RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 FAM163AQ96GL9 167 aaPredicted RBP6.63□□□□□ -1.35
GARNL3-214ENST00000478696 RIMBP2O15034 1052 aa6.62□□□□□ -1.35
GARNL3-214ENST00000478696 DOK7Q18PE1 504 aa6.61□□□□□ -1.35
GARNL3-214ENST00000478696 ZNF710Q8N1W2 664 aa6.61□□□□□ -1.35
GARNL3-214ENST00000478696 C2orf72A6NCS6 295 aa6.59□□□□□ -1.35
GARNL3-214ENST00000478696 PDE4AP27815 886 aa6.59□□□□□ -1.35
GARNL3-214ENST00000478696 TMEM92Q6UXU6 159 aa6.58□□□□□ -1.36
GARNL3-214ENST00000478696 GPHNQ9NQX3 736 aaPredicted RBP6.58□□□□□ -1.36
GARNL3-214ENST00000478696 KIF3CO14782 793 aa6.56□□□□□ -1.36
GARNL3-214ENST00000478696 ST18O60284 1047 aa6.55□□□□□ -1.36
GARNL3-214ENST00000478696 FOXK1P85037 733 aa6.55□□□□□ -1.36
GARNL3-214ENST00000478696 ZSWIM6Q9HCJ5 1215 aa6.55□□□□□ -1.36
GARNL3-214ENST00000478696 PLPP6Q8IY26 295 aa6.53□□□□□ -1.36
GARNL3-214ENST00000478696 DDX27Q96GQ7 796 aaKnown RBP6.53□□□□□ -1.36
GARNL3-214ENST00000478696 LARP6Q9BRS8 491 aaKnown RBP6.53□□□□□ -1.36
GARNL3-214ENST00000478696 CRISPLD2Q9H0B8 497 aa6.53□□□□□ -1.36
GARNL3-214ENST00000478696 TBC1D12O60347 775 aa6.52□□□□□ -1.37
GARNL3-214ENST00000478696 HOXB3P14651 431 aaPredicted RBP6.52□□□□□ -1.37
GARNL3-214ENST00000478696 WDR70Q9NW82 654 aa6.52□□□□□ -1.37
GARNL3-214ENST00000478696 DSG2Q14126 1118 aa6.51□□□□□ -1.37
GARNL3-214ENST00000478696 PPP1R15BQ5SWA1 713 aa6.51□□□□□ -1.37
GARNL3-214ENST00000478696 POTEMA6NI47 508 aa6.5□□□□□ -1.37
GARNL3-214ENST00000478696 SLC34A2O95436 690 aa6.5□□□□□ -1.37
GARNL3-214ENST00000478696 HOXB1P14653 301 aaPredicted RBP6.5□□□□□ -1.37
GARNL3-214ENST00000478696 EMP3P54852 163 aa6.5□□□□□ -1.37
GARNL3-214ENST00000478696 NCKAP5LQ9HCH0 1330 aa6.5□□□□□ -1.37
GARNL3-214ENST00000478696 PLCB2Q00722 1185 aa6.49□□□□□ -1.37
GARNL3-214ENST00000478696 POTEGQ6S5H5 508 aa6.49□□□□□ -1.37
GARNL3-214ENST00000478696 ARSIQ5FYB1 569 aa6.47□□□□□ -1.37
GARNL3-214ENST00000478696 CADPS2Q86UW7 1296 aa6.47□□□□□ -1.37
GARNL3-214ENST00000478696 MARVELD3Q96A59 401 aa6.47□□□□□ -1.37
GARNL3-214ENST00000478696 ERBB3P21860 1342 aa6.47□□□□□ -1.37
GARNL3-214ENST00000478696 ZNF316A6NFI3 1004 aaPredicted RBP6.46□□□□□ -1.38
GARNL3-214ENST00000478696 MFSD10Q14728 455 aa6.46□□□□□ -1.38
GARNL3-214ENST00000478696 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
GARNL3-214ENST00000478696 GPR153Q6NV75 609 aa6.46□□□□□ -1.38
GARNL3-214ENST00000478696 PTCD2Q8WV60 388 aaKnown RBP6.46□□□□□ -1.38
GARNL3-214ENST00000478696 PCDHGA4Q9Y5G9 962 aa6.46□□□□□ -1.38
GARNL3-214ENST00000478696 PCDH10Q9P2E7 1040 aa6.45□□□□□ -1.38
GARNL3-214ENST00000478696 FAM205CA6NFA0 338 aa6.44□□□□□ -1.38
GARNL3-214ENST00000478696 MAP3K9P80192 1104 aa6.44□□□□□ -1.38
GARNL3-214ENST00000478696 UPF1Q92900 1129 aaKnown RBP eCLIP6.44□□□□□ -1.38
GARNL3-214ENST00000478696 NUDT7P0C024 238 aa6.43□□□□□ -1.38
GARNL3-214ENST00000478696 HAP1P54257 671 aaPredicted RBP6.43□□□□□ -1.38
GARNL3-214ENST00000478696 TSHZ2Q9NRE2 1034 aa6.43□□□□□ -1.38
GARNL3-214ENST00000478696 PSDA5PKW4 1024 aaPredicted RBP6.42□□□□□ -1.38
GARNL3-214ENST00000478696 E2F4Q16254 413 aa6.41□□□□□ -1.38
GARNL3-214ENST00000478696 OXER1Q8TDS5 423 aa6.41□□□□□ -1.38
GARNL3-214ENST00000478696 KHSRPQ92945 711 aaKnown RBP eCLIP6.41□□□□□ -1.38
GARNL3-214ENST00000478696 HS3ST6Q96QI5 342 aa6.41□□□□□ -1.38
GARNL3-214ENST00000478696 VARS2Q5ST30 1063 aaKnown RBP6.4□□□□□ -1.38
GARNL3-214ENST00000478696 CDAN1Q8IWY9 1227 aa6.4□□□□□ -1.38
GARNL3-214ENST00000478696 CAMK2BQ13554 666 aa6.39□□□□□ -1.39
GARNL3-214ENST00000478696 EVI5O60447 810 aa6.38□□□□□ -1.39
GARNL3-214ENST00000478696 LHX6Q9UPM6 363 aa6.38□□□□□ -1.39
GARNL3-214ENST00000478696 EMILIN3Q9NT22 766 aa6.37□□□□□ -1.39
GARNL3-214ENST00000478696 PPP4R3BQ5MIZ7 849 aa6.36□□□□□ -1.39
GARNL3-214ENST00000478696 ZNF687Q8N1G0 1237 aa6.36□□□□□ -1.39
GARNL3-214ENST00000478696 KCNH8Q96L42 1107 aa6.36□□□□□ -1.39
GARNL3-214ENST00000478696 P3H3Q8IVL6 736 aa6.35□□□□□ -1.39
GARNL3-214ENST00000478696 DPYSL4O14531 572 aa6.34□□□□□ -1.39
GARNL3-214ENST00000478696 ANO8Q9HCE9 1232 aaPredicted RBP6.34□□□□□ -1.39
GARNL3-214ENST00000478696 KDM4FA0A1W2PPD8 638 aa6.33□□□□□ -1.4
GARNL3-214ENST00000478696 SPDYE16A6NNV3 312 aaPredicted RBP6.33□□□□□ -1.4
GARNL3-214ENST00000478696 PBX2P40425 430 aa6.33□□□□□ -1.4
GARNL3-214ENST00000478696 ZNF454Q8N9F8 522 aa6.33□□□□□ -1.4
GARNL3-214ENST00000478696 VSIG10Q8N0Z9 540 aa6.32□□□□□ -1.4
GARNL3-214ENST00000478696 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
GARNL3-214ENST00000478696 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
GARNL3-214ENST00000478696 ARHGEF1Q92888 912 aaKnown RBP6.31□□□□□ -1.4
GARNL3-214ENST00000478696 ARIH1Q9Y4X5 557 aaPredicted RBP6.31□□□□□ -1.4
GARNL3-214ENST00000478696 JPH4Q96JJ6 628 aa6.3□□□□□ -1.4
GARNL3-214ENST00000478696 ARHGAP33O14559 1287 aa6.29□□□□□ -1.4
GARNL3-214ENST00000478696 PHF14O94880 888 aa6.29□□□□□ -1.4
GARNL3-214ENST00000478696 PDIA6Q15084 440 aa6.29□□□□□ -1.4
GARNL3-214ENST00000478696 FBXW7Q969H0 707 aa6.29□□□□□ -1.4
GARNL3-214ENST00000478696 ZDHHC16Q969W1 377 aa6.29□□□□□ -1.4
GARNL3-214ENST00000478696 FOSBP53539 338 aa6.28□□□□□ -1.4
GARNL3-214ENST00000478696 EPAS1Q99814 870 aa6.28□□□□□ -1.4
GARNL3-214ENST00000478696 PTPREP23469 700 aa6.27□□□□□ -1.41
GARNL3-214ENST00000478696 PTGER2P43116 358 aa6.27□□□□□ -1.41
GARNL3-214ENST00000478696 TYW1BQ6NUM6 668 aa6.27□□□□□ -1.41
GARNL3-214ENST00000478696 ANKRD13DQ6ZTN6 518 aa6.27□□□□□ -1.41
GARNL3-214ENST00000478696 KCNV2Q8TDN2 545 aa6.27□□□□□ -1.41
GARNL3-214ENST00000478696 GRXCR2A6NFK2 248 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 DDX12PQ92771 950 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 KCNK17Q96T54 332 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 KRTAP3-3Q9BYR6 98 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 BCL2L12Q9HB09 334 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 AXIN2Q9Y2T1 843 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 PCDHGA10Q9Y5H3 936 aa6.26□□□□□ -1.41
GARNL3-214ENST00000478696 LSM11P83369 360 aaKnown RBP eCLIP6.25□□□□□ -1.41
GARNL3-214ENST00000478696 STAC3Q96MF2 364 aa6.25□□□□□ -1.41
GARNL3-214ENST00000478696 PLSCR2Q9NRY7 297 aa6.25□□□□□ -1.41
GARNL3-214ENST00000478696 NBR1Q14596 966 aa6.24□□□□□ -1.41
GARNL3-214ENST00000478696 KDM2AQ9Y2K7 1162 aa6.24□□□□□ -1.41
GARNL3-214ENST00000478696 PSEN2P49810 448 aa6.23□□□□□ -1.41
GARNL3-214ENST00000478696 ADAM33Q9BZ11 813 aa6.23□□□□□ -1.41
GARNL3-214ENST00000478696 MAP3K7O43318 606 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms