RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 RIMS1Q86UR5 1692 aaKnown RBP21.41■■□□□ 1.02
ABCF3-212ENST00000478288 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
ABCF3-212ENST00000478288 YEATS2Q9ULM3 1422 aa21.4■■□□□ 1.02
ABCF3-212ENST00000478288 SIGLEC1Q9BZZ2 1709 aa21.4■■□□□ 1.02
ABCF3-212ENST00000478288 PCF11O94913 1555 aaKnown RBP21.4■■□□□ 1.02
ABCF3-212ENST00000478288 CLIP1P30622 1438 aa21.39■■□□□ 1.02
ABCF3-212ENST00000478288 EFCAB2Q5VUJ9 269 aa21.37■■□□□ 1.01
ABCF3-212ENST00000478288 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
ABCF3-212ENST00000478288 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
ABCF3-212ENST00000478288 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
ABCF3-212ENST00000478288 LMTK3Q96Q04 1460 aa21.36■■□□□ 1.01
ABCF3-212ENST00000478288 ZNF518AQ6AHZ1 1483 aa21.35■■□□□ 1.01
ABCF3-212ENST00000478288 CASKIN1Q8WXD9 1431 aa21.35■■□□□ 1.01
ABCF3-212ENST00000478288 KDM5CP41229 1560 aa21.35■■□□□ 1.01
ABCF3-212ENST00000478288 FER1L4A9Z1Z3 1794 aa21.34■■□□□ 1.01
ABCF3-212ENST00000478288 ATP10AO60312 1499 aa21.33■■□□□ 1.01
ABCF3-212ENST00000478288 ARHGAP5Q13017 1502 aa21.33■■□□□ 1
ABCF3-212ENST00000478288 C9orf84Q5VXU9 1444 aa21.32■■□□□ 1
ABCF3-212ENST00000478288 CDC42BPBQ9Y5S2 1711 aa21.32■■□□□ 1
ABCF3-212ENST00000478288 ARHGEF12Q9NZN5 1544 aa21.3■■□□□ 1
ABCF3-212ENST00000478288 PREX2Q70Z35 1606 aa21.3■■□□□ 1
ABCF3-212ENST00000478288 FYCO1Q9BQS8 1478 aa21.28■■□□□ 1
ABCF3-212ENST00000478288 REREQ9P2R6 1566 aa21.27■■□□□ 1
ABCF3-212ENST00000478288 ABCC1P33527 1531 aa21.24■□□□□ 0.99
ABCF3-212ENST00000478288 MLH3Q9UHC1 1453 aa21.24■□□□□ 0.99
ABCF3-212ENST00000478288 DIP2CQ9Y2E4 1556 aa21.23■□□□□ 0.99
ABCF3-212ENST00000478288 CDC42BPAQ5VT25 1732 aa21.23■□□□□ 0.99
ABCF3-212ENST00000478288 ITSN2Q9NZM3 1697 aa21.22■□□□□ 0.99
ABCF3-212ENST00000478288 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
ABCF3-212ENST00000478288 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
ABCF3-212ENST00000478288 SETD1BQ9UPS6 1966 aaKnown RBP21.19■□□□□ 0.98
ABCF3-212ENST00000478288 PREX1Q8TCU6 1659 aa21.18■□□□□ 0.98
ABCF3-212ENST00000478288 MLECQ14165 292 aa21.18■□□□□ 0.98
ABCF3-212ENST00000478288 AGLP35573 1532 aa21.18■□□□□ 0.98
ABCF3-212ENST00000478288 FBXO41Q8TF61 875 aa21.17■□□□□ 0.98
ABCF3-212ENST00000478288 TRAPPC8Q9Y2L5 1435 aa21.15■□□□□ 0.98
ABCF3-212ENST00000478288 KIDINS220Q9ULH0 1771 aa21.14■□□□□ 0.97
ABCF3-212ENST00000478288 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
ABCF3-212ENST00000478288 HSPA2P54652 639 aa21.11■□□□□ 0.97
ABCF3-212ENST00000478288 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
ABCF3-212ENST00000478288 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
ABCF3-212ENST00000478288 MYT1LQ9UL68 1186 aa21.08■□□□□ 0.97
ABCF3-212ENST00000478288 C3P01024 1663 aa21.07■□□□□ 0.96
ABCF3-212ENST00000478288 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
ABCF3-212ENST00000478288 PLEKHH2Q8IVE3 1493 aa21.07■□□□□ 0.96
ABCF3-212ENST00000478288 KIAA1107Q9UPP5 1409 aa21.06■□□□□ 0.96
ABCF3-212ENST00000478288 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
ABCF3-212ENST00000478288 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
ABCF3-212ENST00000478288 INO80Q9ULG1 1556 aaPredicted RBP21.02■□□□□ 0.96
ABCF3-212ENST00000478288 CEBPAP49715 358 aaPredicted RBP21.02■□□□□ 0.96
ABCF3-212ENST00000478288 MROH2AA6NES4 1674 aa21.02■□□□□ 0.95
ABCF3-212ENST00000478288 STRCQ7RTU9 1775 aa21.01■□□□□ 0.95
ABCF3-212ENST00000478288 CCNB3Q8WWL7 1395 aa21■□□□□ 0.95
ABCF3-212ENST00000478288 ATP7AQ04656 1500 aa21■□□□□ 0.95
ABCF3-212ENST00000478288 PLXNC1O60486 1568 aa21■□□□□ 0.95
ABCF3-212ENST00000478288 EHBP1L1Q8N3D4 1523 aa20.99■□□□□ 0.95
ABCF3-212ENST00000478288 MTUS2Q5JR59 1369 aa20.99■□□□□ 0.95
ABCF3-212ENST00000478288 SPAG9O60271 1321 aaKnown RBP20.99■□□□□ 0.95
ABCF3-212ENST00000478288 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
ABCF3-212ENST00000478288 ZNF777Q9ULD5 760 aaPredicted RBP20.98■□□□□ 0.95
ABCF3-212ENST00000478288 ESF1Q9H501 851 aaKnown RBP20.97■□□□□ 0.95
ABCF3-212ENST00000478288 TIAM1Q13009 1591 aa20.97■□□□□ 0.95
ABCF3-212ENST00000478288 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
ABCF3-212ENST00000478288 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
ABCF3-212ENST00000478288 NPATQ14207 1427 aa20.95■□□□□ 0.94
ABCF3-212ENST00000478288 CEP162Q5TB80 1403 aa20.95■□□□□ 0.94
ABCF3-212ENST00000478288 HNRNPMP52272 730 aaKnown RBP eCLIP20.94■□□□□ 0.94
ABCF3-212ENST00000478288 ADGBQ8N7X0 1667 aa20.93■□□□□ 0.94
ABCF3-212ENST00000478288 A2MP01023 1474 aa20.93■□□□□ 0.94
ABCF3-212ENST00000478288 CERKQ8TCT0 537 aa20.92■□□□□ 0.94
ABCF3-212ENST00000478288 PTPRTO14522 1441 aa20.9■□□□□ 0.94
ABCF3-212ENST00000478288 MBD5Q9P267 1494 aa20.89■□□□□ 0.94
ABCF3-212ENST00000478288 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
ABCF3-212ENST00000478288 ZMYM3Q14202 1370 aa20.87■□□□□ 0.93
ABCF3-212ENST00000478288 CLTCQ00610 1675 aaKnown RBP20.87■□□□□ 0.93
ABCF3-212ENST00000478288 NCOA1Q15788 1441 aa20.86■□□□□ 0.93
ABCF3-212ENST00000478288 PPP6R1Q9UPN7 881 aa20.85■□□□□ 0.93
ABCF3-212ENST00000478288 ZNF142P52746 1687 aaPredicted RBP20.85■□□□□ 0.93
ABCF3-212ENST00000478288 NCOA2Q15596 1464 aa20.82■□□□□ 0.92
ABCF3-212ENST00000478288 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
ABCF3-212ENST00000478288 MYO3AQ8NEV4 1616 aa20.82■□□□□ 0.92
ABCF3-212ENST00000478288 FAM135AQ9P2D6 1515 aa20.81■□□□□ 0.92
ABCF3-212ENST00000478288 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
ABCF3-212ENST00000478288 PTPRKQ15262 1439 aa20.8■□□□□ 0.92
ABCF3-212ENST00000478288 CAMSAP1Q5T5Y3 1602 aa20.8■□□□□ 0.92
ABCF3-212ENST00000478288 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
ABCF3-212ENST00000478288 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
ABCF3-212ENST00000478288 DHX29Q7Z478 1369 aaKnown RBP20.78■□□□□ 0.92
ABCF3-212ENST00000478288 RSPH4AQ5TD94 716 aa20.78■□□□□ 0.92
ABCF3-212ENST00000478288 ARHGEF5Q12774 1597 aa20.77■□□□□ 0.92
ABCF3-212ENST00000478288 CEP170BQ9Y4F5 1589 aaPredicted RBP20.77■□□□□ 0.92
ABCF3-212ENST00000478288 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
ABCF3-212ENST00000478288 LTBP4Q8N2S1 1624 aa20.76■□□□□ 0.91
ABCF3-212ENST00000478288 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
ABCF3-212ENST00000478288 GGT6Q6P531 493 aa20.75■□□□□ 0.91
ABCF3-212ENST00000478288 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
ABCF3-212ENST00000478288 LRRC9Q6ZRR7 1453 aa20.73■□□□□ 0.91
ABCF3-212ENST00000478288 TCOF1Q13428 1488 aaKnown RBP20.72■□□□□ 0.91
ABCF3-212ENST00000478288 KDM5DQ9BY66 1539 aa20.72■□□□□ 0.91
ABCF3-212ENST00000478288 PKD2Q13563 968 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms