000479070	DENND4B	O75064	1496 aa	Predicted RBP	13.74	□□□□□ -0.21
CREM-231	ENST00000479070	ZMYM4	Q5VZL5	1548 aa		13.74	□□□□□ -0.21
CREM-231	ENST00000479070	MADD	Q8WXG6	1647 aa		13.73	□□□□□ -0.21
CREM-231	ENST00000479070	CDC42BPB	Q9Y5S2	1711 aa		13.73	□□□□□ -0.21
CREM-231	ENST00000479070	TRO	Q12816	1431 aa	Predicted RBP	13.72	□□□□□ -0.21
CREM-231	ENST00000479070	PLCH2	O75038	1416 aa		13.71	□□□□□ -0.22
CREM-231	ENST00000479070	CASKIN1	Q8WXD9	1431 aa		13.71	□□□□□ -0.22
CREM-231	ENST00000479070	ZFYVE16	Q7Z3T8	1539 aa		13.7	□□□□□ -0.22
CREM-231	ENST00000479070	RIMS1	Q86UR5	1692 aa	Known RBP	13.7	□□□□□ -0.22
CREM-231	ENST00000479070	PREX2	Q70Z35	1606 aa		13.7	□□□□□ -0.22
CREM-231	ENST00000479070	ARHGAP5	Q13017	1502 aa		13.69	□□□□□ -0.22
CREM-231	ENST00000479070	CCDC18	Q5T9S5	1454 aa		13.69	□□□□□ -0.22
CREM-231	ENST00000479070	CLIP1	P30622	1438 aa		13.69	□□□□□ -0.22
CREM-231	ENST00000479070	POGZ	Q7Z3K3	1410 aa		13.69	□□□□□ -0.22
CREM-231	ENST00000479070	CDC42BPA	Q5VT25	1732 aa		13.69	□□□□□ -0.22
CREM-231	ENST00000479070	FYCO1	Q9BQS8	1478 aa		13.68	□□□□□ -0.22
CREM-231	ENST00000479070	YEATS2	Q9ULM3	1422 aa		13.68	□□□□□ -0.22
CREM-231	ENST00000479070	SCAPER	Q9BY12	1400 aa		13.67	□□□□□ -0.22
CREM-231	ENST00000479070	RNF216	Q9NWF9	866 aa	Predicted RBP	13.66	□□□□□ -0.22
CREM-231	ENST00000479070	PTPRM	P28827	1452 aa		13.66	□□□□□ -0.22
CREM-231	ENST00000479070	ITSN2	Q9NZM3	1697 aa		13.66	□□□□□ -0.22
CREM-231	ENST00000479070	FER1L4	A9Z1Z3	1794 aa		13.66	□□□□□ -0.22
CREM-231	ENST00000479070	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.65	□□□□□ -0.22
CREM-231	ENST00000479070	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.65	□□□□□ -0.22
CREM-231	ENST00000479070	KDM5C	P41229	1560 aa		13.63	□□□□□ -0.23
CREM-231	ENST00000479070	ABCC1	P33527	1531 aa		13.63	□□□□□ -0.23
CREM-231	ENST00000479070	MAGI2	Q86UL8	1455 aa		13.62	□□□□□ -0.23
CREM-231	ENST00000479070	ABCA6	Q8N139	1617 aa		13.61	□□□□□ -0.23
CREM-231	ENST00000479070	EFCAB2	Q5VUJ9	269 aa		13.61	□□□□□ -0.23
CREM-231	ENST00000479070	ZNF518A	Q6AHZ1	1483 aa		13.61	□□□□□ -0.23
CREM-231	ENST00000479070	DIP2C	Q9Y2E4	1556 aa		13.6	□□□□□ -0.23
CREM-231	ENST00000479070	ARHGEF12	Q9NZN5	1544 aa		13.59	□□□□□ -0.23
CREM-231	ENST00000479070	SAMD9L	Q8IVG5	1584 aa		13.59	□□□□□ -0.23
CREM-231	ENST00000479070	CEP162	Q5TB80	1403 aa		13.58	□□□□□ -0.24
CREM-231	ENST00000479070	PPP4R3CP	Q6ZMV5	832 aa		13.58	□□□□□ -0.24
CREM-231	ENST00000479070	C9orf84	Q5VXU9	1444 aa		13.57	□□□□□ -0.24
CREM-231	ENST00000479070	ATP10A	O60312	1499 aa		13.56	□□□□□ -0.24
CREM-231	ENST00000479070	KIDINS220	Q9ULH0	1771 aa		13.56	□□□□□ -0.24
CREM-231	ENST00000479070	MLEC	Q14165	292 aa		13.56	□□□□□ -0.24
CREM-231	ENST00000479070	TRAPPC8	Q9Y2L5	1435 aa		13.56	□□□□□ -0.24
CREM-231	ENST00000479070	SYCP2	Q9BX26	1530 aa		13.55	□□□□□ -0.24
CREM-231	ENST00000479070	AFAP1	Q8N556	730 aa		13.55	□□□□□ -0.24
CREM-231	ENST00000479070	LMTK3	Q96Q04	1460 aa		13.54	□□□□□ -0.24
CREM-231	ENST00000479070	TIAM1	Q13009	1591 aa		13.54	□□□□□ -0.24
CREM-231	ENST00000479070	EHBP1L1	Q8N3D4	1523 aa		13.53	□□□□□ -0.24
CREM-231	ENST00000479070	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.53	□□□□□ -0.24
CREM-231	ENST00000479070	RERE	Q9P2R6	1566 aa		13.53	□□□□□ -0.24
CREM-231	ENST00000479070	CNKSR2	Q8WXI2	1034 aa		13.52	□□□□□ -0.25
CREM-231	ENST00000479070	MLH3	Q9UHC1	1453 aa		13.51	□□□□□ -0.25
CREM-231	ENST00000479070	MYT1L	Q9UL68	1186 aa		13.51	□□□□□ -0.25
CREM-231	ENST00000479070	MTUS2	Q5JR59	1369 aa		13.5	□□□□□ -0.25
CREM-231	ENST00000479070	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.5	□□□□□ -0.25
CREM-231	ENST00000479070	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.5	□□□□□ -0.25
CREM-231	ENST00000479070	PREX1	Q8TCU6	1659 aa		13.5	□□□□□ -0.25
CREM-231	ENST00000479070	INO80	Q9ULG1	1556 aa	Predicted RBP	13.49	□□□□□ -0.25
CREM-231	ENST00000479070	C3	P01024	1663 aa		13.49	□□□□□ -0.25
CREM-231	ENST00000479070	CCNB3	Q8WWL7	1395 aa		13.47	□□□□□ -0.25
CREM-231	ENST00000479070	ATP7A	Q04656	1500 aa		13.47	□□□□□ -0.25
CREM-231	ENST00000479070	AGL	P35573	1532 aa		13.45	□□□□□ -0.26
CREM-231	ENST00000479070	LOC105371045	A0A1W2PR82	267 aa		13.45	□□□□□ -0.26
CREM-231	ENST00000479070	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.44	□□□□□ -0.26	2e-6	■■■■□ 19.8
CREM-231	ENST00000479070	ADGB	Q8N7X0	1667 aa		13.44	□□□□□ -0.26
CREM-231	ENST00000479070	PLEKHH2	Q8IVE3	1493 aa		13.43	□□□□□ -0.26
CREM-231	ENST00000479070	PLXNC1	O60486	1568 aa		13.43	□□□□□ -0.26
CREM-231	ENST00000479070	HSPA2	P54652	639 aa		13.43	□□□□□ -0.26
CREM-231	ENST00000479070	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.43	□□□□□ -0.26
CREM-231	ENST00000479070	NCOA2	Q15596	1464 aa		13.42	□□□□□ -0.26
CREM-231	ENST00000479070	CEBPA	P49715	358 aa	Predicted RBP	13.42	□□□□□ -0.26
CREM-231	ENST00000479070	ILDR1	Q86SU0	546 aa	Predicted RBP	13.42	□□□□□ -0.26
CREM-231	ENST00000479070	CLTC	Q00610	1675 aa	Known RBP	13.41	□□□□□ -0.26
CREM-231	ENST00000479070	VPS8	Q8N3P4	1428 aa		13.41	□□□□□ -0.26
CREM-231	ENST00000479070	KIAA1107	Q9UPP5	1409 aa		13.41	□□□□□ -0.26
CREM-231	ENST00000479070	MROH2A	A6NES4	1674 aa		13.4	□□□□□ -0.26
CREM-231	ENST00000479070	SPAG9	O60271	1321 aa	Known RBP	13.4	□□□□□ -0.26
CREM-231	ENST00000479070	ZNF644	Q9H582	1327 aa	Predicted RBP	13.4	□□□□□ -0.26
CREM-231	ENST00000479070	CAMSAP2	Q08AD1	1489 aa		13.4	□□□□□ -0.26
CREM-231	ENST00000479070	MBD5	Q9P267	1494 aa		13.38	□□□□□ -0.27
CREM-231	ENST00000479070	STRC	Q7RTU9	1775 aa		13.37	□□□□□ -0.27
CREM-231	ENST00000479070	A2M	P01023	1474 aa		13.37	□□□□□ -0.27
CREM-231	ENST00000479070	LRRC9	Q6ZRR7	1453 aa		13.37	□□□□□ -0.27
CREM-231	ENST00000479070	SETD1B	Q9UPS6	1966 aa	Known RBP	13.36	□□□□□ -0.27
CREM-231	ENST00000479070	UHRF1BP1	Q6BDS2	1440 aa		13.35	□□□□□ -0.27
CREM-231	ENST00000479070	CCDC141	Q6ZP82	1450 aa		13.35	□□□□□ -0.27
CREM-231	ENST00000479070	ARHGEF5	Q12774	1597 aa		13.33	□□□□□ -0.28
CREM-231	ENST00000479070	CNTLN	Q9NXG0	1405 aa		13.33	□□□□□ -0.28
CREM-231	ENST00000479070	MYO3A	Q8NEV4	1616 aa		13.33	□□□□□ -0.28
CREM-231	ENST00000479070	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
CREM-231	ENST00000479070	DSG3	P32926	999 aa		13.32	□□□□□ -0.28
CREM-231	ENST00000479070	ESF1	Q9H501	851 aa	Known RBP	13.32	□□□□□ -0.28
CREM-231	ENST00000479070	MAP3K1	Q13233	1512 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms