RNA–Protein interactions for RNA: ENST00000478742.1

CHI3L1-205, Transcript of chitinase 3 like 1, humanhuman

TSL 2

Gene CHI3L1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1-205ENST00000478742 ARAP3Q8WWN8 1544 aa22.77■■□□□ 1.24
CHI3L1-205ENST00000478742 ZNF777Q9ULD5 760 aaPredicted RBP22.76■■□□□ 1.23
CHI3L1-205ENST00000478742 CDC42BPAQ5VT25 1732 aa22.76■■□□□ 1.23
CHI3L1-205ENST00000478742 FANCAO15360 1455 aa22.75■■□□□ 1.23
CHI3L1-205ENST00000478742 MIA2Q96PC5 1412 aa22.74■■□□□ 1.23
CHI3L1-205ENST00000478742 TSPOAP1O95153 1857 aa22.73■■□□□ 1.23
CHI3L1-205ENST00000478742 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
CHI3L1-205ENST00000478742 FGD6Q6ZV73 1430 aa22.72■■□□□ 1.23
CHI3L1-205ENST00000478742 NEO1Q92859 1461 aa22.72■■□□□ 1.23
CHI3L1-205ENST00000478742 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
CHI3L1-205ENST00000478742 PPRC1Q5VV67 1664 aaKnown RBP22.7■■□□□ 1.22
CHI3L1-205ENST00000478742 AKNAQ7Z591 1439 aa22.69■■□□□ 1.22
CHI3L1-205ENST00000478742 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
CHI3L1-205ENST00000478742 ZNF644Q9H582 1327 aaPredicted RBP22.65■■□□□ 1.22
CHI3L1-205ENST00000478742 ADGRL1O94910 1474 aa22.65■■□□□ 1.22
CHI3L1-205ENST00000478742 CAMSAP2Q08AD1 1489 aa22.65■■□□□ 1.22
CHI3L1-205ENST00000478742 SAMD9LQ8IVG5 1584 aa22.64■■□□□ 1.22
CHI3L1-205ENST00000478742 FAM50AQ14320 339 aaKnown RBP22.64■■□□□ 1.21
CHI3L1-205ENST00000478742 PTPN23Q9H3S7 1636 aa22.64■■□□□ 1.21
CHI3L1-205ENST00000478742 SCAPERQ9BY12 1400 aa22.62■■□□□ 1.21
CHI3L1-205ENST00000478742 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
CHI3L1-205ENST00000478742 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
CHI3L1-205ENST00000478742 ABCC1P33527 1531 aa22.61■■□□□ 1.21
CHI3L1-205ENST00000478742 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
CHI3L1-205ENST00000478742 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.21
CHI3L1-205ENST00000478742 SYCP2Q9BX26 1530 aa22.58■■□□□ 1.21
CHI3L1-205ENST00000478742 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
CHI3L1-205ENST00000478742 RSPH4AQ5TD94 716 aa22.56■■□□□ 1.2
CHI3L1-205ENST00000478742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.55■■□□□ 1.2
CHI3L1-205ENST00000478742 ARHGEF12Q9NZN5 1544 aa22.55■■□□□ 1.2
CHI3L1-205ENST00000478742 POGZQ7Z3K3 1410 aa22.53■■□□□ 1.2
CHI3L1-205ENST00000478742 MBD5Q9P267 1494 aa22.53■■□□□ 1.2
CHI3L1-205ENST00000478742 TRAPPC8Q9Y2L5 1435 aa22.52■■□□□ 1.2
CHI3L1-205ENST00000478742 RAPGEF3O95398 923 aa22.52■■□□□ 1.2
CHI3L1-205ENST00000478742 KDM6BO15054 1643 aa22.52■■□□□ 1.2
CHI3L1-205ENST00000478742 ZNF518AQ6AHZ1 1483 aa22.52■■□□□ 1.2
CHI3L1-205ENST00000478742 CCDC141Q6ZP82 1450 aa22.52■■□□□ 1.2
CHI3L1-205ENST00000478742 AFAP1Q8N556 730 aa22.51■■□□□ 1.19
CHI3L1-205ENST00000478742 ARHGEF5Q12774 1597 aa22.5■■□□□ 1.19
CHI3L1-205ENST00000478742 TSPY4P0CV99 314 aa22.5■■□□□ 1.19
CHI3L1-205ENST00000478742 TSPY10P0CW01 314 aa22.5■■□□□ 1.19
CHI3L1-205ENST00000478742 COL17A1Q9UMD9 1497 aaPredicted RBP22.49■■□□□ 1.19
CHI3L1-205ENST00000478742 ITGAEP38570 1179 aa22.49■■□□□ 1.19
CHI3L1-205ENST00000478742 MYT1LQ9UL68 1186 aa22.49■■□□□ 1.19
CHI3L1-205ENST00000478742 DAPK1P53355 1430 aa22.48■■□□□ 1.19
CHI3L1-205ENST00000478742 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
CHI3L1-205ENST00000478742 ABCC5O15440 1437 aa22.47■■□□□ 1.19
CHI3L1-205ENST00000478742 DNMT1P26358 1616 aaKnown RBP22.46■■□□□ 1.19
CHI3L1-205ENST00000478742 FRMPD1Q5SYB0 1578 aa22.44■■□□□ 1.18
CHI3L1-205ENST00000478742 RICTORQ6R327 1708 aa22.44■■□□□ 1.18
CHI3L1-205ENST00000478742 KDM5CP41229 1560 aa22.42■■□□□ 1.18
CHI3L1-205ENST00000478742 TRIM26Q12899 539 aaPredicted RBP22.42■■□□□ 1.18
CHI3L1-205ENST00000478742 SHANK2Q9UPX8 1470 aa22.41■■□□□ 1.18
CHI3L1-205ENST00000478742 C9orf84Q5VXU9 1444 aa22.41■■□□□ 1.18
CHI3L1-205ENST00000478742 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
CHI3L1-205ENST00000478742 ZMYM4Q5VZL5 1548 aa22.4■■□□□ 1.18
CHI3L1-205ENST00000478742 MLH3Q9UHC1 1453 aa22.4■■□□□ 1.18
CHI3L1-205ENST00000478742 MAGI2Q86UL8 1455 aa22.39■■□□□ 1.17
CHI3L1-205ENST00000478742 RTEL1-TNFRSF6BF6WH68 1400 aa22.39■■□□□ 1.17
CHI3L1-205ENST00000478742 HECW2Q9P2P5 1572 aa22.38■■□□□ 1.17
CHI3L1-205ENST00000478742 CROCC2H7BZ55 1655 aa22.38■■□□□ 1.17
CHI3L1-205ENST00000478742 MAST1Q9Y2H9 1570 aa22.38■■□□□ 1.17
CHI3L1-205ENST00000478742 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
CHI3L1-205ENST00000478742 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
CHI3L1-205ENST00000478742 ZFYVE16Q7Z3T8 1539 aa22.36■■□□□ 1.17
CHI3L1-205ENST00000478742 ANKRD30AQ9BXX3 1397 aa22.35■■□□□ 1.17
CHI3L1-205ENST00000478742 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
CHI3L1-205ENST00000478742 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
CHI3L1-205ENST00000478742 ADGRL2O95490 1459 aa22.31■■□□□ 1.16
CHI3L1-205ENST00000478742 ROCK1Q13464 1354 aa22.31■■□□□ 1.16
CHI3L1-205ENST00000478742 KIDINS220Q9ULH0 1771 aa22.3■■□□□ 1.16
CHI3L1-205ENST00000478742 RRP7BPQ9NSQ0 103 aa22.3■■□□□ 1.16
CHI3L1-205ENST00000478742 KIF15Q9NS87 1388 aa22.29■■□□□ 1.16
CHI3L1-205ENST00000478742 ARHGEF40Q8TER5 1519 aa22.29■■□□□ 1.16
CHI3L1-205ENST00000478742 NCOA1Q15788 1441 aa22.29■■□□□ 1.16
CHI3L1-205ENST00000478742 ADGBQ8N7X0 1667 aa22.29■■□□□ 1.16
CHI3L1-205ENST00000478742 PLXNC1O60486 1568 aa22.28■■□□□ 1.16
CHI3L1-205ENST00000478742 ABCA6Q8N139 1617 aa22.27■■□□□ 1.16
CHI3L1-205ENST00000478742 ATP10AO60312 1499 aa22.27■■□□□ 1.16
CHI3L1-205ENST00000478742 DIP2CQ9Y2E4 1556 aa22.26■■□□□ 1.15
CHI3L1-205ENST00000478742 A2MP01023 1474 aa22.24■■□□□ 1.15
CHI3L1-205ENST00000478742 DUOX2Q9NRD8 1548 aa22.23■■□□□ 1.15
CHI3L1-205ENST00000478742 DHX29Q7Z478 1369 aaKnown RBP22.22■■□□□ 1.15
CHI3L1-205ENST00000478742 HFM1A2PYH4 1435 aa22.2■■□□□ 1.14
CHI3L1-205ENST00000478742 PCGF6Q9BYE7 350 aa22.19■■□□□ 1.14
CHI3L1-205ENST00000478742 NAIPQ13075 1403 aa22.18■■□□□ 1.14
CHI3L1-205ENST00000478742 ERBINQ96RT1 1412 aa22.18■■□□□ 1.14
CHI3L1-205ENST00000478742 ANKRD50Q9ULJ7 1429 aa22.18■■□□□ 1.14
CHI3L1-205ENST00000478742 ARID4BQ4LE39 1312 aaPredicted RBP22.18■■□□□ 1.14
CHI3L1-205ENST00000478742 REREQ9P2R6 1566 aa22.17■■□□□ 1.14
CHI3L1-205ENST00000478742 KIF3BO15066 747 aa22.14■■□□□ 1.13
CHI3L1-205ENST00000478742 SETD5Q9C0A6 1442 aa22.14■■□□□ 1.13
CHI3L1-205ENST00000478742 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.13
CHI3L1-205ENST00000478742 AGLP35573 1532 aa22.12■■□□□ 1.13
CHI3L1-205ENST00000478742 EIF2AK4Q9P2K8 1649 aaKnown RBP22.09■■□□□ 1.13
CHI3L1-205ENST00000478742 MLECQ14165 292 aa22.08■■□□□ 1.13
CHI3L1-205ENST00000478742 GGT6Q6P531 493 aa22.08■■□□□ 1.13
CHI3L1-205ENST00000478742 RAB3GAP2Q9H2M9 1393 aa22.06■■□□□ 1.12
CHI3L1-205ENST00000478742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.12
CHI3L1-205ENST00000478742 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms