RNA–Protein interactions for RNA: ENST00000478705.5

SFT2D1-202, Transcript of SFT2 domain containing 1, humanhuman

TSL 2

Gene SFT2D1, Length 659 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-202ENST00000478705 SCAPERQ9BY12 1400 aa27.15■■□□□ 1.94
SFT2D1-202ENST00000478705 ARID4BQ4LE39 1312 aaPredicted RBP27.15■■□□□ 1.94
SFT2D1-202ENST00000478705 MAGI2Q86UL8 1455 aa27.13■■□□□ 1.93
SFT2D1-202ENST00000478705 PCF11O94913 1555 aaKnown RBP27.11■■□□□ 1.93
SFT2D1-202ENST00000478705 CDK11AQ9UQ88 783 aaPredicted RBP27.11■■□□□ 1.93
SFT2D1-202ENST00000478705 ILDR1Q86SU0 546 aaPredicted RBP27.09■■□□□ 1.93
SFT2D1-202ENST00000478705 RIMS1Q86UR5 1692 aaKnown RBP27.08■■□□□ 1.93
SFT2D1-202ENST00000478705 CASKIN1Q8WXD9 1431 aa27.07■■□□□ 1.92
SFT2D1-202ENST00000478705 EFCAB2Q5VUJ9 269 aa27.07■■□□□ 1.92
SFT2D1-202ENST00000478705 CLIP1P30622 1438 aa27.04■■□□□ 1.92
SFT2D1-202ENST00000478705 CDC42BPBQ9Y5S2 1711 aa27.02■■□□□ 1.92
SFT2D1-202ENST00000478705 ARHGAP5Q13017 1502 aa27.02■■□□□ 1.92
SFT2D1-202ENST00000478705 CCDC18Q5T9S5 1454 aa27.01■■□□□ 1.91
SFT2D1-202ENST00000478705 LMTK3Q96Q04 1460 aa27■■□□□ 1.91
SFT2D1-202ENST00000478705 KDM5CP41229 1560 aa27■■□□□ 1.91
SFT2D1-202ENST00000478705 ATP10AO60312 1499 aa26.98■■□□□ 1.91
SFT2D1-202ENST00000478705 ZNF518AQ6AHZ1 1483 aa26.98■■□□□ 1.91
SFT2D1-202ENST00000478705 PREX2Q70Z35 1606 aa26.97■■□□□ 1.91
SFT2D1-202ENST00000478705 FYCO1Q9BQS8 1478 aa26.96■■□□□ 1.91
SFT2D1-202ENST00000478705 C9orf84Q5VXU9 1444 aa26.96■■□□□ 1.91
SFT2D1-202ENST00000478705 AFAP1Q8N556 730 aa26.94■■□□□ 1.9
SFT2D1-202ENST00000478705 FER1L4A9Z1Z3 1794 aa26.94■■□□□ 1.9
SFT2D1-202ENST00000478705 ARHGEF12Q9NZN5 1544 aa26.93■■□□□ 1.9
SFT2D1-202ENST00000478705 MLECQ14165 292 aa26.92■■□□□ 1.9
SFT2D1-202ENST00000478705 ABCC1P33527 1531 aa26.91■■□□□ 1.9
SFT2D1-202ENST00000478705 CDC42BPAQ5VT25 1732 aa26.9■■□□□ 1.9
SFT2D1-202ENST00000478705 DIP2CQ9Y2E4 1556 aa26.9■■□□□ 1.9
SFT2D1-202ENST00000478705 TRAPPC8Q9Y2L5 1435 aa26.88■■□□□ 1.89
SFT2D1-202ENST00000478705 ITSN2Q9NZM3 1697 aa26.87■■□□□ 1.89
SFT2D1-202ENST00000478705 ABCA6Q8N139 1617 aa26.87■■□□□ 1.89
SFT2D1-202ENST00000478705 MLH3Q9UHC1 1453 aa26.86■■□□□ 1.89
SFT2D1-202ENST00000478705 REREQ9P2R6 1566 aa26.85■■□□□ 1.89
SFT2D1-202ENST00000478705 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
SFT2D1-202ENST00000478705 HSPA2P54652 639 aa26.81■■□□□ 1.88
SFT2D1-202ENST00000478705 GPATCH8Q9UKJ3 1502 aaKnown RBP26.79■■□□□ 1.88
SFT2D1-202ENST00000478705 SAMD9LQ8IVG5 1584 aa26.79■■□□□ 1.88
SFT2D1-202ENST00000478705 KIDINS220Q9ULH0 1771 aa26.79■■□□□ 1.88
SFT2D1-202ENST00000478705 AGLP35573 1532 aa26.75■■□□□ 1.87
SFT2D1-202ENST00000478705 CEBPAP49715 358 aaPredicted RBP26.74■■□□□ 1.87
SFT2D1-202ENST00000478705 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
SFT2D1-202ENST00000478705 SYCP2Q9BX26 1530 aa26.72■■□□□ 1.87
SFT2D1-202ENST00000478705 PREX1Q8TCU6 1659 aa26.71■■□□□ 1.87
SFT2D1-202ENST00000478705 ZNF777Q9ULD5 760 aaPredicted RBP26.68■■□□□ 1.86
SFT2D1-202ENST00000478705 FBXO41Q8TF61 875 aa26.66■■□□□ 1.86
SFT2D1-202ENST00000478705 C3P01024 1663 aa26.66■■□□□ 1.86
SFT2D1-202ENST00000478705 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
SFT2D1-202ENST00000478705 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
SFT2D1-202ENST00000478705 MTUS2Q5JR59 1369 aa26.64■■□□□ 1.86
SFT2D1-202ENST00000478705 HNRNPMP52272 730 aaKnown RBP eCLIP26.64■■□□□ 1.862e-7■■■■□ 21.3
SFT2D1-202ENST00000478705 TIAM1Q13009 1591 aa26.63■■□□□ 1.85
SFT2D1-202ENST00000478705 CCNB3Q8WWL7 1395 aa26.62■■□□□ 1.85
SFT2D1-202ENST00000478705 INO80Q9ULG1 1556 aaPredicted RBP26.62■■□□□ 1.85
SFT2D1-202ENST00000478705 EHBP1L1Q8N3D4 1523 aa26.61■■□□□ 1.85
SFT2D1-202ENST00000478705 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
SFT2D1-202ENST00000478705 ATP7AQ04656 1500 aa26.6■■□□□ 1.85
SFT2D1-202ENST00000478705 PLEKHH2Q8IVE3 1493 aa26.6■■□□□ 1.85
SFT2D1-202ENST00000478705 SPAG9O60271 1321 aaKnown RBP26.6■■□□□ 1.85
SFT2D1-202ENST00000478705 SETD1BQ9UPS6 1966 aaKnown RBP26.58■■□□□ 1.85
SFT2D1-202ENST00000478705 UHRF1BP1Q6BDS2 1440 aa26.57■■□□□ 1.84
SFT2D1-202ENST00000478705 PLXNC1O60486 1568 aa26.57■■□□□ 1.84
SFT2D1-202ENST00000478705 STRCQ7RTU9 1775 aa26.56■■□□□ 1.84
SFT2D1-202ENST00000478705 SUPT6HQ7KZ85 1726 aaKnown RBP26.55■■□□□ 1.84
SFT2D1-202ENST00000478705 ZNF644Q9H582 1327 aaPredicted RBP26.54■■□□□ 1.84
SFT2D1-202ENST00000478705 MBD5Q9P267 1494 aa26.54■■□□□ 1.84
SFT2D1-202ENST00000478705 CNTLNQ9NXG0 1405 aa26.53■■□□□ 1.84
SFT2D1-202ENST00000478705 MROH2AA6NES4 1674 aa26.51■■□□□ 1.83
SFT2D1-202ENST00000478705 A2MP01023 1474 aa26.5■■□□□ 1.83
SFT2D1-202ENST00000478705 ESF1Q9H501 851 aaKnown RBP26.49■■□□□ 1.83
SFT2D1-202ENST00000478705 NCOA2Q15596 1464 aa26.46■■□□□ 1.83
SFT2D1-202ENST00000478705 ADGBQ8N7X0 1667 aa26.45■■□□□ 1.82
SFT2D1-202ENST00000478705 CERKQ8TCT0 537 aa26.44■■□□□ 1.82
SFT2D1-202ENST00000478705 ZMYM3Q14202 1370 aa26.44■■□□□ 1.82
SFT2D1-202ENST00000478705 CLTCQ00610 1675 aaKnown RBP26.44■■□□□ 1.82
SFT2D1-202ENST00000478705 NPATQ14207 1427 aa26.43■■□□□ 1.82
SFT2D1-202ENST00000478705 RTEL1-TNFRSF6BF6WH68 1400 aa26.41■■□□□ 1.82
SFT2D1-202ENST00000478705 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
SFT2D1-202ENST00000478705 CAMSAP2Q08AD1 1489 aa26.38■■□□□ 1.81
SFT2D1-202ENST00000478705 VPS8Q8N3P4 1428 aa26.38■■□□□ 1.81
SFT2D1-202ENST00000478705 DMRT2Q9Y5R5 561 aa26.37■■□□□ 1.81
SFT2D1-202ENST00000478705 PTPRTO14522 1441 aa26.37■■□□□ 1.81
SFT2D1-202ENST00000478705 NCOA1Q15788 1441 aa26.36■■□□□ 1.81
SFT2D1-202ENST00000478705 CCDC141Q6ZP82 1450 aa26.36■■□□□ 1.81
SFT2D1-202ENST00000478705 GGT6Q6P531 493 aa26.35■■□□□ 1.81
SFT2D1-202ENST00000478705 PTPRKQ15262 1439 aa26.34■■□□□ 1.81
SFT2D1-202ENST00000478705 DHX29Q7Z478 1369 aaKnown RBP26.33■■□□□ 1.81
SFT2D1-202ENST00000478705 LRRC9Q6ZRR7 1453 aa26.33■■□□□ 1.81
SFT2D1-202ENST00000478705 MYO3AQ8NEV4 1616 aa26.32■■□□□ 1.8
SFT2D1-202ENST00000478705 CAMSAP1Q5T5Y3 1602 aa26.32■■□□□ 1.8
SFT2D1-202ENST00000478705 ZNF142P52746 1687 aaPredicted RBP26.31■■□□□ 1.8
SFT2D1-202ENST00000478705 ARHGEF5Q12774 1597 aa26.3■■□□□ 1.8
SFT2D1-202ENST00000478705 PPP6R1Q9UPN7 881 aa26.3■■□□□ 1.8
SFT2D1-202ENST00000478705 LTBP4Q8N2S1 1624 aa26.27■■□□□ 1.8
SFT2D1-202ENST00000478705 CEP170BQ9Y4F5 1589 aaPredicted RBP26.26■■□□□ 1.79
SFT2D1-202ENST00000478705 MAP3K1Q13233 1512 aa26.25■■□□□ 1.79
SFT2D1-202ENST00000478705 KANK4Q5T7N3 995 aaPredicted RBP26.25■■□□□ 1.79
SFT2D1-202ENST00000478705 RSPH4AQ5TD94 716 aa26.25■■□□□ 1.79
SFT2D1-202ENST00000478705 KIF3BO15066 747 aa26.21■■□□□ 1.79
SFT2D1-202ENST00000478705 PLA2R1Q13018 1463 aa26.21■■□□□ 1.79
SFT2D1-202ENST00000478705 FAM135AQ9P2D6 1515 aa26.19■■□□□ 1.78
SFT2D1-202ENST00000478705 NCKAP5LQ9HCH0 1330 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms