RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.7
CYTH3-206ENST00000478541 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
CYTH3-206ENST00000478541 SCAPERQ9BY12 1400 aa25.69■■□□□ 1.7
CYTH3-206ENST00000478541 ARHGEF40Q8TER5 1519 aa25.68■■□□□ 1.7
CYTH3-206ENST00000478541 CDC42BPAQ5VT25 1732 aa25.67■■□□□ 1.7
CYTH3-206ENST00000478541 POGZQ7Z3K3 1410 aa25.67■■□□□ 1.7
CYTH3-206ENST00000478541 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
CYTH3-206ENST00000478541 ZFYVE16Q7Z3T8 1539 aa25.61■■□□□ 1.69
CYTH3-206ENST00000478541 ZNF518AQ6AHZ1 1483 aa25.59■■□□□ 1.69
CYTH3-206ENST00000478541 MTUS2Q5JR59 1369 aa25.58■■□□□ 1.69
CYTH3-206ENST00000478541 EHBP1L1Q8N3D4 1523 aa25.58■■□□□ 1.68
CYTH3-206ENST00000478541 KDM5CP41229 1560 aa25.57■■□□□ 1.68
CYTH3-206ENST00000478541 ADAMTSL3P82987 1691 aa25.57■■□□□ 1.68
CYTH3-206ENST00000478541 ABCC1P33527 1531 aa25.57■■□□□ 1.68
CYTH3-206ENST00000478541 BCORL1Q5H9F3 1711 aa25.57■■□□□ 1.68
CYTH3-206ENST00000478541 VPS8Q8N3P4 1428 aa25.56■■□□□ 1.68
CYTH3-206ENST00000478541 YEATS2Q9ULM3 1422 aa25.56■■□□□ 1.68
CYTH3-206ENST00000478541 GPATCH8Q9UKJ3 1502 aaKnown RBP25.56■■□□□ 1.68
CYTH3-206ENST00000478541 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
CYTH3-206ENST00000478541 ARHGEF12Q9NZN5 1544 aa25.51■■□□□ 1.67
CYTH3-206ENST00000478541 TIAM1Q13009 1591 aa25.51■■□□□ 1.67
CYTH3-206ENST00000478541 SAMD9LQ8IVG5 1584 aa25.5■■□□□ 1.67
CYTH3-206ENST00000478541 SIGLEC1Q9BZZ2 1709 aa25.5■■□□□ 1.67
CYTH3-206ENST00000478541 HECW2Q9P2P5 1572 aa25.5■■□□□ 1.67
CYTH3-206ENST00000478541 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
CYTH3-206ENST00000478541 AFAP1Q8N556 730 aa25.49■■□□□ 1.67
CYTH3-206ENST00000478541 ARID4BQ4LE39 1312 aaPredicted RBP25.48■■□□□ 1.67
CYTH3-206ENST00000478541 ATP10AO60312 1499 aa25.47■■□□□ 1.67
CYTH3-206ENST00000478541 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
CYTH3-206ENST00000478541 TRAPPC8Q9Y2L5 1435 aa25.46■■□□□ 1.67
CYTH3-206ENST00000478541 SUPT6HQ7KZ85 1726 aaKnown RBP25.45■■□□□ 1.66
CYTH3-206ENST00000478541 C9orf84Q5VXU9 1444 aa25.45■■□□□ 1.66
CYTH3-206ENST00000478541 MADDQ8WXG6 1647 aa25.45■■□□□ 1.66
CYTH3-206ENST00000478541 MAP3K1Q13233 1512 aa25.43■■□□□ 1.66
CYTH3-206ENST00000478541 PLEKHH2Q8IVE3 1493 aa25.43■■□□□ 1.66
CYTH3-206ENST00000478541 CFDP1Q9UEE9 299 aaPredicted RBP25.43■■□□□ 1.66
CYTH3-206ENST00000478541 DIP2CQ9Y2E4 1556 aa25.43■■□□□ 1.66
CYTH3-206ENST00000478541 KIAA1107Q9UPP5 1409 aa25.42■■□□□ 1.66
CYTH3-206ENST00000478541 REREQ9P2R6 1566 aa25.42■■□□□ 1.66
CYTH3-206ENST00000478541 SYCP2Q9BX26 1530 aa25.42■■□□□ 1.66
CYTH3-206ENST00000478541 PTPRMP28827 1452 aa25.41■■□□□ 1.66
CYTH3-206ENST00000478541 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
CYTH3-206ENST00000478541 ABCA6Q8N139 1617 aa25.41■■□□□ 1.66
CYTH3-206ENST00000478541 KIDINS220Q9ULH0 1771 aa25.39■■□□□ 1.66
CYTH3-206ENST00000478541 NCOA2Q15596 1464 aa25.39■■□□□ 1.65
CYTH3-206ENST00000478541 LRRC9Q6ZRR7 1453 aa25.38■■□□□ 1.65
CYTH3-206ENST00000478541 RIMS1Q86UR5 1692 aaKnown RBP25.36■■□□□ 1.65
CYTH3-206ENST00000478541 MYT1LQ9UL68 1186 aa25.34■■□□□ 1.65
CYTH3-206ENST00000478541 FER1L4A9Z1Z3 1794 aa25.33■■□□□ 1.65
CYTH3-206ENST00000478541 HNRNPMP52272 730 aaKnown RBP eCLIP25.33■■□□□ 1.65
CYTH3-206ENST00000478541 INO80Q9ULG1 1556 aaPredicted RBP25.31■■□□□ 1.64
CYTH3-206ENST00000478541 AGLP35573 1532 aa25.3■■□□□ 1.64
CYTH3-206ENST00000478541 MBD5Q9P267 1494 aa25.28■■□□□ 1.64
CYTH3-206ENST00000478541 ATP7AQ04656 1500 aa25.28■■□□□ 1.64
CYTH3-206ENST00000478541 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
CYTH3-206ENST00000478541 ZNF644Q9H582 1327 aaPredicted RBP25.28■■□□□ 1.64
CYTH3-206ENST00000478541 MLECQ14165 292 aa25.27■■□□□ 1.64
CYTH3-206ENST00000478541 KANK4Q5T7N3 995 aaPredicted RBP25.25■■□□□ 1.63
CYTH3-206ENST00000478541 CAMSAP2Q08AD1 1489 aa25.24■■□□□ 1.63
CYTH3-206ENST00000478541 PLXNC1O60486 1568 aa25.2■■□□□ 1.62
CYTH3-206ENST00000478541 RTEL1-TNFRSF6BF6WH68 1400 aa25.2■■□□□ 1.62
CYTH3-206ENST00000478541 ADGBQ8N7X0 1667 aa25.2■■□□□ 1.62
CYTH3-206ENST00000478541 APLP2Q06481 763 aa25.19■■□□□ 1.62
CYTH3-206ENST00000478541 CCDC141Q6ZP82 1450 aa25.19■■□□□ 1.62
CYTH3-206ENST00000478541 ARHGEF5Q12774 1597 aa25.18■■□□□ 1.62
CYTH3-206ENST00000478541 RSPH4AQ5TD94 716 aa25.18■■□□□ 1.62
CYTH3-206ENST00000478541 MYOM3Q5VTT5 1437 aa25.17■■□□□ 1.62
CYTH3-206ENST00000478541 MIA2Q96PC5 1412 aa25.16■■□□□ 1.62
CYTH3-206ENST00000478541 A2MP01023 1474 aa25.15■■□□□ 1.62
CYTH3-206ENST00000478541 LMTK3Q96Q04 1460 aa25.12■■□□□ 1.61
CYTH3-206ENST00000478541 C3P01024 1663 aa25.09■■□□□ 1.61
CYTH3-206ENST00000478541 CNTLNQ9NXG0 1405 aa25.08■■□□□ 1.61
CYTH3-206ENST00000478541 MROH2AA6NES4 1674 aa25.07■■□□□ 1.6
CYTH3-206ENST00000478541 MAST1Q9Y2H9 1570 aa25.06■■□□□ 1.6
CYTH3-206ENST00000478541 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
CYTH3-206ENST00000478541 PREX1Q8TCU6 1659 aa25.06■■□□□ 1.6
CYTH3-206ENST00000478541 ESF1Q9H501 851 aaKnown RBP25.05■■□□□ 1.6
CYTH3-206ENST00000478541 DHX29Q7Z478 1369 aaKnown RBP25.05■■□□□ 1.6
CYTH3-206ENST00000478541 TSPY4P0CV99 314 aa25.04■■□□□ 1.6
CYTH3-206ENST00000478541 TSPY10P0CW01 314 aa25.04■■□□□ 1.6
CYTH3-206ENST00000478541 CEBPAP49715 358 aaPredicted RBP25.03■■□□□ 1.6
CYTH3-206ENST00000478541 SETD1BQ9UPS6 1966 aaKnown RBP25.03■■□□□ 1.6
CYTH3-206ENST00000478541 PTPN23Q9H3S7 1636 aa25.02■■□□□ 1.6
CYTH3-206ENST00000478541 CLTCQ00610 1675 aaKnown RBP25■■□□□ 1.59
CYTH3-206ENST00000478541 PPP6R1Q9UPN7 881 aa24.99■■□□□ 1.59
CYTH3-206ENST00000478541 FGD6Q6ZV73 1430 aa24.98■■□□□ 1.59
CYTH3-206ENST00000478541 CROCC2H7BZ55 1655 aa24.97■■□□□ 1.59
CYTH3-206ENST00000478541 TCOF1Q13428 1488 aaKnown RBP24.97■■□□□ 1.59
CYTH3-206ENST00000478541 GGT6Q6P531 493 aa24.95■■□□□ 1.58
CYTH3-206ENST00000478541 ZMYM3Q14202 1370 aa24.94■■□□□ 1.58
CYTH3-206ENST00000478541 FAM135AQ9P2D6 1515 aa24.94■■□□□ 1.58
CYTH3-206ENST00000478541 SHANK2Q9UPX8 1470 aa24.94■■□□□ 1.58
CYTH3-206ENST00000478541 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
CYTH3-206ENST00000478541 DNMT1P26358 1616 aaKnown RBP24.93■■□□□ 1.58
CYTH3-206ENST00000478541 NPATQ14207 1427 aa24.92■■□□□ 1.58
CYTH3-206ENST00000478541 EIF2AK4Q9P2K8 1649 aaKnown RBP24.9■■□□□ 1.58
CYTH3-206ENST00000478541 ABCC5O15440 1437 aa24.9■■□□□ 1.58
CYTH3-206ENST00000478541 KIF3BO15066 747 aa24.9■■□□□ 1.58
CYTH3-206ENST00000478541 HSPA2P54652 639 aa24.9■■□□□ 1.58
CYTH3-206ENST00000478541 DAPK1P53355 1430 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms