RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 PREX2Q70Z35 1606 aa27.12■■□□□ 1.93
CDK11A-215ENST00000478901 EFCAB2Q5VUJ9 269 aa27.11■■□□□ 1.93
CDK11A-215ENST00000478901 ARHGAP5Q13017 1502 aa27.11■■□□□ 1.93
CDK11A-215ENST00000478901 GPATCH8Q9UKJ3 1502 aaKnown RBP27.11■■□□□ 1.93
CDK11A-215ENST00000478901 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
CDK11A-215ENST00000478901 SUPT6HQ7KZ85 1726 aaKnown RBP27.09■■□□□ 1.93
CDK11A-215ENST00000478901 CCNB3Q8WWL7 1395 aa27.08■■□□□ 1.93
CDK11A-215ENST00000478901 NCOA2Q15596 1464 aa27.07■■□□□ 1.92
CDK11A-215ENST00000478901 ADGRL1O94910 1474 aa27.03■■□□□ 1.92
CDK11A-215ENST00000478901 RAPGEF3O95398 923 aa27.03■■□□□ 1.92
CDK11A-215ENST00000478901 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
CDK11A-215ENST00000478901 SCAPERQ9BY12 1400 aa27.01■■□□□ 1.91
CDK11A-215ENST00000478901 FRMPD1Q5SYB0 1578 aa27.01■■□□□ 1.91
CDK11A-215ENST00000478901 CFDP1Q9UEE9 299 aaPredicted RBP27■■□□□ 1.91
CDK11A-215ENST00000478901 RICTORQ6R327 1708 aa26.98■■□□□ 1.91
CDK11A-215ENST00000478901 ITSN2Q9NZM3 1697 aa26.98■■□□□ 1.91
CDK11A-215ENST00000478901 ZNF777Q9ULD5 760 aaPredicted RBP26.97■■□□□ 1.91
CDK11A-215ENST00000478901 SAMD9LQ8IVG5 1584 aa26.96■■□□□ 1.91
CDK11A-215ENST00000478901 ABCC1P33527 1531 aa26.95■■□□□ 1.9
CDK11A-215ENST00000478901 POGZQ7Z3K3 1410 aa26.93■■□□□ 1.9
CDK11A-215ENST00000478901 ARHGEF12Q9NZN5 1544 aa26.93■■□□□ 1.9
CDK11A-215ENST00000478901 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
CDK11A-215ENST00000478901 AFAP1Q8N556 730 aa26.88■■□□□ 1.89
CDK11A-215ENST00000478901 TRAPPC8Q9Y2L5 1435 aa26.88■■□□□ 1.89
CDK11A-215ENST00000478901 ZMYM4Q5VZL5 1548 aa26.87■■□□□ 1.89
CDK11A-215ENST00000478901 MYOM3Q5VTT5 1437 aa26.87■■□□□ 1.89
CDK11A-215ENST00000478901 ZNF518AQ6AHZ1 1483 aa26.87■■□□□ 1.89
CDK11A-215ENST00000478901 SYCP2Q9BX26 1530 aa26.86■■□□□ 1.89
CDK11A-215ENST00000478901 HNRNPMP52272 730 aaKnown RBP eCLIP26.86■■□□□ 1.89
CDK11A-215ENST00000478901 KIAA1107Q9UPP5 1409 aa26.86■■□□□ 1.89
CDK11A-215ENST00000478901 PLEKHH2Q8IVE3 1493 aa26.86■■□□□ 1.89
CDK11A-215ENST00000478901 KDM5CP41229 1560 aa26.83■■□□□ 1.89
CDK11A-215ENST00000478901 MIA2Q96PC5 1412 aa26.82■■□□□ 1.88
CDK11A-215ENST00000478901 CAMSAP2Q08AD1 1489 aa26.81■■□□□ 1.88
CDK11A-215ENST00000478901 PPARGC1BQ86YN6 1023 aaKnown RBP26.81■■□□□ 1.88
CDK11A-215ENST00000478901 MAGI2Q86UL8 1455 aa26.8■■□□□ 1.88
CDK11A-215ENST00000478901 YEATS2Q9ULM3 1422 aa26.79■■□□□ 1.88
CDK11A-215ENST00000478901 MBD5Q9P267 1494 aa26.79■■□□□ 1.88
CDK11A-215ENST00000478901 ZFYVE16Q7Z3T8 1539 aa26.77■■□□□ 1.88
CDK11A-215ENST00000478901 ARHGEF40Q8TER5 1519 aa26.77■■□□□ 1.88
CDK11A-215ENST00000478901 MLH3Q9UHC1 1453 aa26.75■■□□□ 1.87
CDK11A-215ENST00000478901 HECW2Q9P2P5 1572 aa26.75■■□□□ 1.87
CDK11A-215ENST00000478901 FGD6Q6ZV73 1430 aa26.73■■□□□ 1.87
CDK11A-215ENST00000478901 MYT1LQ9UL68 1186 aa26.71■■□□□ 1.87
CDK11A-215ENST00000478901 PTPN23Q9H3S7 1636 aa26.71■■□□□ 1.87
CDK11A-215ENST00000478901 KIDINS220Q9ULH0 1771 aa26.71■■□□□ 1.87
CDK11A-215ENST00000478901 SPAG9O60271 1321 aaKnown RBP26.69■■□□□ 1.86
CDK11A-215ENST00000478901 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
CDK11A-215ENST00000478901 CCDC141Q6ZP82 1450 aa26.68■■□□□ 1.86
CDK11A-215ENST00000478901 RSPH4AQ5TD94 716 aa26.68■■□□□ 1.86
CDK11A-215ENST00000478901 ATP10AO60312 1499 aa26.68■■□□□ 1.86
CDK11A-215ENST00000478901 TCOF1Q13428 1488 aaKnown RBP26.68■■□□□ 1.86
CDK11A-215ENST00000478901 ABCA6Q8N139 1617 aa26.67■■□□□ 1.86
CDK11A-215ENST00000478901 DIP2CQ9Y2E4 1556 aa26.67■■□□□ 1.86
CDK11A-215ENST00000478901 INO80Q9ULG1 1556 aaPredicted RBP26.66■■□□□ 1.86
CDK11A-215ENST00000478901 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
CDK11A-215ENST00000478901 SIGLEC1Q9BZZ2 1709 aa26.64■■□□□ 1.85
CDK11A-215ENST00000478901 C9orf84Q5VXU9 1444 aa26.62■■□□□ 1.85
CDK11A-215ENST00000478901 RTEL1-TNFRSF6BF6WH68 1400 aa26.6■■□□□ 1.85
CDK11A-215ENST00000478901 KDM4FA0A1W2PPD8 638 aa26.6■■□□□ 1.85
CDK11A-215ENST00000478901 ARID4BQ4LE39 1312 aaPredicted RBP26.59■■□□□ 1.85
CDK11A-215ENST00000478901 TSPY4P0CV99 314 aa26.58■■□□□ 1.85
CDK11A-215ENST00000478901 TSPY10P0CW01 314 aa26.58■■□□□ 1.85
CDK11A-215ENST00000478901 REREQ9P2R6 1566 aa26.57■■□□□ 1.84
CDK11A-215ENST00000478901 ABCC5O15440 1437 aa26.56■■□□□ 1.84
CDK11A-215ENST00000478901 FAM50AQ14320 339 aaKnown RBP26.56■■□□□ 1.84
CDK11A-215ENST00000478901 DNMT1P26358 1616 aaKnown RBP26.55■■□□□ 1.84
CDK11A-215ENST00000478901 MAST1Q9Y2H9 1570 aa26.54■■□□□ 1.84
CDK11A-215ENST00000478901 DAPK1P53355 1430 aa26.53■■□□□ 1.84
CDK11A-215ENST00000478901 CROCC2H7BZ55 1655 aa26.53■■□□□ 1.84
CDK11A-215ENST00000478901 BCORL1Q5H9F3 1711 aa26.53■■□□□ 1.84
CDK11A-215ENST00000478901 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
CDK11A-215ENST00000478901 A2MP01023 1474 aa26.5■■□□□ 1.83
CDK11A-215ENST00000478901 AGLP35573 1532 aa26.49■■□□□ 1.83
CDK11A-215ENST00000478901 SHANK2Q9UPX8 1470 aa26.49■■□□□ 1.83
CDK11A-215ENST00000478901 ADAMTSL3P82987 1691 aa26.48■■□□□ 1.83
CDK11A-215ENST00000478901 PLXNC1O60486 1568 aa26.48■■□□□ 1.83
CDK11A-215ENST00000478901 MLECQ14165 292 aa26.47■■□□□ 1.83
CDK11A-215ENST00000478901 RRBP1Q9P2E9 1410 aaKnown RBP26.47■■□□□ 1.83
CDK11A-215ENST00000478901 DHX29Q7Z478 1369 aaKnown RBP26.45■■□□□ 1.82
CDK11A-215ENST00000478901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.45■■□□□ 1.82
CDK11A-215ENST00000478901 CHIC2Q9UKJ5 165 aa26.43■■□□□ 1.82
CDK11A-215ENST00000478901 MADDQ8WXG6 1647 aa26.41■■□□□ 1.82
CDK11A-215ENST00000478901 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
CDK11A-215ENST00000478901 RRP7BPQ9NSQ0 103 aa26.37■■□□□ 1.81
CDK11A-215ENST00000478901 KIF15Q9NS87 1388 aa26.36■■□□□ 1.81
CDK11A-215ENST00000478901 NCOA1Q15788 1441 aa26.36■■□□□ 1.81
CDK11A-215ENST00000478901 ADGRL2O95490 1459 aa26.36■■□□□ 1.81
CDK11A-215ENST00000478901 ANKRD30AQ9BXX3 1397 aa26.35■■□□□ 1.81
CDK11A-215ENST00000478901 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
CDK11A-215ENST00000478901 FER1L4A9Z1Z3 1794 aa26.34■■□□□ 1.81
CDK11A-215ENST00000478901 RIMS1Q86UR5 1692 aaKnown RBP26.34■■□□□ 1.81
CDK11A-215ENST00000478901 ITGAEP38570 1179 aa26.33■■□□□ 1.81
CDK11A-215ENST00000478901 KIF3BO15066 747 aa26.32■■□□□ 1.8
CDK11A-215ENST00000478901 PTPRMP28827 1452 aa26.31■■□□□ 1.8
CDK11A-215ENST00000478901 GGT6Q6P531 493 aa26.31■■□□□ 1.8
CDK11A-215ENST00000478901 EIF2AK4Q9P2K8 1649 aaKnown RBP26.27■■□□□ 1.8
CDK11A-215ENST00000478901 ERBINQ96RT1 1412 aa26.26■■□□□ 1.79
CDK11A-215ENST00000478901 ROCK1Q13464 1354 aa26.26■■□□□ 1.79
CDK11A-215ENST00000478901 ESF1Q9H501 851 aaKnown RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms