RNA–Protein interactions for RNA: ENST00000478798.1

BCCIP-205, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 2

Gene BCCIP, Length 1,461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-205ENST00000478798 SLC39A7Q92504 469 aa9.12□□□□□ -0.95
BCCIP-205ENST00000478798 MICALL2Q8IY33 904 aa9.11□□□□□ -0.95
BCCIP-205ENST00000478798 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
BCCIP-205ENST00000478798 SEC24BO95487 1268 aa9.1□□□□□ -0.95
BCCIP-205ENST00000478798 C7P10643 843 aa9.1□□□□□ -0.95
BCCIP-205ENST00000478798 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
BCCIP-205ENST00000478798 CRISPLD2Q9H0B8 497 aa9.09□□□□□ -0.95
BCCIP-205ENST00000478798 COLQQ9Y215 455 aaPredicted RBP9.09□□□□□ -0.95
BCCIP-205ENST00000478798 PDE4AP27815 886 aa9.08□□□□□ -0.96
BCCIP-205ENST00000478798 P3H3Q8IVL6 736 aa9.08□□□□□ -0.96
BCCIP-205ENST00000478798 SCUBE2Q9NQ36 999 aa9.08□□□□□ -0.96
BCCIP-205ENST00000478798 BOLA1Q9Y3E2 137 aa9.08□□□□□ -0.96
BCCIP-205ENST00000478798 POTEFA5A3E0 1075 aa9.07□□□□□ -0.96
BCCIP-205ENST00000478798 G3V3G9 751 aa9.07□□□□□ -0.96
BCCIP-205ENST00000478798 LARP6Q9BRS8 491 aaKnown RBP9.06□□□□□ -0.96
BCCIP-205ENST00000478798 TMEM121BQ9BXQ6 578 aaPredicted RBP9.06□□□□□ -0.96
BCCIP-205ENST00000478798 NBR1Q14596 966 aa9.05□□□□□ -0.96
BCCIP-205ENST00000478798 MFSD10Q14728 455 aa9.05□□□□□ -0.96
BCCIP-205ENST00000478798 KCNV2Q8TDN2 545 aa9.05□□□□□ -0.96
BCCIP-205ENST00000478798 DDX27Q96GQ7 796 aaKnown RBP9.04□□□□□ -0.96
BCCIP-205ENST00000478798 L3MBTL3Q96JM7 780 aaPredicted RBP9.04□□□□□ -0.96
BCCIP-205ENST00000478798 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.96
BCCIP-205ENST00000478798 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.96
BCCIP-205ENST00000478798 E2F4Q16254 413 aa9.02□□□□□ -0.97
BCCIP-205ENST00000478798 TMC2Q8TDI7 906 aa9□□□□□ -0.97
BCCIP-205ENST00000478798 PPP1R15BQ5SWA1 713 aa8.99□□□□□ -0.97
BCCIP-205ENST00000478798 C2orf72A6NCS6 295 aa8.96□□□□□ -0.97
BCCIP-205ENST00000478798 KIF3CO14782 793 aa8.96□□□□□ -0.97
BCCIP-205ENST00000478798 DSG2Q14126 1118 aa8.96□□□□□ -0.97
BCCIP-205ENST00000478798 FOXK1P85037 733 aa8.96□□□□□ -0.98
BCCIP-205ENST00000478798 CAMK2BQ13554 666 aa8.96□□□□□ -0.98
BCCIP-205ENST00000478798 ARHGEF1Q92888 912 aaKnown RBP8.96□□□□□ -0.98
BCCIP-205ENST00000478798 TMEM92Q6UXU6 159 aa8.95□□□□□ -0.98
BCCIP-205ENST00000478798 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
BCCIP-205ENST00000478798 PLPP6Q8IY26 295 aa8.91□□□□□ -0.98
BCCIP-205ENST00000478798 ST18O60284 1047 aa8.9□□□□□ -0.98
BCCIP-205ENST00000478798 ARIH1Q9Y4X5 557 aaPredicted RBP8.9□□□□□ -0.98
BCCIP-205ENST00000478798 EMILIN3Q9NT22 766 aa8.89□□□□□ -0.99
BCCIP-205ENST00000478798 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.89□□□□□ -0.99
BCCIP-205ENST00000478798 DPYSL4O14531 572 aa8.85□□□□□ -0.99
BCCIP-205ENST00000478798 SEMA3EO15041 775 aa8.84□□□□□ -0.99
BCCIP-205ENST00000478798 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
BCCIP-205ENST00000478798 TESPA1A2RU30 521 aaPredicted RBP8.82□□□□□ -1
BCCIP-205ENST00000478798 UPF1Q92900 1129 aaKnown RBP eCLIP8.82□□□□□ -1
BCCIP-205ENST00000478798 PRKCSHP14314 528 aaPredicted RBP8.81□□□□□ -1
BCCIP-205ENST00000478798 PDIA6Q15084 440 aa8.81□□□□□ -1
BCCIP-205ENST00000478798 SPDYE16A6NNV3 312 aaPredicted RBP8.79□□□□□ -1
BCCIP-205ENST00000478798 TULP1O00294 542 aaPredicted RBP8.79□□□□□ -1
BCCIP-205ENST00000478798 MAP3K9P80192 1104 aa8.79□□□□□ -1
BCCIP-205ENST00000478798 OXER1Q8TDS5 423 aa8.79□□□□□ -1
BCCIP-205ENST00000478798 LMOD2Q6P5Q4 547 aa8.78□□□□□ -1
BCCIP-205ENST00000478798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1
BCCIP-205ENST00000478798 SLC34A2O95436 690 aa8.77□□□□□ -1.01
BCCIP-205ENST00000478798 MLLT3P42568 568 aaPredicted RBP8.76□□□□□ -1.01
BCCIP-205ENST00000478798 SMYD5Q6GMV2 418 aa8.76□□□□□ -1.01
BCCIP-205ENST00000478798 SLAIN1Q8ND83 568 aa8.76□□□□□ -1.01
BCCIP-205ENST00000478798 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
BCCIP-205ENST00000478798 TBC1D12O60347 775 aa8.73□□□□□ -1.01
BCCIP-205ENST00000478798 EVI5O60447 810 aa8.71□□□□□ -1.01
BCCIP-205ENST00000478798 ZNF316A6NFI3 1004 aaPredicted RBP8.7□□□□□ -1.02
BCCIP-205ENST00000478798 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
BCCIP-205ENST00000478798 DOK7Q18PE1 504 aa8.69□□□□□ -1.02
BCCIP-205ENST00000478798 GRXCR2A6NFK2 248 aa8.68□□□□□ -1.02
BCCIP-205ENST00000478798 HOXB3P14651 431 aaPredicted RBP8.68□□□□□ -1.02
BCCIP-205ENST00000478798 PTGER2P43116 358 aa8.68□□□□□ -1.02
BCCIP-205ENST00000478798 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
BCCIP-205ENST00000478798 DDX12PQ92771 950 aa8.67□□□□□ -1.02
BCCIP-205ENST00000478798 MARVELD3Q96A59 401 aa8.66□□□□□ -1.02
BCCIP-205ENST00000478798 RIMBP2O15034 1052 aa8.65□□□□□ -1.02
BCCIP-205ENST00000478798 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
BCCIP-205ENST00000478798 ANO8Q9HCE9 1232 aaPredicted RBP8.65□□□□□ -1.02
BCCIP-205ENST00000478798 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
BCCIP-205ENST00000478798 ZNF710Q8N1W2 664 aa8.64□□□□□ -1.03
BCCIP-205ENST00000478798 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
BCCIP-205ENST00000478798 OSBPP22059 807 aa8.63□□□□□ -1.03
BCCIP-205ENST00000478798 KHSRPQ92945 711 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■□□□ 11.6
BCCIP-205ENST00000478798 KDM4FA0A1W2PPD8 638 aa8.62□□□□□ -1.03
BCCIP-205ENST00000478798 NUDT7P0C024 238 aa8.62□□□□□ -1.03
BCCIP-205ENST00000478798 ARSIQ5FYB1 569 aa8.62□□□□□ -1.03
BCCIP-205ENST00000478798 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
BCCIP-205ENST00000478798 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
BCCIP-205ENST00000478798 SNPHO15079 494 aa8.61□□□□□ -1.03
BCCIP-205ENST00000478798 GPR153Q6NV75 609 aa8.61□□□□□ -1.03
BCCIP-205ENST00000478798 PHF14O94880 888 aa8.6□□□□□ -1.03
BCCIP-205ENST00000478798 JPH4Q96JJ6 628 aa8.59□□□□□ -1.03
BCCIP-205ENST00000478798 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
BCCIP-205ENST00000478798 EPAS1Q99814 870 aa8.58□□□□□ -1.04
BCCIP-205ENST00000478798 ZMYND10O75800 440 aa8.57□□□□□ -1.04
BCCIP-205ENST00000478798 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
BCCIP-205ENST00000478798 NUTM2FA1L443 756 aa8.57□□□□□ -1.04
BCCIP-205ENST00000478798 GPR37O15354 613 aa8.57□□□□□ -1.04
BCCIP-205ENST00000478798 EN1Q05925 392 aaPredicted RBP8.57□□□□□ -1.04
BCCIP-205ENST00000478798 FOSBP53539 338 aa8.56□□□□□ -1.04
BCCIP-205ENST00000478798 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
BCCIP-205ENST00000478798 TYW1BQ6NUM6 668 aa8.55□□□□□ -1.04
BCCIP-205ENST00000478798 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
BCCIP-205ENST00000478798 ZNF454Q8N9F8 522 aa8.55□□□□□ -1.04
BCCIP-205ENST00000478798 MAP3K7O43318 606 aa8.54□□□□□ -1.04
BCCIP-205ENST00000478798 HOXB1P14653 301 aaPredicted RBP8.54□□□□□ -1.04
BCCIP-205ENST00000478798 BARGINQ6ZT62 677 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms