RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
NECTIN3-204ENST00000478327 TMEM121BQ9BXQ6 578 aaPredicted RBP9.82□□□□□ -0.84
NECTIN3-204ENST00000478327 CRISPLD2Q9H0B8 497 aa9.82□□□□□ -0.84
NECTIN3-204ENST00000478327 MFSD10Q14728 455 aa9.81□□□□□ -0.84
NECTIN3-204ENST00000478327 DPY19L2Q6NUT2 758 aa9.81□□□□□ -0.84
NECTIN3-204ENST00000478327 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
NECTIN3-204ENST00000478327 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
NECTIN3-204ENST00000478327 NCKAP5LQ9HCH0 1330 aa9.8□□□□□ -0.84
NECTIN3-204ENST00000478327 G3V3G9 751 aa9.79□□□□□ -0.84
NECTIN3-204ENST00000478327 NBR1Q14596 966 aa9.76□□□□□ -0.85
NECTIN3-204ENST00000478327 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
NECTIN3-204ENST00000478327 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
NECTIN3-204ENST00000478327 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
NECTIN3-204ENST00000478327 E2F4Q16254 413 aa9.74□□□□□ -0.85
NECTIN3-204ENST00000478327 C3orf67Q6ZVT6 689 aa9.74□□□□□ -0.85
NECTIN3-204ENST00000478327 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.74□□□□□ -0.85
NECTIN3-204ENST00000478327 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
NECTIN3-204ENST00000478327 TMC2Q8TDI7 906 aa9.71□□□□□ -0.86
NECTIN3-204ENST00000478327 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
NECTIN3-204ENST00000478327 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
NECTIN3-204ENST00000478327 SLAIN1Q8ND83 568 aa9.7□□□□□ -0.86
NECTIN3-204ENST00000478327 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
NECTIN3-204ENST00000478327 PPP1R15BQ5SWA1 713 aa9.69□□□□□ -0.86
NECTIN3-204ENST00000478327 KIF3CO14782 793 aa9.68□□□□□ -0.86
NECTIN3-204ENST00000478327 FOXK1P85037 733 aa9.68□□□□□ -0.86
NECTIN3-204ENST00000478327 C2orf72A6NCS6 295 aa9.64□□□□□ -0.87
NECTIN3-204ENST00000478327 DSG2Q14126 1118 aa9.64□□□□□ -0.87
NECTIN3-204ENST00000478327 TMEM92Q6UXU6 159 aa9.61□□□□□ -0.87
NECTIN3-204ENST00000478327 SNPHO15079 494 aa9.6□□□□□ -0.87
NECTIN3-204ENST00000478327 PLPP6Q8IY26 295 aa9.6□□□□□ -0.87
NECTIN3-204ENST00000478327 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
NECTIN3-204ENST00000478327 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
NECTIN3-204ENST00000478327 SPDYE16A6NNV3 312 aaPredicted RBP9.55□□□□□ -0.88
NECTIN3-204ENST00000478327 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
NECTIN3-204ENST00000478327 TESPA1A2RU30 521 aaPredicted RBP9.53□□□□□ -0.88
NECTIN3-204ENST00000478327 SLC34A2O95436 690 aa9.52□□□□□ -0.89
NECTIN3-204ENST00000478327 PDIA6Q15084 440 aa9.52□□□□□ -0.89
NECTIN3-204ENST00000478327 DPYSL4O14531 572 aa9.51□□□□□ -0.89
NECTIN3-204ENST00000478327 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
NECTIN3-204ENST00000478327 OXER1Q8TDS5 423 aa9.51□□□□□ -0.89
NECTIN3-204ENST00000478327 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
NECTIN3-204ENST00000478327 SEMA3EO15041 775 aa9.49□□□□□ -0.89
NECTIN3-204ENST00000478327 ST18O60284 1047 aa9.49□□□□□ -0.89
NECTIN3-204ENST00000478327 HOXB3P14651 431 aaPredicted RBP9.49□□□□□ -0.89
NECTIN3-204ENST00000478327 DOK7Q18PE1 504 aa9.49□□□□□ -0.89
NECTIN3-204ENST00000478327 MAP3K9P80192 1104 aa9.48□□□□□ -0.89
NECTIN3-204ENST00000478327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
NECTIN3-204ENST00000478327 PTCD2Q8WV60 388 aaKnown RBP9.48□□□□□ -0.89
NECTIN3-204ENST00000478327 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
NECTIN3-204ENST00000478327 POTEMA6NI47 508 aa9.46□□□□□ -0.9
NECTIN3-204ENST00000478327 TBC1D12O60347 775 aa9.46□□□□□ -0.9
NECTIN3-204ENST00000478327 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
NECTIN3-204ENST00000478327 ZSWIM6Q9HCJ5 1215 aa9.46□□□□□ -0.9
NECTIN3-204ENST00000478327 RIMBP2O15034 1052 aa9.45□□□□□ -0.9
NECTIN3-204ENST00000478327 POTEGQ6S5H5 508 aa9.45□□□□□ -0.9
NECTIN3-204ENST00000478327 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
NECTIN3-204ENST00000478327 UPF1Q92900 1129 aaKnown RBP eCLIP9.44□□□□□ -0.9
NECTIN3-204ENST00000478327 PTGER2P43116 358 aa9.42□□□□□ -0.9
NECTIN3-204ENST00000478327 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
NECTIN3-204ENST00000478327 ZNF710Q8N1W2 664 aa9.41□□□□□ -0.9
NECTIN3-204ENST00000478327 EVI5O60447 810 aa9.39□□□□□ -0.91
NECTIN3-204ENST00000478327 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
NECTIN3-204ENST00000478327 ANO8Q9HCE9 1232 aaPredicted RBP9.39□□□□□ -0.91
NECTIN3-204ENST00000478327 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
NECTIN3-204ENST00000478327 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
NECTIN3-204ENST00000478327 PCDHGA4Q9Y5G9 962 aa9.38□□□□□ -0.91
NECTIN3-204ENST00000478327 GPR153Q6NV75 609 aa9.36□□□□□ -0.91
NECTIN3-204ENST00000478327 EMP3P54852 163 aa9.35□□□□□ -0.91
NECTIN3-204ENST00000478327 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
NECTIN3-204ENST00000478327 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
NECTIN3-204ENST00000478327 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
NECTIN3-204ENST00000478327 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
NECTIN3-204ENST00000478327 PHF14O94880 888 aa9.31□□□□□ -0.92
NECTIN3-204ENST00000478327 EPAS1Q99814 870 aa9.31□□□□□ -0.92
NECTIN3-204ENST00000478327 OSBPP22059 807 aa9.3□□□□□ -0.92
NECTIN3-204ENST00000478327 RBM26Q5T8P6 1007 aaKnown RBP9.3□□□□□ -0.92
NECTIN3-204ENST00000478327 GPIHBP1Q8IV16 184 aa9.3□□□□□ -0.92
NECTIN3-204ENST00000478327 DDX12PQ92771 950 aa9.29□□□□□ -0.92
NECTIN3-204ENST00000478327 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
NECTIN3-204ENST00000478327 JPH4Q96JJ6 628 aa9.28□□□□□ -0.92
NECTIN3-204ENST00000478327 HS3ST6Q96QI5 342 aa9.28□□□□□ -0.92
NECTIN3-204ENST00000478327 ZMYND10O75800 440 aa9.27□□□□□ -0.93
NECTIN3-204ENST00000478327 FAM205CA6NFA0 338 aa9.26□□□□□ -0.93
NECTIN3-204ENST00000478327 CDAN1Q8IWY9 1227 aa9.26□□□□□ -0.93
NECTIN3-204ENST00000478327 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
NECTIN3-204ENST00000478327 TYW1BQ6NUM6 668 aa9.25□□□□□ -0.93
NECTIN3-204ENST00000478327 ERBB3P21860 1342 aa9.25□□□□□ -0.93
NECTIN3-204ENST00000478327 PSDA5PKW4 1024 aaPredicted RBP9.24□□□□□ -0.93
NECTIN3-204ENST00000478327 NUDT7P0C024 238 aa9.24□□□□□ -0.93
NECTIN3-204ENST00000478327 FOSBP53539 338 aa9.24□□□□□ -0.93
NECTIN3-204ENST00000478327 EN1Q05925 392 aaPredicted RBP9.24□□□□□ -0.93
NECTIN3-204ENST00000478327 BARGINQ6ZT62 677 aa9.24□□□□□ -0.93
NECTIN3-204ENST00000478327 PCDHGA10Q9Y5H3 936 aa9.24□□□□□ -0.93
NECTIN3-204ENST00000478327 POTEB3A0JP26 581 aa9.23□□□□□ -0.93
NECTIN3-204ENST00000478327 GPR37O15354 613 aa9.23□□□□□ -0.93
NECTIN3-204ENST00000478327 POTEBQ6S5H4 581 aa9.23□□□□□ -0.93
NECTIN3-204ENST00000478327 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.93
NECTIN3-204ENST00000478327 NUTM2FA1L443 756 aa9.21□□□□□ -0.94
NECTIN3-204ENST00000478327 FCHSD2O94868 740 aa9.21□□□□□ -0.94
NECTIN3-204ENST00000478327 VARS2Q5ST30 1063 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms